Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01400

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,463,913	+				+0.2
1,464,009	+				+1.5
1,464,009	+				-1.5
1,464,010	-				-0.9
1,464,010	-				+0.5
1,464,010	-				-1.7
1,464,010	-				-0.3
1,464,897	+				+0.2
1,464,897	+				-0.5
1,464,898	-				-0.4
1,464,898	-				+1.5
1,464,898	-				-0.7
1,464,898	-				-0.3
1,464,898	-				-1.2
1,464,898	-				+1.7
1,464,898	-				+1.2
1,464,922	+				+1.5
1,464,922	+				+0.9
1,464,923	-				+0.5
1,464,923	-				+1.5
1,464,923	-				+0.5
1,464,985	-		MPMX19_01400	0.18	-1.5
1,464,985	-		MPMX19_01400	0.18	-1.3
1,464,985	-		MPMX19_01400	0.18	+0.3
1,464,985	-		MPMX19_01400	0.18	-0.8
1,465,090	+		MPMX19_01400	0.38	-0.5
1,465,090	+		MPMX19_01400	0.38	+1.5
1,465,090	+		MPMX19_01400	0.38	+3.5
1,465,090	+		MPMX19_01400	0.38	+0.5
1,465,090	+		MPMX19_01400	0.38	+2.1
1,465,090	+		MPMX19_01400	0.38	+0.5
1,465,090	+		MPMX19_01400	0.38	+3.5
1,465,090	+		MPMX19_01400	0.38	+0.5
1,465,090	+		MPMX19_01400	0.38	+0.5
1,465,091	-		MPMX19_01400	0.39	-0.5
1,465,091	-		MPMX19_01400	0.39	+2.5
1,465,091	-		MPMX19_01400	0.39	-1.1
1,465,091	-		MPMX19_01400	0.39	-0.8
1,465,091	-		MPMX19_01400	0.39	-0.5
1,465,091	-		MPMX19_01400	0.39	-1.8
1,465,245	+		MPMX19_01400	0.69	-0.8
1,465,245	+		MPMX19_01400	0.69	-0.5
1,465,245	+		MPMX19_01400	0.69	-1.1
1,465,246	-		MPMX19_01400	0.69	+2.5
1,465,246	-		MPMX19_01400	0.69	-1.3
1,465,425	-				-0.5
1,465,843	+		MPMX19_01401	0.59	-0.5
1,465,843	+		MPMX19_01401	0.59	+1.9
1,465,844	-		MPMX19_01401	0.59	+0.3
1,465,844	-		MPMX19_01401	0.59	+0.9
1,465,844	-		MPMX19_01401	0.59	-0.8
1,465,844	-		MPMX19_01401	0.59	+0.5
1,466,015	-				+0.7
1,466,028	+				+0.5
1,466,029	-				-0.4
1,466,029	-				+0.2
1,466,029	-				-0.9
1,466,029	-				+0.5
1,466,098	+				-0.9
1,466,098	+				-0.1
1,466,098	+				-0.1
1,466,098	+				-0.1
1,466,098	+				+0.4
1,466,098	+				+1.1
1,466,098	+				-1.3
1,466,099	-				-2.2
1,466,099	-				-0.4
1,466,099	-				+0.7
1,466,099	-				-0.1
1,466,099	-				-1.2
1,466,099	-				-0.2