Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01156

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,193,654	+		MPMX19_01153	0.61	+0.4
1,193,654	+		MPMX19_01153	0.61	+0.5
1,193,654	+		MPMX19_01153	0.61	-0.4
1,193,655	-		MPMX19_01153	0.61	-1.0
1,193,655	-		MPMX19_01153	0.61	-1.0
1,193,655	-		MPMX19_01153	0.61	-2.4
1,193,655	-		MPMX19_01153	0.61	+0.8
1,193,655	-		MPMX19_01153	0.61	-0.6
1,193,655	-		MPMX19_01153	0.61	-0.7
1,193,839	+				-0.1
1,193,840	-				-0.7
1,193,840	-				+1.8
1,193,852	+				-0.5
1,193,852	+				-1.7
1,193,852	+				-1.2
1,193,852	+				-0.0
1,193,853	-				-1.0
1,193,853	-				+0.4
1,193,853	-				-0.5
1,193,914	+		MPMX19_01154	0.16	-2.6
1,193,914	+		MPMX19_01154	0.16	+0.1
1,193,914	+		MPMX19_01154	0.16	+0.6
1,193,914	+		MPMX19_01154	0.16	-1.3
1,193,914	+		MPMX19_01154	0.16	-0.5
1,193,915	-		MPMX19_01154	0.16	+0.6
1,193,915	-		MPMX19_01154	0.16	-0.4
1,193,915	-		MPMX19_01154	0.16	-0.9
1,193,949	+		MPMX19_01154	0.27	+0.0
1,193,949	+		MPMX19_01154	0.27	-1.7
1,193,949	+		MPMX19_01154	0.27	-0.3
1,193,949	+		MPMX19_01154	0.27	-1.1
1,193,949	+		MPMX19_01154	0.27	+1.3
1,193,949	+		MPMX19_01154	0.27	+0.5
1,193,949	+		MPMX19_01154	0.27	-0.8
1,193,949	+		MPMX19_01154	0.27	-0.1
1,193,949	+		MPMX19_01154	0.27	+0.8
1,193,949	+		MPMX19_01154	0.27	-0.3
1,193,949	+		MPMX19_01154	0.27	-0.9
1,193,949	+		MPMX19_01154	0.27	-2.2
1,193,949	+		MPMX19_01154	0.27	-0.1
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	+1.3
1,193,950	-		MPMX19_01154	0.28	-0.6
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	-0.7
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	-2.3
1,193,950	-		MPMX19_01154	0.28	+0.1
1,193,950	-		MPMX19_01154	0.28	+0.6
1,193,950	-		MPMX19_01154	0.28	-1.2
1,193,950	-		MPMX19_01154	0.28	-0.7
1,194,074	+		MPMX19_01154	0.68	-0.2
1,194,074	+		MPMX19_01154	0.68	-0.6
1,194,074	+		MPMX19_01154	0.68	+0.1
1,194,074	+		MPMX19_01154	0.68	-1.7
1,194,075	-		MPMX19_01154	0.69	-2.5
1,194,075	-		MPMX19_01154	0.69	-0.4
1,194,084	+		MPMX19_01154	0.72	-0.8
1,194,084	+		MPMX19_01154	0.72	-0.1
1,194,084	+		MPMX19_01154	0.72	-2.7
1,194,084	+		MPMX19_01154	0.72	+0.2
1,194,085	-		MPMX19_01154	0.72	+0.1
1,194,085	-		MPMX19_01154	0.72	-0.8
1,194,085	-		MPMX19_01154	0.72	+0.5
1,194,085	-		MPMX19_01154	0.72	+1.1
1,194,085	-		MPMX19_01154	0.72	-1.5
1,194,085	-		MPMX19_01154	0.72	-0.5
1,194,085	-		MPMX19_01154	0.72	-1.2
1,194,085	-		MPMX19_01154	0.72	-0.1
1,194,085	-		MPMX19_01154	0.72	-1.0
1,194,085	-		MPMX19_01154	0.72	-1.1
1,194,085	-		MPMX19_01154	0.72	-1.2
1,194,085	-		MPMX19_01154	0.72	+0.4
1,194,085	-		MPMX19_01154	0.72	-0.5
1,194,166	+				+0.0
1,194,166	+				+0.2
1,194,166	+				+0.2
1,194,166	+				+0.7
1,194,166	+				+0.5
1,194,166	+				-0.4
1,194,166	+				+0.4
1,194,166	+				+0.1
1,194,166	+				+0.8
1,194,167	-				-1.8
1,194,167	-				-0.7
1,194,167	-				+0.3
1,194,167	-				-0.0
1,194,191	+				-0.2
1,194,191	+				+0.4
1,194,192	-				+1.2
1,194,192	-				+0.9
1,194,192	-				-1.0
1,194,192	-				-1.8
1,194,192	-				-0.3
1,194,192	-				-0.0
1,194,192	-				-0.4
1,194,192	-				+0.0
1,194,211	+		MPMX19_01155	0.13	+0.5
1,194,211	+		MPMX19_01155	0.13	-0.0
1,194,211	+		MPMX19_01155	0.13	-0.3
1,194,211	+		MPMX19_01155	0.13	-1.1
1,194,211	+		MPMX19_01155	0.13	+0.1
1,194,211	+		MPMX19_01155	0.13	-0.3
1,194,211	+		MPMX19_01155	0.13	-0.0
1,194,211	+		MPMX19_01155	0.13	+0.3
1,194,212	-		MPMX19_01155	0.13	+0.1
1,194,212	-		MPMX19_01155	0.13	-0.8
1,194,212	-		MPMX19_01155	0.13	-1.1
1,194,212	-		MPMX19_01155	0.13	-0.3
1,194,212	-		MPMX19_01155	0.13	-0.5
1,194,331	+		MPMX19_01155	0.42	-0.8
1,194,331	+		MPMX19_01155	0.42	-2.0
1,194,331	+		MPMX19_01155	0.42	-0.4
1,194,461	+		MPMX19_01155	0.74	-0.5
1,194,461	+		MPMX19_01155	0.74	-1.9
1,194,461	+		MPMX19_01155	0.74	+0.8
1,194,461	+		MPMX19_01155	0.74	+0.7
1,194,461	+		MPMX19_01155	0.74	+0.9
1,194,461	+		MPMX19_01155	0.74	-1.1
1,194,462	-		MPMX19_01155	0.75	-0.5
1,194,462	-		MPMX19_01155	0.75	-0.2
1,194,462	-		MPMX19_01155	0.75	+0.3
1,194,553	-				-0.8
1,194,752	+		MPMX19_01156	0.10	-1.1
1,194,753	-		MPMX19_01156	0.10	+0.4
1,194,753	-		MPMX19_01156	0.10	-0.4
1,194,810	+		MPMX19_01156	0.15	-0.2
1,194,810	+		MPMX19_01156	0.15	+0.1
1,194,810	+		MPMX19_01156	0.15	-1.0
1,194,810	+		MPMX19_01156	0.15	-2.8
1,194,810	+		MPMX19_01156	0.15	+0.3
1,194,810	+		MPMX19_01156	0.15	+0.5
1,194,810	+		MPMX19_01156	0.15	-1.0
1,194,810	+		MPMX19_01156	0.15	+0.2
1,194,810	+		MPMX19_01156	0.15	-0.5
1,194,810	+		MPMX19_01156	0.15	+0.2
1,194,810	+		MPMX19_01156	0.15	-0.2
1,194,810	+		MPMX19_01156	0.15	+0.1
1,194,811	-		MPMX19_01156	0.15	-0.5
1,194,811	-		MPMX19_01156	0.15	-0.2
1,194,811	-		MPMX19_01156	0.15	+1.7
1,194,811	-		MPMX19_01156	0.15	-0.1
1,194,811	-		MPMX19_01156	0.15	-0.6
1,194,811	-		MPMX19_01156	0.15	-1.4
1,194,811	-		MPMX19_01156	0.15	-0.8
1,194,811	-		MPMX19_01156	0.15	-1.4
1,194,811	-		MPMX19_01156	0.15	-2.0
1,194,811	-		MPMX19_01156	0.15	-1.3
1,195,131	+		MPMX19_01156	0.38	-1.7
1,195,131	+		MPMX19_01156	0.38	-0.5
1,195,131	+		MPMX19_01156	0.38	+1.5
1,195,132	-		MPMX19_01156	0.38	-0.9
1,195,132	-		MPMX19_01156	0.38	-1.1
1,195,132	-		MPMX19_01156	0.38	-1.2
1,195,177	-		MPMX19_01156	0.42	-0.4
1,195,177	-		MPMX19_01156	0.42	+0.1
1,195,212	+		MPMX19_01156	0.44	+0.5
1,195,212	+		MPMX19_01156	0.44	-0.1
1,195,212	+		MPMX19_01156	0.44	+0.9
1,195,212	+		MPMX19_01156	0.44	-0.7
1,195,212	+		MPMX19_01156	0.44	-0.1
1,195,212	+		MPMX19_01156	0.44	-0.2
1,195,212	+		MPMX19_01156	0.44	-0.2
1,195,212	+		MPMX19_01156	0.44	-0.3
1,195,212	+		MPMX19_01156	0.44	-0.5
1,195,212	+		MPMX19_01156	0.44	-0.5
1,195,212	+		MPMX19_01156	0.44	-0.3
1,195,212	+		MPMX19_01156	0.44	-0.2
1,195,212	+		MPMX19_01156	0.44	-0.5
1,195,212	+		MPMX19_01156	0.44	-0.3
1,195,212	+		MPMX19_01156	0.44	-0.6
1,195,212	+		MPMX19_01156	0.44	-0.1
1,195,212	+		MPMX19_01156	0.44	+1.3
1,195,212	+		MPMX19_01156	0.44	-0.5
1,195,212	+		MPMX19_01156	0.44	-0.4
1,195,213	-		MPMX19_01156	0.44	+0.2
1,195,213	-		MPMX19_01156	0.44	+0.3
1,195,213	-		MPMX19_01156	0.44	-0.8
1,195,213	-		MPMX19_01156	0.44	-1.3
1,195,213	-		MPMX19_01156	0.44	-0.6
1,195,213	-		MPMX19_01156	0.44	-1.1
1,195,213	-		MPMX19_01156	0.44	+0.4
1,195,213	-		MPMX19_01156	0.44	-0.8
1,195,213	-		MPMX19_01156	0.44	-0.2
1,195,213	-		MPMX19_01156	0.44	-0.2
1,195,213	-		MPMX19_01156	0.44	+0.8
1,195,213	-		MPMX19_01156	0.44	-0.7
1,195,213	-		MPMX19_01156	0.44	-1.0
1,195,213	-		MPMX19_01156	0.44	-0.3
1,195,213	-		MPMX19_01156	0.44	+0.2
1,195,213	-		MPMX19_01156	0.44	-0.1
1,195,213	-		MPMX19_01156	0.44	-2.1
1,195,213	-		MPMX19_01156	0.44	+0.0
1,195,213	-		MPMX19_01156	0.44	+0.1
1,195,213	-		MPMX19_01156	0.44	+0.6
1,195,213	-		MPMX19_01156	0.44	+1.0
1,195,213	-		MPMX19_01156	0.44	-2.9
1,195,213	-		MPMX19_01156	0.44	+0.0
1,195,213	-		MPMX19_01156	0.44	-0.1
1,195,213	-		MPMX19_01156	0.44	-0.4
1,195,213	-		MPMX19_01156	0.44	-0.5
1,195,213	-		MPMX19_01156	0.44	+0.0
1,195,213	-		MPMX19_01156	0.44	-0.6
1,195,213	-		MPMX19_01156	0.44	-0.2
1,195,213	-		MPMX19_01156	0.44	+0.8
1,195,213	-		MPMX19_01156	0.44	-0.5
1,195,213	-		MPMX19_01156	0.44	+0.5
1,195,213	-		MPMX19_01156	0.44	-0.6
1,195,213	-		MPMX19_01156	0.44	-0.8
1,195,242	+		MPMX19_01156	0.47	-0.4
1,195,242	+		MPMX19_01156	0.47	+0.2
1,195,243	-		MPMX19_01156	0.47	+1.1
1,195,314	+		MPMX19_01156	0.52	-0.5
1,195,314	+		MPMX19_01156	0.52	+0.2
1,195,315	-		MPMX19_01156	0.52	-0.3
1,195,315	-		MPMX19_01156	0.52	-0.1
1,195,315	-		MPMX19_01156	0.52	-1.8
1,195,315	-		MPMX19_01156	0.52	-0.8
1,195,343	+		MPMX19_01156	0.54	+2.5
1,195,375	-		MPMX19_01156	0.57	-0.6
1,195,432	-		MPMX19_01156	0.61	+0.4
1,195,432	-		MPMX19_01156	0.61	-0.5
1,195,432	-		MPMX19_01156	0.61	-0.1
1,195,476	+		MPMX19_01156	0.64	-1.4
1,195,476	+		MPMX19_01156	0.64	+0.2
1,195,476	+		MPMX19_01156	0.64	+0.7
1,195,476	+		MPMX19_01156	0.64	-0.7
1,195,476	+		MPMX19_01156	0.64	-2.0
1,195,476	+		MPMX19_01156	0.64	-0.1
1,195,476	+		MPMX19_01156	0.64	+0.1
1,195,476	+		MPMX19_01156	0.64	-0.5
1,195,476	+		MPMX19_01156	0.64	+0.4
1,195,476	+		MPMX19_01156	0.64	-0.6
1,195,477	+		MPMX19_01156	0.64	+1.6
1,195,477	-		MPMX19_01156	0.64	-0.2
1,195,477	-		MPMX19_01156	0.64	-0.5
1,195,477	-		MPMX19_01156	0.64	+0.0
1,195,477	-		MPMX19_01156	0.64	-0.1
1,195,477	-		MPMX19_01156	0.64	-1.1
1,195,477	-		MPMX19_01156	0.64	+0.1
1,195,477	-		MPMX19_01156	0.64	+0.4
1,195,477	-		MPMX19_01156	0.64	-0.8
1,195,477	-		MPMX19_01156	0.64	+0.4
1,195,477	-		MPMX19_01156	0.64	+0.7
1,195,689	+		MPMX19_01156	0.80	-0.5
1,195,689	+		MPMX19_01156	0.80	-1.7
1,195,689	+		MPMX19_01156	0.80	-0.6
1,195,689	+		MPMX19_01156	0.80	-0.7
1,195,689	+		MPMX19_01156	0.80	-0.5
1,195,689	+		MPMX19_01156	0.80	+0.1
1,195,689	+		MPMX19_01156	0.80	-1.2
1,195,689	+		MPMX19_01156	0.80	-0.4
1,195,689	+		MPMX19_01156	0.80	-0.3
1,195,689	+		MPMX19_01156	0.80	-1.2
1,195,689	+		MPMX19_01156	0.80	-1.1
1,195,689	+		MPMX19_01156	0.80	+1.4
1,195,689	+		MPMX19_01156	0.80	-0.2
1,195,690	-		MPMX19_01156	0.80	+0.8
1,195,690	-		MPMX19_01156	0.80	+0.4
1,195,690	-		MPMX19_01156	0.80	-0.1
1,195,690	-		MPMX19_01156	0.80	+0.5
1,195,690	-		MPMX19_01156	0.80	+0.9
1,195,690	-		MPMX19_01156	0.80	-1.1
1,195,690	-		MPMX19_01156	0.80	+0.3
1,195,690	-		MPMX19_01156	0.80	-0.5
1,195,690	-		MPMX19_01156	0.80	+1.5
1,195,690	-		MPMX19_01156	0.80	+0.2
1,195,690	-		MPMX19_01156	0.80	-0.8
1,195,690	-		MPMX19_01156	0.80	-0.7
1,195,690	-		MPMX19_01156	0.80	-1.1
1,195,690	-		MPMX19_01156	0.80	+0.1
1,195,690	-		MPMX19_01156	0.80	-0.5
1,195,833	+				-0.1
1,195,833	+				-0.6
1,195,833	+				-0.1
1,195,833	+				+0.4
1,195,834	-				-1.0
1,195,911	+				+3.0
1,195,911	+				+0.1
1,195,911	+				-0.1
1,195,912	-				-0.5
1,195,912	-				-1.3
1,195,912	-				-0.7
1,195,967	+				+0.4
1,195,967	+				-1.3
1,195,968	-				-0.6
1,195,968	-				-0.6
1,195,968	-				+0.1
1,195,968	-				-0.3
1,195,984	-				+1.3
1,196,000	+				-1.0
1,196,366	+		MPMX19_01157	0.43	-1.3
1,196,366	+		MPMX19_01157	0.43	+2.5
1,196,366	+		MPMX19_01157	0.43	-1.3
1,196,366	+		MPMX19_01157	0.43	-1.1
1,196,367	-		MPMX19_01157	0.43	-0.1
1,196,367	-		MPMX19_01157	0.43	-0.1
1,196,367	-		MPMX19_01157	0.43	+0.2
1,196,367	-		MPMX19_01157	0.43	-2.1
1,196,367	-		MPMX19_01157	0.43	-0.1
1,196,468	+		MPMX19_01157	0.55	+0.2
1,196,468	+		MPMX19_01157	0.55	+0.5
1,196,468	+		MPMX19_01157	0.55	-0.8
1,196,468	+		MPMX19_01157	0.55	-0.4
1,196,468	+		MPMX19_01157	0.55	+0.5
1,196,468	+		MPMX19_01157	0.55	+0.5
1,196,468	+		MPMX19_01157	0.55	-0.3
1,196,468	+		MPMX19_01157	0.55	+0.9
1,196,468	+		MPMX19_01157	0.55	+0.2
1,196,468	+		MPMX19_01157	0.55	-0.1
1,196,468	+		MPMX19_01157	0.55	-1.1
1,196,468	+		MPMX19_01157	0.55	+2.1
1,196,469	-		MPMX19_01157	0.55	+0.5
1,196,469	-		MPMX19_01157	0.55	-0.5
1,196,469	-		MPMX19_01157	0.55	-1.3
1,196,469	-		MPMX19_01157	0.55	-0.1
1,196,469	-		MPMX19_01157	0.55	-0.8
1,196,469	-		MPMX19_01157	0.55	+1.5
1,196,469	-		MPMX19_01157	0.55	-1.1
1,196,469	-		MPMX19_01157	0.55	-0.5
1,196,469	-		MPMX19_01157	0.55	-1.4
1,196,611	+		MPMX19_01157	0.72	+0.7
1,196,612	-		MPMX19_01157	0.72	+1.5
1,196,628	-		MPMX19_01157	0.74	-0.7
1,196,628	-		MPMX19_01157	0.74	+1.5
1,196,729	+		MPMX19_01157	0.86	+2.5
1,196,729	+		MPMX19_01157	0.86	+2.2
1,196,729	+		MPMX19_01157	0.86	+1.2
1,196,729	+		MPMX19_01157	0.86	-0.1
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