Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01159

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,196,917	+				+0.0
1,196,917	+				+0.5
1,196,917	+				-0.3
1,196,917	+				+0.3
1,196,917	+				+1.5
1,196,917	+				+0.5
1,196,917	+				+1.7
1,196,917	+				-2.1
1,196,917	+				+0.2
1,196,917	+				-2.0
1,196,917	+				-2.3
1,196,917	+				-1.4
1,196,918	-				-0.0
1,196,918	-				+0.6
1,196,918	-				-0.2
1,196,918	-				+0.7
1,196,918	-				-0.5
1,196,918	-				-1.4
1,196,918	-				-0.2
1,196,918	-				+0.5
1,196,918	-				-0.2
1,196,918	-				-2.6
1,196,918	-				+0.0
1,196,918	-				-0.0
1,196,918	-				+0.4
1,196,918	-				+1.0
1,196,918	-				-1.8
1,196,918	-				-0.5
1,196,918	-				-0.1
1,196,919	+				+0.8
1,196,919	+				-0.6
1,196,919	+				+0.5
1,196,919	+				+0.5
1,196,919	+				+0.1
1,196,919	+				+0.9
1,196,919	+				-0.5
1,196,919	+				-1.3
1,196,920	-				-1.0
1,196,920	-				+0.2
1,196,920	-				-1.6
1,196,920	-				-1.2
1,196,920	-				+0.7
1,196,920	-				+0.5
1,196,920	-				-1.5
1,196,920	-				+1.3
1,196,920	-				+1.2
1,196,920	-				+1.0
1,196,920	-				+1.2
1,196,920	-				+1.6
1,196,920	-				+0.2
1,196,920	-				+1.0
1,196,920	-				+0.0
1,196,920	-				-0.1
1,196,920	-				-0.1
1,197,109	+		MPMX19_01158	0.23	-0.7
1,197,109	+		MPMX19_01158	0.23	+1.5
1,197,110	-		MPMX19_01158	0.23	-0.5
1,197,110	-		MPMX19_01158	0.23	-1.3
1,197,110	-		MPMX19_01158	0.23	-1.0
1,197,110	-		MPMX19_01158	0.23	+0.8
1,197,178	+		MPMX19_01158	0.31	-2.0
1,197,178	+		MPMX19_01158	0.31	-0.4
1,197,178	+		MPMX19_01158	0.31	+1.1
1,197,178	+		MPMX19_01158	0.31	-0.3
1,197,179	-		MPMX19_01158	0.31	+0.5
1,197,179	-		MPMX19_01158	0.31	-1.3
1,197,179	-		MPMX19_01158	0.31	+0.6
1,197,179	-		MPMX19_01158	0.31	-1.7
1,197,179	-		MPMX19_01158	0.31	-0.5
1,197,179	-		MPMX19_01158	0.31	-1.8
1,197,179	-		MPMX19_01158	0.31	-0.7
1,197,179	-		MPMX19_01158	0.31	+0.4
1,197,229	+		MPMX19_01158	0.36	-1.1
1,197,229	+		MPMX19_01158	0.36	-1.5
1,197,229	+		MPMX19_01158	0.36	-0.1
1,197,229	+		MPMX19_01158	0.36	-0.2
1,197,229	+		MPMX19_01158	0.36	+0.6
1,197,230	-		MPMX19_01158	0.36	-2.2
1,197,230	-		MPMX19_01158	0.36	+0.1
1,197,230	-		MPMX19_01158	0.36	-1.5
1,197,230	-		MPMX19_01158	0.36	-0.4
1,197,230	-		MPMX19_01158	0.36	-0.3
1,197,367	+		MPMX19_01158	0.50	+1.2
1,197,367	+		MPMX19_01158	0.50	-0.1
1,197,367	+		MPMX19_01158	0.50	-0.7
1,197,367	+		MPMX19_01158	0.50	+0.3
1,197,367	+		MPMX19_01158	0.50	+0.2
1,197,367	+		MPMX19_01158	0.50	+0.3
1,197,367	+		MPMX19_01158	0.50	-0.2
1,197,368	-		MPMX19_01158	0.50	-1.5
1,197,400	+		MPMX19_01158	0.54	+1.7
1,197,401	-		MPMX19_01158	0.54	+0.6
1,197,526	+		MPMX19_01158	0.67	-0.3
1,197,526	+		MPMX19_01158	0.67	-0.8
1,197,526	+		MPMX19_01158	0.67	+0.1
1,197,526	+		MPMX19_01158	0.67	-0.2
1,197,526	+		MPMX19_01158	0.67	-1.5
1,197,526	+		MPMX19_01158	0.67	-0.4
1,197,526	+		MPMX19_01158	0.67	-1.4
1,197,526	+		MPMX19_01158	0.67	-0.3
1,197,526	+		MPMX19_01158	0.67	-0.1
1,197,526	+		MPMX19_01158	0.67	-1.2
1,197,526	+		MPMX19_01158	0.67	+0.4
1,197,526	+		MPMX19_01158	0.67	+0.7
1,197,526	+		MPMX19_01158	0.67	-0.5
1,197,526	+		MPMX19_01158	0.67	+1.3
1,197,526	+		MPMX19_01158	0.67	-0.0
1,197,526	+		MPMX19_01158	0.67	-2.3
1,197,526	+		MPMX19_01158	0.67	+0.3
1,197,527	-		MPMX19_01158	0.67	-0.3
1,197,527	-		MPMX19_01158	0.67	-2.2
1,197,527	-		MPMX19_01158	0.67	-0.0
1,197,527	-		MPMX19_01158	0.67	-2.4
1,197,527	-		MPMX19_01158	0.67	-0.5
1,197,527	-		MPMX19_01158	0.67	+0.8
1,197,527	-		MPMX19_01158	0.67	-0.7
1,197,527	-		MPMX19_01158	0.67	+0.1
1,197,527	-		MPMX19_01158	0.67	+1.5
1,197,527	-		MPMX19_01158	0.67	+0.9
1,197,527	-		MPMX19_01158	0.67	-1.2
1,197,527	-		MPMX19_01158	0.67	+0.5
1,197,527	-		MPMX19_01158	0.67	+0.7
1,197,527	-		MPMX19_01158	0.67	-1.0
1,197,527	-		MPMX19_01158	0.67	+0.1
1,197,527	-		MPMX19_01158	0.67	-1.1
1,197,527	-		MPMX19_01158	0.67	+0.0
1,197,527	-		MPMX19_01158	0.67	+0.7
1,197,527	-		MPMX19_01158	0.67	+0.7
1,197,633	+		MPMX19_01158	0.78	+1.0
1,197,633	+		MPMX19_01158	0.78	+0.0
1,197,633	+		MPMX19_01158	0.78	-0.2
1,197,634	-		MPMX19_01158	0.78	-0.5
1,197,844	+				-1.4
1,197,845	-				+0.9
1,197,958	-				-0.3
1,198,046	+		MPMX19_01159	0.14	+0.6
1,198,046	+		MPMX19_01159	0.14	+0.8
1,198,046	+		MPMX19_01159	0.14	-0.1
1,198,046	+		MPMX19_01159	0.14	+0.2
1,198,046	+		MPMX19_01159	0.14	+0.1
1,198,046	+		MPMX19_01159	0.14	-0.4
1,198,046	+		MPMX19_01159	0.14	-0.5
1,198,046	+		MPMX19_01159	0.14	-1.3
1,198,046	+		MPMX19_01159	0.14	-0.8
1,198,046	+		MPMX19_01159	0.14	+2.0
1,198,046	+		MPMX19_01159	0.14	-0.5
1,198,047	-		MPMX19_01159	0.14	-0.5
1,198,047	-		MPMX19_01159	0.14	+4.1
1,198,047	-		MPMX19_01159	0.14	-1.4
1,198,047	-		MPMX19_01159	0.14	+0.0
1,198,047	-		MPMX19_01159	0.14	-0.6
1,198,047	-		MPMX19_01159	0.14	+0.2
1,198,047	-		MPMX19_01159	0.14	+0.4
1,198,047	-		MPMX19_01159	0.14	+1.1
1,198,047	-		MPMX19_01159	0.14	-0.4
1,198,047	-		MPMX19_01159	0.14	+1.2
1,198,047	-		MPMX19_01159	0.14	+0.9
1,198,047	-		MPMX19_01159	0.14	+0.9
1,198,047	-		MPMX19_01159	0.14	+0.5
1,198,047	-		MPMX19_01159	0.14	-1.5
1,198,047	-		MPMX19_01159	0.14	+0.8
1,198,047	-		MPMX19_01159	0.14	-0.2
1,198,047	-		MPMX19_01159	0.14	+0.4
1,198,047	-		MPMX19_01159	0.14	+0.7
1,198,047	-		MPMX19_01159	0.14	-0.3
1,198,047	-		MPMX19_01159	0.14	-0.3
1,198,047	-		MPMX19_01159	0.14	+0.3
1,198,100	+		MPMX19_01159	0.19	+0.2
1,198,100	+		MPMX19_01159	0.19	-1.3
1,198,100	+		MPMX19_01159	0.19	+0.9
1,198,100	+		MPMX19_01159	0.19	+0.2
1,198,100	+		MPMX19_01159	0.19	+0.2
1,198,100	+		MPMX19_01159	0.19	+1.1
1,198,100	+		MPMX19_01159	0.19	+0.7
1,198,100	+		MPMX19_01159	0.19	+0.1
1,198,100	+		MPMX19_01159	0.19	+0.0
1,198,100	+		MPMX19_01159	0.19	+0.4
1,198,100	+		MPMX19_01159	0.19	-0.2
1,198,100	+		MPMX19_01159	0.19	-0.1
1,198,100	+		MPMX19_01159	0.19	+0.5
1,198,100	+		MPMX19_01159	0.19	+1.8
1,198,100	+		MPMX19_01159	0.19	-1.1
1,198,100	+		MPMX19_01159	0.19	-1.1
1,198,101	-		MPMX19_01159	0.20	+0.7
1,198,101	-		MPMX19_01159	0.20	-0.4
1,198,101	-		MPMX19_01159	0.20	-0.1
1,198,101	-		MPMX19_01159	0.20	+0.8
1,198,101	-		MPMX19_01159	0.20	+0.3
1,198,101	-		MPMX19_01159	0.20	+0.6
1,198,101	-		MPMX19_01159	0.20	-1.4
1,198,101	-		MPMX19_01159	0.20	+0.1
1,198,101	-		MPMX19_01159	0.20	-0.2
1,198,101	-		MPMX19_01159	0.20	-0.1
1,198,101	-		MPMX19_01159	0.20	-0.4
1,198,101	-		MPMX19_01159	0.20	+0.2
1,198,103	-		MPMX19_01159	0.20	+0.5
1,198,202	+		MPMX19_01159	0.30	+0.5
1,198,202	+		MPMX19_01159	0.30	-0.2
1,198,202	+		MPMX19_01159	0.30	-1.6
1,198,202	+		MPMX19_01159	0.30	-1.0
1,198,202	+		MPMX19_01159	0.30	-2.1
1,198,202	+		MPMX19_01159	0.30	-0.8
1,198,202	+		MPMX19_01159	0.30	+0.7
1,198,202	+		MPMX19_01159	0.30	+0.2
1,198,202	+		MPMX19_01159	0.30	-0.5
1,198,202	+		MPMX19_01159	0.30	+1.4
1,198,202	+		MPMX19_01159	0.30	+0.9
1,198,202	+		MPMX19_01159	0.30	+0.7
1,198,202	+		MPMX19_01159	0.30	+1.3
1,198,202	+		MPMX19_01159	0.30	-3.1
1,198,202	+		MPMX19_01159	0.30	-0.4
1,198,203	-		MPMX19_01159	0.30	-0.2
1,198,203	-		MPMX19_01159	0.30	+1.0
1,198,203	-		MPMX19_01159	0.30	-0.3
1,198,203	-		MPMX19_01159	0.30	-0.8
1,198,203	-		MPMX19_01159	0.30	+0.4
1,198,203	-		MPMX19_01159	0.30	+0.5
1,198,203	-		MPMX19_01159	0.30	-0.7
1,198,203	-		MPMX19_01159	0.30	-0.1
1,198,203	-		MPMX19_01159	0.30	-0.1
1,198,203	-		MPMX19_01159	0.30	-0.1
1,198,203	-		MPMX19_01159	0.30	+0.9
1,198,203	-		MPMX19_01159	0.30	+1.0
1,198,203	-		MPMX19_01159	0.30	-0.7
1,198,203	-		MPMX19_01159	0.30	-0.0
1,198,203	-		MPMX19_01159	0.30	+0.8
1,198,203	-		MPMX19_01159	0.30	-1.1
1,198,263	-		MPMX19_01159	0.37	-0.4
1,198,373	+		MPMX19_01159	0.49	+0.4
1,198,373	+		MPMX19_01159	0.49	+0.5
1,198,373	+		MPMX19_01159	0.49	+0.5
1,198,373	+		MPMX19_01159	0.49	-0.3
1,198,373	+		MPMX19_01159	0.49	-1.8
1,198,373	+		MPMX19_01159	0.49	+1.3
1,198,373	+		MPMX19_01159	0.49	+1.5
1,198,374	-		MPMX19_01159	0.49	+0.3
1,198,374	-		MPMX19_01159	0.49	-2.0
1,198,374	-		MPMX19_01159	0.49	-2.3
1,198,374	-		MPMX19_01159	0.49	+0.0
1,198,532	+		MPMX19_01159	0.65	+0.5
1,198,532	+		MPMX19_01159	0.65	+1.5
1,198,532	+		MPMX19_01159	0.65	-0.1
1,198,532	+		MPMX19_01159	0.65	-2.0
1,198,532	+		MPMX19_01159	0.65	+0.1
1,198,532	+		MPMX19_01159	0.65	+0.5
1,198,533	-		MPMX19_01159	0.66	-0.7
1,198,533	-		MPMX19_01159	0.66	-3.0
1,198,533	-		MPMX19_01159	0.66	+0.3
1,198,533	-		MPMX19_01159	0.66	+0.0
1,198,533	-		MPMX19_01159	0.66	+0.1
1,198,533	-		MPMX19_01159	0.66	+0.4
1,198,533	-		MPMX19_01159	0.66	+0.4
1,198,533	-		MPMX19_01159	0.66	-0.1
1,198,533	-		MPMX19_01159	0.66	+1.4
1,198,727	+		MPMX19_01159	0.86	+0.4
1,198,727	+		MPMX19_01159	0.86	+0.3
1,198,727	+		MPMX19_01159	0.86	+0.0
1,198,727	+		MPMX19_01159	0.86	-0.4
1,198,727	+		MPMX19_01159	0.86	+0.2
1,198,727	+		MPMX19_01159	0.86	+0.7
1,198,727	+		MPMX19_01159	0.86	+0.6
1,198,727	+		MPMX19_01159	0.86	+1.2
1,198,727	+		MPMX19_01159	0.86	+0.2
1,198,727	+		MPMX19_01159	0.86	-0.6
1,198,727	+		MPMX19_01159	0.86	+0.1
1,198,727	+		MPMX19_01159	0.86	+0.0
1,198,727	+		MPMX19_01159	0.86	-1.3
1,198,728	-		MPMX19_01159	0.86	-0.5
1,198,728	-		MPMX19_01159	0.86	-1.6
1,198,728	-		MPMX19_01159	0.86	-0.7
1,198,728	-		MPMX19_01159	0.86	-1.1
1,198,728	-		MPMX19_01159	0.86	-0.5
1,198,728	-		MPMX19_01159	0.86	+0.7
1,198,728	-		MPMX19_01159	0.86	+1.2
1,198,728	-		MPMX19_01159	0.86	+0.2
1,198,728	-		MPMX19_01159	0.86	+0.4
1,198,728	-		MPMX19_01159	0.86	+1.0
1,198,728	-		MPMX19_01159	0.86	-0.0
1,198,728	-		MPMX19_01159	0.86	-1.1
1,198,728	-		MPMX19_01159	0.86	-1.1
1,198,728	-		MPMX19_01159	0.86	-0.1
1,198,728	-		MPMX19_01159	0.86	+1.1
1,198,728	-		MPMX19_01159	0.86	-3.0
1,198,728	-		MPMX19_01159	0.86	+1.5
1,198,951	+				+0.5
1,198,951	+				-0.3
1,198,951	+				+0.5
1,198,951	+				-0.8
1,198,951	+				-0.8
1,198,951	+				-0.1
1,198,952	-				-0.8
1,198,952	-				+0.3
1,198,952	-				+0.0
1,198,952	-				-0.8
1,199,034	+		MPMX19_01160	0.13	+0.6
1,199,034	+		MPMX19_01160	0.13	-0.1
1,199,034	+		MPMX19_01160	0.13	-0.0
1,199,034	+		MPMX19_01160	0.13	+0.1
1,199,034	+		MPMX19_01160	0.13	-2.3
1,199,034	+		MPMX19_01160	0.13	-1.5
1,199,034	+		MPMX19_01160	0.13	+0.2
1,199,034	+		MPMX19_01160	0.13	+0.3
1,199,034	+		MPMX19_01160	0.13	-1.5
1,199,034	+		MPMX19_01160	0.13	-0.6
1,199,034	+		MPMX19_01160	0.13	+0.6
1,199,034	+		MPMX19_01160	0.13	+1.1
1,199,034	+		MPMX19_01160	0.13	+2.2
1,199,034	+		MPMX19_01160	0.13	-1.0
1,199,034	+		MPMX19_01160	0.13	-0.4
1,199,034	+		MPMX19_01160	0.13	+0.4
1,199,034	+		MPMX19_01160	0.13	-1.8
1,199,034	+		MPMX19_01160	0.13	-2.0
1,199,034	+		MPMX19_01160	0.13	-0.0
1,199,034	+		MPMX19_01160	0.13	+0.1
1,199,034	+		MPMX19_01160	0.13	+0.1
1,199,034	+		MPMX19_01160	0.13	+0.8
1,199,034	+		MPMX19_01160	0.13	+0.5
1,199,034	+		MPMX19_01160	0.13	-2.2
1,199,034	+		MPMX19_01160	0.13	-0.2
1,199,035	-		MPMX19_01160	0.13	-0.5
1,199,035	-		MPMX19_01160	0.13	+0.3
1,199,035	-		MPMX19_01160	0.13	-0.5
1,199,035	-		MPMX19_01160	0.13	-0.5
1,199,035	-		MPMX19_01160	0.13	-0.5
1,199,035	-		MPMX19_01160	0.13	-1.3
1,199,035	-		MPMX19_01160	0.13	-0.3
1,199,035	-		MPMX19_01160	0.13	-0.4
1,199,035	-		MPMX19_01160	0.13	-0.4
1,199,035	-		MPMX19_01160	0.13	-0.2
1,199,035	-		MPMX19_01160	0.13	-0.3
1,199,035	-		MPMX19_01160	0.13	-0.0
1,199,035	-		MPMX19_01160	0.13	+0.1
1,199,035	-		MPMX19_01160	0.13	-2.6
1,199,035	-		MPMX19_01160	0.13	+0.8
1,199,035	-		MPMX19_01160	0.13	-0.2
1,199,035	-		MPMX19_01160	0.13	-1.4
1,199,035	-		MPMX19_01160	0.13	-0.1
1,199,035	-		MPMX19_01160	0.13	-0.1
1,199,035	-		MPMX19_01160	0.13	-0.8
1,199,068	+		MPMX19_01160	0.15	+1.0
1,199,068	+		MPMX19_01160	0.15	+0.7
1,199,068	+		MPMX19_01160	0.15	-1.1
1,199,068	+		MPMX19_01160	0.15	-0.8
1,199,068	+		MPMX19_01160	0.15	-0.1
1,199,068	+		MPMX19_01160	0.15	+0.3
1,199,069	-		MPMX19_01160	0.15	+0.2
1,199,069	-		MPMX19_01160	0.15	-0.8
1,199,069	-		MPMX19_01160	0.15	+0.1
1,199,069	-		MPMX19_01160	0.15	-0.2
1,199,090	-		MPMX19_01160	0.17	-0.3
1,199,090	-		MPMX19_01160	0.17	+0.1
1,199,177	+		MPMX19_01160	0.23	-1.2
1,199,177	+		MPMX19_01160	0.23	-0.1
1,199,177	+		MPMX19_01160	0.23	-0.7
1,199,178	+		MPMX19_01160	0.23	+0.6
1,199,178	-		MPMX19_01160	0.23	-0.1
1,199,178	-		MPMX19_01160	0.23	-1.5
1,199,227	+		MPMX19_01160	0.27	-0.3
1,199,227	+		MPMX19_01160	0.27	-0.7
1,199,227	+		MPMX19_01160	0.27	-1.1
1,199,228	-		MPMX19_01160	0.27	+0.3
1,199,228	-		MPMX19_01160	0.27	-1.1
1,199,228	-		MPMX19_01160	0.27	-0.2
1,199,228	-		MPMX19_01160	0.27	-0.5
1,199,228	-		MPMX19_01160	0.27	+0.5
1,199,228	-		MPMX19_01160	0.27	-0.1
1,199,228	-		MPMX19_01160	0.27	-0.4
1,199,228	-		MPMX19_01160	0.27	+0.3
1,199,228	-		MPMX19_01160	0.27	+0.6
1,199,228	-		MPMX19_01160	0.27	+0.0
1,199,228	-		MPMX19_01160	0.27	-0.2
1,199,228	-		MPMX19_01160	0.27	+0.0
1,199,232	+		MPMX19_01160	0.27	+1.5
1,199,233	-		MPMX19_01160	0.27	-1.7
1,199,233	-		MPMX19_01160	0.27	+0.4
1,199,443	+		MPMX19_01160	0.42	+0.7
1,199,443	+		MPMX19_01160	0.42	+0.0
1,199,444	-		MPMX19_01160	0.42	-1.1
1,199,444	-		MPMX19_01160	0.42	+0.5