Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01178

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,218,377	+				-1.3
1,218,377	+				-1.8
1,218,377	+				-0.5
1,218,377	+				+0.1
1,218,377	+				-1.2
1,218,377	+				+0.0
1,218,377	+				-0.5
1,218,377	+				-0.9
1,218,378	-				-0.1
1,218,378	-				-0.0
1,218,378	-				+1.2
1,218,378	-				+0.2
1,218,378	-				-2.0
1,218,378	-				-0.6
1,218,378	-				+1.1
1,218,378	-				+0.5
1,218,380	+				-0.8
1,218,380	+				-1.1
1,218,380	+				+0.2
1,218,380	+				-0.3
1,218,380	+				-1.9
1,218,380	+				-0.9
1,218,380	+				+0.2
1,218,381	-				-1.8
1,218,381	-				-0.5
1,218,381	-				-0.9
1,218,396	+				-0.8
1,218,397	-				-0.5
1,218,397	-				-1.0
1,218,397	-				-0.8
1,218,448	+				-0.1
1,218,448	+				+0.1
1,218,449	-				-0.5
1,218,455	+				-0.5
1,218,456	-				+0.5
1,218,506	+				+1.5
1,218,512	+				-0.1
1,218,602	+		MPMX19_01177	0.15	+0.9
1,218,603	-		MPMX19_01177	0.15	-1.5
1,219,208	+				+0.5
1,219,208	+				-0.8
1,219,208	+				+0.5
1,219,208	+				+0.5
1,219,409	+				-1.0
1,219,409	+				+0.1
1,219,409	+				+1.3
1,219,409	+				-0.1
1,219,409	+				-2.2
1,219,409	+				-1.1
1,219,409	+				-1.2
1,219,409	+				-2.6
1,219,409	+				+0.9
1,219,410	-				-0.4
1,219,410	-				+0.4
1,219,410	-				+0.2
1,219,410	-				+0.4
1,219,410	-				+0.8
1,219,410	-				-0.1
1,219,410	-				-1.7
1,219,410	-				-0.9
1,219,410	-				-0.2
1,219,410	-				+0.3
1,219,410	-				-0.0
1,219,410	-				+0.3
1,219,410	-				+1.0
1,219,410	-				-1.1
1,219,410	-				-0.7
1,219,410	-				-1.0
1,219,410	-				-0.6
1,219,410	-				+1.0
1,219,410	-				-1.2
1,219,410	-				-0.0
1,219,410	-				-0.9
1,219,410	-				+0.5
1,219,545	+		MPMX19_01178	0.16	-0.4
1,219,545	+		MPMX19_01178	0.16	+0.5
1,219,545	+		MPMX19_01178	0.16	-1.3
1,219,545	+		MPMX19_01178	0.16	+0.5
1,219,545	+		MPMX19_01178	0.16	-2.0
1,219,545	+		MPMX19_01178	0.16	-0.6
1,219,546	-		MPMX19_01178	0.17	+0.4
1,219,546	-		MPMX19_01178	0.17	+0.1
1,219,546	-		MPMX19_01178	0.17	+0.1
1,219,546	-		MPMX19_01178	0.17	+0.3
1,219,546	-		MPMX19_01178	0.17	+0.6
1,219,784	+		MPMX19_01178	0.28	-0.0
1,219,784	+		MPMX19_01178	0.28	-0.6
1,219,784	+		MPMX19_01178	0.28	-0.3
1,219,784	+		MPMX19_01178	0.28	+1.3
1,219,784	+		MPMX19_01178	0.28	-0.0
1,219,784	+		MPMX19_01178	0.28	+0.3
1,219,784	+		MPMX19_01178	0.28	+0.2
1,219,784	+		MPMX19_01178	0.28	-0.7
1,219,784	+		MPMX19_01178	0.28	-0.1
1,219,784	+		MPMX19_01178	0.28	-0.7
1,219,785	-		MPMX19_01178	0.28	+0.2
1,219,785	-		MPMX19_01178	0.28	+0.5
1,219,785	-		MPMX19_01178	0.28	-0.5
1,219,785	-		MPMX19_01178	0.28	-0.0
1,219,785	-		MPMX19_01178	0.28	-1.5
1,219,785	-		MPMX19_01178	0.28	-0.4
1,219,785	-		MPMX19_01178	0.28	-0.2
1,219,785	-		MPMX19_01178	0.28	-0.3
1,219,785	-		MPMX19_01178	0.28	-0.3
1,219,785	-		MPMX19_01178	0.28	-0.4
1,219,886	+		MPMX19_01178	0.33	-2.1
1,219,886	+		MPMX19_01178	0.33	-0.0
1,219,886	+		MPMX19_01178	0.33	-1.2
1,219,886	+		MPMX19_01178	0.33	-0.2
1,219,886	+		MPMX19_01178	0.33	-0.7
1,219,886	+		MPMX19_01178	0.33	+0.8
1,219,886	+		MPMX19_01178	0.33	-1.2
1,219,886	+		MPMX19_01178	0.33	-0.3
1,219,886	+		MPMX19_01178	0.33	+0.3
1,219,886	+		MPMX19_01178	0.33	+0.5
1,219,887	-		MPMX19_01178	0.33	-1.6
1,219,887	-		MPMX19_01178	0.33	-0.4
1,219,887	-		MPMX19_01178	0.33	+0.8
1,219,887	-		MPMX19_01178	0.33	-0.5
1,219,887	-		MPMX19_01178	0.33	-0.1
1,219,887	-		MPMX19_01178	0.33	+1.0
1,219,887	-		MPMX19_01178	0.33	-0.2
1,219,887	-		MPMX19_01178	0.33	-0.0
1,219,919	+		MPMX19_01178	0.35	+1.3
1,219,919	+		MPMX19_01178	0.35	+0.1
1,219,919	+		MPMX19_01178	0.35	+0.0
1,219,920	-		MPMX19_01178	0.35	+0.6
1,219,920	-		MPMX19_01178	0.35	+0.3
1,219,967	+		MPMX19_01178	0.37	-0.5
1,219,967	+		MPMX19_01178	0.37	-1.5
1,219,967	+		MPMX19_01178	0.37	-3.3
1,219,967	+		MPMX19_01178	0.37	-0.5
1,219,967	+		MPMX19_01178	0.37	+0.1
1,219,967	+		MPMX19_01178	0.37	-0.1
1,219,967	+		MPMX19_01178	0.37	-0.7
1,219,967	+		MPMX19_01178	0.37	-0.2
1,219,967	+		MPMX19_01178	0.37	-0.3
1,219,967	+		MPMX19_01178	0.37	-0.2
1,219,967	+		MPMX19_01178	0.37	+0.0
1,219,967	+		MPMX19_01178	0.37	-0.4
1,219,967	+		MPMX19_01178	0.37	-0.8
1,219,967	+		MPMX19_01178	0.37	+0.1
1,219,967	+		MPMX19_01178	0.37	-0.5
1,219,968	-		MPMX19_01178	0.37	+0.5
1,219,968	-		MPMX19_01178	0.37	-0.5
1,219,968	-		MPMX19_01178	0.37	+0.2
1,219,968	-		MPMX19_01178	0.37	-0.8
1,219,968	-		MPMX19_01178	0.37	-0.6
1,219,968	-		MPMX19_01178	0.37	-0.1
1,219,968	-		MPMX19_01178	0.37	+0.3
1,219,968	-		MPMX19_01178	0.37	+0.5
1,219,968	-		MPMX19_01178	0.37	-0.3
1,219,968	-		MPMX19_01178	0.37	-0.7
1,219,968	-		MPMX19_01178	0.37	+1.9
1,220,214	-		MPMX19_01178	0.49	+0.4
1,220,214	-		MPMX19_01178	0.49	-0.4
1,220,312	+		MPMX19_01178	0.54	-0.6
1,220,312	+		MPMX19_01178	0.54	-0.1
1,220,313	-		MPMX19_01178	0.54	+0.1
1,220,313	-		MPMX19_01178	0.54	-0.8
1,220,313	-		MPMX19_01178	0.54	+0.2
1,220,313	-		MPMX19_01178	0.54	-1.3
1,220,390	+		MPMX19_01178	0.58	+0.6
1,220,390	+		MPMX19_01178	0.58	+0.3
1,220,391	-		MPMX19_01178	0.58	+0.2
1,220,391	-		MPMX19_01178	0.58	+0.1
1,220,453	+		MPMX19_01178	0.61	+0.6
1,220,453	+		MPMX19_01178	0.61	+0.2
1,220,453	+		MPMX19_01178	0.61	+0.1
1,220,453	+		MPMX19_01178	0.61	-0.1
1,220,453	+		MPMX19_01178	0.61	+1.5
1,220,453	+		MPMX19_01178	0.61	-0.7
1,220,454	-		MPMX19_01178	0.61	+0.6
1,220,454	-		MPMX19_01178	0.61	-0.3
1,220,454	-		MPMX19_01178	0.61	-0.7
1,220,454	-		MPMX19_01178	0.61	+0.5
1,220,480	-		MPMX19_01178	0.62	-0.0
1,220,548	+		MPMX19_01178	0.65	-2.5
1,220,548	+		MPMX19_01178	0.65	+1.3
1,220,548	+		MPMX19_01178	0.65	-1.5
1,220,830	+		MPMX19_01178	0.79	-0.3
1,220,831	-		MPMX19_01178	0.79	-0.0
1,220,933	+		MPMX19_01178	0.84	-1.1
1,220,933	+		MPMX19_01178	0.84	-0.3
1,220,934	-		MPMX19_01178	0.84	-0.6
1,220,988	+		MPMX19_01178	0.87	+0.5
1,220,988	+		MPMX19_01178	0.87	+0.5
1,220,988	+		MPMX19_01178	0.87	-0.1
1,220,988	+		MPMX19_01178	0.87	-0.8
1,220,988	+		MPMX19_01178	0.87	-2.5
1,220,988	+		MPMX19_01178	0.87	+0.5
1,220,988	+		MPMX19_01178	0.87	-0.4
1,220,988	+		MPMX19_01178	0.87	+0.6
1,220,988	+		MPMX19_01178	0.87	-0.5
1,220,988	+		MPMX19_01178	0.87	-0.1
1,220,988	+		MPMX19_01178	0.87	-1.3
1,220,988	+		MPMX19_01178	0.87	-1.0
1,220,988	+		MPMX19_01178	0.87	-0.5
1,220,988	+		MPMX19_01178	0.87	-0.4
1,220,988	+		MPMX19_01178	0.87	-1.7
1,220,988	+		MPMX19_01178	0.87	+0.3
1,220,988	+		MPMX19_01178	0.87	+0.3
1,220,988	+		MPMX19_01178	0.87	-0.3
1,220,988	+		MPMX19_01178	0.87	+0.4
1,220,988	+		MPMX19_01178	0.87	-0.8
1,220,988	+		MPMX19_01178	0.87	-1.2
1,220,988	+		MPMX19_01178	0.87	-1.1
1,220,988	+		MPMX19_01178	0.87	+0.2
1,220,988	+		MPMX19_01178	0.87	+0.8
1,220,989	-		MPMX19_01178	0.87	-0.0
1,220,989	-		MPMX19_01178	0.87	-0.2
1,220,989	-		MPMX19_01178	0.87	-0.5
1,220,989	-		MPMX19_01178	0.87	+0.2
1,220,989	-		MPMX19_01178	0.87	-0.8
1,220,989	-		MPMX19_01178	0.87	+0.5
1,220,989	-		MPMX19_01178	0.87	-0.0
1,220,989	-		MPMX19_01178	0.87	+0.2
1,220,989	-		MPMX19_01178	0.87	+0.5
1,220,989	-		MPMX19_01178	0.87	+0.0
1,220,989	-		MPMX19_01178	0.87	-0.2
1,220,989	-		MPMX19_01178	0.87	-0.1
1,220,989	-		MPMX19_01178	0.87	+1.2
1,220,989	-		MPMX19_01178	0.87	-2.4
1,220,989	-		MPMX19_01178	0.87	-1.3
1,220,989	-		MPMX19_01178	0.87	-0.8
1,220,989	-		MPMX19_01178	0.87	-2.2
1,220,989	-		MPMX19_01178	0.87	+0.1
1,220,989	-		MPMX19_01178	0.87	-0.1
1,220,989	-		MPMX19_01178	0.87	-0.1
1,220,989	-		MPMX19_01178	0.87	+0.3
1,220,989	-		MPMX19_01178	0.87	+0.3
1,220,989	-		MPMX19_01178	0.87	-1.3
1,220,990	+		MPMX19_01178	0.87	+1.3
1,220,990	+		MPMX19_01178	0.87	+0.2
1,220,990	+		MPMX19_01178	0.87	+0.5
1,220,990	+		MPMX19_01178	0.87	+0.3
1,220,990	+		MPMX19_01178	0.87	+0.2
1,220,990	+		MPMX19_01178	0.87	-0.7
1,220,991	-		MPMX19_01178	0.87	-0.8
1,220,991	-		MPMX19_01178	0.87	+0.9
1,220,991	-		MPMX19_01178	0.87	-0.4
1,221,163	+				+0.1
1,221,164	-				-1.3
1,221,164	-				+0.2
1,221,164	-				-0.8
1,221,234	+				-0.8
1,221,234	+				-0.7
1,221,235	-				+0.9
1,221,385	+		MPMX19_01179	0.35	-1.5
1,221,987	+				-0.8
1,221,987	+				+0.5
1,221,987	+				+0.6
1,221,987	+				+0.5
1,221,987	+				-0.5
1,221,987	+				+0.6
1,221,987	+				-0.5
1,221,987	+				+2.5
1,221,987	+				-0.1
1,221,988	-				-0.1
1,221,988	-				+0.4
1,221,988	-				+0.0
1,221,988	-				-0.5
1,221,988	-				-0.3
1,221,988	-				-1.4
1,221,988	-				-0.6
1,221,993	+				-0.7
1,221,993	+				-1.2
1,221,993	+				-0.7
1,221,993	+				-0.3
1,221,994	-				-1.3
1,221,994	-				-1.5
1,221,994	-				-0.0
1,222,016	+				-0.0
1,222,016	+				+0.5
1,222,016	+				+1.5
1,222,016	+				+0.3
1,222,016	+				-1.2
1,222,016	+				+1.0
1,222,016	+				-1.6
1,222,016	+				+0.3
1,222,016	+				-1.8
1,222,016	+				+0.7
1,222,016	+				-1.5
1,222,016	+				-0.6
1,222,016	+				-1.5
1,222,016	+				-0.8
1,222,016	+				+0.5
1,222,016	+				-0.6
1,222,017	-				-0.7
1,222,017	-				-1.2
1,222,017	-				-0.1
1,222,017	-				-0.1
1,222,017	-				-0.8
1,222,017	-				+1.9
1,222,017	-				-2.1
1,222,017	-				-1.0
1,222,017	-				+0.8
1,222,017	-				-0.2
1,222,017	-				-1.3
1,222,017	-				+0.7
1,222,017	-				-0.9
1,222,017	-				-1.2
1,222,017	-				-0.5
1,222,017	-				+0.0
1,222,103	+		MPMX19_01181	0.13	-0.7
1,222,190	+		MPMX19_01181	0.18	-0.9
1,222,191	-		MPMX19_01181	0.18	+1.1
1,222,246	-		MPMX19_01181	0.21	-0.8
1,222,246	-		MPMX19_01181	0.21	-0.7