Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01344

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,397,779	+		MPMX19_01343	0.60	-0.7
1,397,779	+		MPMX19_01343	0.60	+1.3
1,397,779	+		MPMX19_01343	0.60	-0.5
1,397,779	+		MPMX19_01343	0.60	-1.0
1,397,780	-		MPMX19_01343	0.60	+0.5
1,397,780	-		MPMX19_01343	0.60	+0.1
1,397,780	-		MPMX19_01343	0.60	-1.3
1,397,780	-		MPMX19_01343	0.60	+1.2
1,397,780	-		MPMX19_01343	0.60	+0.8
1,397,780	-		MPMX19_01343	0.60	-0.3
1,397,780	-		MPMX19_01343	0.60	-0.1
1,397,781	+		MPMX19_01343	0.60	+2.3
1,397,781	+		MPMX19_01343	0.60	-0.7
1,397,781	+		MPMX19_01343	0.60	-1.1
1,397,781	+		MPMX19_01343	0.60	+0.8
1,397,781	+		MPMX19_01343	0.60	+0.3
1,397,781	+		MPMX19_01343	0.60	-1.1
1,397,781	+		MPMX19_01343	0.60	+0.1
1,397,781	+		MPMX19_01343	0.60	-0.6
1,397,781	+		MPMX19_01343	0.60	+0.8
1,397,781	+		MPMX19_01343	0.60	-0.1
1,397,782	-		MPMX19_01343	0.60	+0.2
1,397,782	-		MPMX19_01343	0.60	-0.6
1,397,782	-		MPMX19_01343	0.60	-0.1
1,397,782	-		MPMX19_01343	0.60	+1.0
1,397,782	-		MPMX19_01343	0.60	-1.3
1,397,782	-		MPMX19_01343	0.60	-1.3
1,397,782	-		MPMX19_01343	0.60	+1.5
1,397,782	-		MPMX19_01343	0.60	-0.5
1,397,782	-		MPMX19_01343	0.60	-0.1
1,397,782	-		MPMX19_01343	0.60	-1.8
1,397,782	-		MPMX19_01343	0.60	-1.3
1,397,788	+		MPMX19_01343	0.61	-0.9
1,397,788	+		MPMX19_01343	0.61	-1.3
1,397,789	-		MPMX19_01343	0.61	-0.7
1,397,789	-		MPMX19_01343	0.61	-0.3
1,397,789	-		MPMX19_01343	0.61	+0.4
1,397,789	-		MPMX19_01343	0.61	+1.2
1,397,790	+		MPMX19_01343	0.61	+0.2
1,397,790	+		MPMX19_01343	0.61	+0.9
1,397,790	+		MPMX19_01343	0.61	-2.0
1,397,790	+		MPMX19_01343	0.61	-0.2
1,397,791	-		MPMX19_01343	0.61	+0.1
1,397,791	-		MPMX19_01343	0.61	-1.1
1,397,791	-		MPMX19_01343	0.61	+1.0
1,397,791	-		MPMX19_01343	0.61	-2.2
1,397,791	-		MPMX19_01343	0.61	-0.7
1,397,791	-		MPMX19_01343	0.61	+1.5
1,397,791	-		MPMX19_01343	0.61	-1.5
1,397,791	-		MPMX19_01343	0.61	-0.5
1,397,791	-		MPMX19_01343	0.61	-0.1
1,397,791	-		MPMX19_01343	0.61	-1.1
1,397,791	-		MPMX19_01343	0.61	+0.3
1,397,791	-		MPMX19_01343	0.61	+0.8
1,397,791	-		MPMX19_01343	0.61	-0.1
1,397,791	-		MPMX19_01343	0.61	-0.0
1,397,791	-		MPMX19_01343	0.61	-0.1
1,397,791	-		MPMX19_01343	0.61	-1.2
1,397,791	-		MPMX19_01343	0.61	-0.8
1,397,832	+		MPMX19_01343	0.64	-1.1
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-0.7
1,397,832	+		MPMX19_01343	0.64	-1.0
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	-1.8
1,397,832	+		MPMX19_01343	0.64	+0.0
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-0.8
1,397,832	+		MPMX19_01343	0.64	-1.7
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-0.0
1,397,832	+		MPMX19_01343	0.64	-1.1
1,397,832	+		MPMX19_01343	0.64	+0.7
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	+0.5
1,397,832	+		MPMX19_01343	0.64	+0.5
1,397,832	+		MPMX19_01343	0.64	+1.0
1,397,832	+		MPMX19_01343	0.64	+0.4
1,397,832	+		MPMX19_01343	0.64	+1.3
1,397,832	+		MPMX19_01343	0.64	-0.5
1,397,832	+		MPMX19_01343	0.64	+0.6
1,397,832	+		MPMX19_01343	0.64	-1.8
1,397,832	+		MPMX19_01343	0.64	-1.3
1,397,832	+		MPMX19_01343	0.64	+1.2
1,397,832	+		MPMX19_01343	0.64	-0.4
1,397,832	+		MPMX19_01343	0.64	-0.6
1,397,832	+		MPMX19_01343	0.64	-0.6
1,397,832	+		MPMX19_01343	0.64	-0.3
1,397,832	+		MPMX19_01343	0.64	+0.8
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	-2.0
1,397,832	+		MPMX19_01343	0.64	-0.1
1,397,832	+		MPMX19_01343	0.64	-1.3
1,397,832	+		MPMX19_01343	0.64	+1.5
1,397,832	+		MPMX19_01343	0.64	-0.0
1,397,832	+		MPMX19_01343	0.64	+0.8
1,397,832	+		MPMX19_01343	0.64	+0.0
1,397,832	+		MPMX19_01343	0.64	-0.2
1,397,832	+		MPMX19_01343	0.64	-1.7
1,397,832	+		MPMX19_01343	0.64	-0.0
1,397,832	+		MPMX19_01343	0.64	-1.3
1,397,832	+		MPMX19_01343	0.64	-0.8
1,397,832	+		MPMX19_01343	0.64	+0.2
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-0.9
1,397,833	-		MPMX19_01343	0.64	+0.3
1,397,833	-		MPMX19_01343	0.64	+0.3
1,397,833	-		MPMX19_01343	0.64	+1.6
1,397,833	-		MPMX19_01343	0.64	+0.7
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	+0.5
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	+0.5
1,397,833	-		MPMX19_01343	0.64	-1.3
1,397,833	-		MPMX19_01343	0.64	-0.6
1,397,833	-		MPMX19_01343	0.64	+0.1
1,397,833	-		MPMX19_01343	0.64	+0.1
1,397,833	-		MPMX19_01343	0.64	-1.1
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-1.1
1,397,833	-		MPMX19_01343	0.64	-1.1
1,397,833	-		MPMX19_01343	0.64	-0.2
1,397,833	-		MPMX19_01343	0.64	-0.6
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-0.4
1,397,833	-		MPMX19_01343	0.64	+0.5
1,397,833	-		MPMX19_01343	0.64	-1.8
1,397,833	-		MPMX19_01343	0.64	-0.3
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	-0.6
1,397,833	-		MPMX19_01343	0.64	+0.7
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-0.7
1,397,833	-		MPMX19_01343	0.64	+0.8
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	+0.8
1,397,833	-		MPMX19_01343	0.64	-0.2
1,397,833	-		MPMX19_01343	0.64	-0.2
1,397,833	-		MPMX19_01343	0.64	-0.1
1,397,833	-		MPMX19_01343	0.64	-0.3
1,397,833	-		MPMX19_01343	0.64	-0.5
1,397,833	-		MPMX19_01343	0.64	-0.4
1,397,833	-		MPMX19_01343	0.64	-1.0
1,397,833	-		MPMX19_01343	0.64	+0.5
1,397,833	-		MPMX19_01343	0.64	+0.9
1,397,953	-		MPMX19_01343	0.72	-1.0
1,397,953	-		MPMX19_01343	0.72	+0.7
1,397,953	-		MPMX19_01343	0.72	+0.7
1,397,953	-		MPMX19_01343	0.72	-0.4
1,397,953	-		MPMX19_01343	0.72	+0.1
1,397,953	-		MPMX19_01343	0.72	-1.7
1,397,959	-		MPMX19_01343	0.72	+0.2
1,397,959	-		MPMX19_01343	0.72	-1.3
1,397,959	-		MPMX19_01343	0.72	-1.0
1,397,959	-		MPMX19_01343	0.72	-1.3
1,397,959	-		MPMX19_01343	0.72	+0.7
1,397,959	-		MPMX19_01343	0.72	-1.2
1,398,060	+		MPMX19_01343	0.79	+1.5
1,398,060	+		MPMX19_01343	0.79	+1.2
1,398,060	+		MPMX19_01343	0.79	+0.7
1,398,060	+		MPMX19_01343	0.79	-0.7
1,398,060	+		MPMX19_01343	0.79	-1.5
1,398,060	+		MPMX19_01343	0.79	-0.8
1,398,060	+		MPMX19_01343	0.79	-1.5
1,398,060	+		MPMX19_01343	0.79	-1.2
1,398,061	-		MPMX19_01343	0.79	+0.3
1,398,061	-		MPMX19_01343	0.79	+0.2
1,398,061	-		MPMX19_01343	0.79	+0.4
1,398,061	-		MPMX19_01343	0.79	-1.0
1,398,061	-		MPMX19_01343	0.79	-0.3
1,398,061	-		MPMX19_01343	0.79	-0.7
1,398,061	-		MPMX19_01343	0.79	+0.2
1,398,061	-		MPMX19_01343	0.79	-0.8
1,398,358	+				-0.1
1,398,358	+				-0.8
1,398,358	+				-0.9
1,398,359	-				+0.8
1,398,368	+				+1.1
1,398,369	-				-0.1
1,398,377	+				+0.3
1,398,377	+				-0.8
1,398,377	+				+1.2
1,398,377	+				-0.6
1,398,377	+				+0.3
1,398,377	+				-0.6
1,398,377	+				+1.8
1,398,378	-				-0.5
1,398,378	-				-0.3
1,398,378	-				-0.3
1,398,378	-				-0.8
1,398,378	-				+0.3
1,398,378	-				-0.4
1,398,378	-				+0.5
1,398,378	-				+0.2
1,398,378	-				-1.8
1,398,378	-				-0.0
1,398,378	-				-0.4
1,398,378	-				+1.5
1,398,378	-				-1.1
1,398,378	-				-0.1
1,398,402	+				-1.4
1,398,402	+				-0.4
1,398,402	+				-1.5
1,398,402	+				-0.5
1,398,402	+				+0.1
1,398,402	+				+2.5
1,398,402	+				-1.5
1,398,402	+				+2.2
1,398,402	+				-1.7
1,398,402	+				-0.2
1,398,403	-				-0.8
1,398,403	-				+0.1
1,398,403	-				+0.9
1,398,403	-				+0.5
1,398,403	-				+0.1
1,398,403	-				-0.9
1,398,403	-				-0.6
1,398,403	-				+0.4
1,398,403	-				-0.6
1,398,403	-				-1.0
1,398,715	+		MPMX19_01344	0.58	-1.5
1,398,715	+		MPMX19_01344	0.58	-0.7
1,398,715	+		MPMX19_01344	0.58	-0.6
1,398,715	+		MPMX19_01344	0.58	-1.7
1,398,716	-		MPMX19_01344	0.58	+0.5
1,398,716	-		MPMX19_01344	0.58	-0.7
1,398,716	-		MPMX19_01344	0.58	-0.7
1,398,716	-		MPMX19_01344	0.58	+0.5
1,398,716	-		MPMX19_01344	0.58	-2.0
1,398,736	+		MPMX19_01344	0.62	+0.2
1,398,736	+		MPMX19_01344	0.62	-1.1
1,398,736	+		MPMX19_01344	0.62	-0.9
1,398,736	+		MPMX19_01344	0.62	-0.9
1,398,736	+		MPMX19_01344	0.62	-0.9
1,398,736	+		MPMX19_01344	0.62	-0.8
1,398,737	-		MPMX19_01344	0.62	-0.7
1,398,737	-		MPMX19_01344	0.62	+0.8
1,398,737	-		MPMX19_01344	0.62	-1.7
1,398,737	-		MPMX19_01344	0.62	+0.9
1,398,737	-		MPMX19_01344	0.62	+1.1
1,398,737	-		MPMX19_01344	0.62	-0.6
1,398,737	-		MPMX19_01344	0.62	-2.3
1,398,737	-		MPMX19_01344	0.62	+0.1
1,398,774	+		MPMX19_01344	0.69	-0.1
1,398,774	+		MPMX19_01344	0.69	-0.2
1,398,774	+		MPMX19_01344	0.69	-1.2
1,398,774	+		MPMX19_01344	0.69	-1.3
1,398,774	+		MPMX19_01344	0.69	+1.3
1,398,774	+		MPMX19_01344	0.69	-1.4
1,398,775	-		MPMX19_01344	0.69	-0.8
1,398,775	-		MPMX19_01344	0.69	-0.9
1,398,775	-		MPMX19_01344	0.69	-1.2
1,398,775	-		MPMX19_01344	0.69	-0.4
1,398,775	-		MPMX19_01344	0.69	-2.1
1,398,775	-		MPMX19_01344	0.69	+0.1
1,398,775	-		MPMX19_01344	0.69	+0.5
1,398,775	-		MPMX19_01344	0.69	-0.1
1,398,775	-		MPMX19_01344	0.69	-0.3
1,398,819	+		MPMX19_01344	0.77	-1.7
1,398,819	+		MPMX19_01344	0.77	-1.3
1,398,920	+				+0.0
1,398,920	+				-0.5
1,398,920	+				-0.5
1,398,921	-				-1.1
1,398,921	-				+0.4
1,399,007	+				-0.0
1,399,008	-				+0.7
1,399,045	+				-0.5
1,399,045	+				+0.2
1,399,045	+				+0.9
1,399,045	+				-1.8
1,399,045	+				-0.1
1,399,046	-				+0.3
1,399,046	-				+0.1
1,399,046	-				+0.2
1,399,046	-				-0.5
1,399,046	-				+1.2
1,399,046	-				-0.7
1,399,047	+				-1.0
1,399,048	-				-0.2
1,399,048	-				-1.1
1,399,048	-				-1.3
1,399,057	+				+0.2
1,399,058	-				-1.1
1,399,058	-				-1.5
1,399,058	-				+0.2
1,399,058	-				+0.5
1,399,073	+				-0.3
1,399,073	+				-0.2
1,399,073	+				+0.4
1,399,073	+				-1.7
1,399,073	+				-1.7
1,399,073	+				-0.8
1,399,073	+				-0.4
1,399,074	-				-1.7
1,399,074	-				+1.2
1,399,074	-				-0.2
1,399,074	-				-0.9
1,399,074	-				-0.6
1,399,074	-				-1.8
1,399,104	+				+0.5
1,399,104	+				-1.5
1,399,104	+				-0.8
1,399,105	-				+0.0
1,399,105	-				-0.7
1,399,105	-				-0.3
1,399,105	-				-0.2
1,399,105	-				+0.5
1,399,105	-				-0.0
1,399,115	+				+1.5
1,399,116	-				+1.2
1,399,116	-				-0.4
1,399,119	+				-1.5
1,399,119	+				+0.3
1,399,120	-				-0.7
1,399,120	-				-2.3
1,399,120	-				-0.3
1,399,120	-				-0.3
1,399,120	-				+0.5
1,399,120	-				-0.5
1,399,210	-				-2.7
1,399,210	-				-0.7
1,399,261	+				-1.1
1,399,262	-				+0.1
1,399,262	-				-1.2
1,399,262	-				-0.6
1,399,267	-				+0.5
1,399,267	-				+0.3
1,399,282	+				-0.7
1,399,311	-				-0.0
1,399,311	-				-0.3
1,399,311	-				+1.2
1,399,368	-				+0.0
1,399,368	-				-0.2
1,399,504	-				+0.3
1,399,515	+				-0.5
1,399,515	+				-1.8
1,399,515	+				+0.6
1,399,536	+				-0.5
1,399,536	+				+0.0
1,399,537	-				+0.1
1,399,537	-				+2.1
1,399,537	-				+0.6
1,399,537	-				+0.9
1,399,629	-		MPMX19_01345	0.11	+1.3
1,399,629	-		MPMX19_01345	0.11	-0.8
1,399,643	+		MPMX19_01345	0.11	-1.1
1,399,643	+		MPMX19_01345	0.11	+0.2
1,399,647	-		MPMX19_01345	0.12	+1.3
1,399,693	+		MPMX19_01345	0.14	+0.1
1,399,693	+		MPMX19_01345	0.14	-0.1
1,399,693	+		MPMX19_01345	0.14	-0.7
1,399,693	+		MPMX19_01345	0.14	-0.5
1,399,694	-		MPMX19_01345	0.14	-0.6
1,399,694	-		MPMX19_01345	0.14	+0.8
1,399,694	-		MPMX19_01345	0.14	-0.5
1,399,694	-		MPMX19_01345	0.14	-2.2
1,399,694	-		MPMX19_01345	0.14	-1.7
1,399,696	+		MPMX19_01345	0.14	+0.8
1,399,697	-		MPMX19_01345	0.15	-0.1
1,399,697	-		MPMX19_01345	0.15	+1.2
1,399,697	-		MPMX19_01345	0.15	-1.5
1,399,757	+		MPMX19_01345	0.18	-0.2
1,399,797	-		MPMX19_01345	0.20	+0.5
1,399,797	-		MPMX19_01345	0.20	-1.8
1,399,817	+		MPMX19_01345	0.22	-0.1
1,399,817	+		MPMX19_01345	0.22	+0.7
1,399,817	+		MPMX19_01345	0.22	-0.4
1,399,818	-		MPMX19_01345	0.22	+0.2
1,399,818	-		MPMX19_01345	0.22	-0.3
1,399,826	+		MPMX19_01345	0.22	-0.2
1,399,826	+		MPMX19_01345	0.22	+0.2
1,399,826	+		MPMX19_01345	0.22	-0.8
1,399,826	+		MPMX19_01345	0.22	-0.6
1,399,826	+		MPMX19_01345	0.22	-0.0
1,399,826	+		MPMX19_01345	0.22	+0.3
1,399,827	-		MPMX19_01345	0.22	+0.1
1,399,827	-		MPMX19_01345	0.22	-0.7
1,399,827	-		MPMX19_01345	0.22	+0.0
1,399,827	-		MPMX19_01345	0.22	+0.5
1,399,827	-		MPMX19_01345	0.22	+0.1
1,399,827	-		MPMX19_01345	0.22	-0.8
1,399,896	+		MPMX19_01345	0.26	+0.4
1,399,896	+		MPMX19_01345	0.26	+0.3
1,399,896	+		MPMX19_01345	0.26	-0.2
1,399,896	+		MPMX19_01345	0.26	+0.5
1,399,896	+		MPMX19_01345	0.26	-0.5
1,399,896	+		MPMX19_01345	0.26	+0.7
1,399,896	+		MPMX19_01345	0.26	-0.8
1,399,896	+		MPMX19_01345	0.26	-1.5
1,399,896	+		MPMX19_01345	0.26	+2.6
1,399,896	+		MPMX19_01345	0.26	+0.1
1,399,896	+		MPMX19_01345	0.26	-0.0
1,399,896	+		MPMX19_01345	0.26	-0.1
1,399,896	+		MPMX19_01345	0.26	-0.5
1,399,896	+		MPMX19_01345	0.26	-0.1
1,399,897	-		MPMX19_01345	0.26	-0.1
1,399,897	-		MPMX19_01345	0.26	-1.3
1,399,897	-		MPMX19_01345	0.26	-1.1
1,399,897	-		MPMX19_01345	0.26	-0.6
1,399,897	-		MPMX19_01345	0.26	-0.7
1,399,897	-		MPMX19_01345	0.26	-1.0
1,399,897	-		MPMX19_01345	0.26	-0.6
1,399,897	-		MPMX19_01345	0.26	-0.4
1,399,897	-		MPMX19_01345	0.26	-0.7
1,399,897	-		MPMX19_01345	0.26	+0.3
1,399,897	-		MPMX19_01345	0.26	-0.4
1,399,897	-		MPMX19_01345	0.26	-0.6
1,399,897	-		MPMX19_01345	0.26	-0.5
1,399,897	-		MPMX19_01345	0.26	+0.8
1,399,897	-		MPMX19_01345	0.26	-0.9
1,399,897	-		MPMX19_01345	0.26	-0.4
1,399,897	-		MPMX19_01345	0.26	-0.8
1,399,897	-		MPMX19_01345	0.26	-1.3
1,399,897	-		MPMX19_01345	0.26	-0.2
1,399,897	-		MPMX19_01345	0.26	+0.6
1,399,897	-		MPMX19_01345	0.26	-0.5
1,399,898	+		MPMX19_01345	0.26	+0.4
1,399,898	+		MPMX19_01345	0.26	-0.7
1,399,898	+		MPMX19_01345	0.26	-2.2
1,399,898	+		MPMX19_01345	0.26	-0.7
1,399,898	+		MPMX19_01345	0.26	-1.3
1,399,898	+		MPMX19_01345	0.26	-0.5
1,399,899	-		MPMX19_01345	0.26	-0.2
1,399,899	-		MPMX19_01345	0.26	-0.4
1,399,899	-		MPMX19_01345	0.26	+0.5
1,399,899	-		MPMX19_01345	0.26	-1.1
1,399,899	-		MPMX19_01345	0.26	+0.6
1,399,899	-		MPMX19_01345	0.26	+0.9
1,399,899	-		MPMX19_01345	0.26	+0.8
1,399,899	-		MPMX19_01345	0.26	+0.8
1,399,899	-		MPMX19_01345	0.26	-0.6
1,399,899	-		MPMX19_01345	0.26	-1.3