Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01154

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,192,881	+		MPMX19_01152	0.79	-1.0
1,192,881	+		MPMX19_01152	0.79	+0.8
1,192,881	+		MPMX19_01152	0.79	-1.5
1,192,881	+		MPMX19_01152	0.79	+0.1
1,192,881	+		MPMX19_01152	0.79	+1.3
1,192,881	+		MPMX19_01152	0.79	-0.3
1,192,881	+		MPMX19_01152	0.79	+0.0
1,192,881	+		MPMX19_01152	0.79	+0.0
1,192,881	+		MPMX19_01152	0.79	-0.5
1,192,881	+		MPMX19_01152	0.79	+1.1
1,192,881	+		MPMX19_01152	0.79	-0.1
1,192,881	+		MPMX19_01152	0.79	-1.4
1,192,881	+		MPMX19_01152	0.79	+0.8
1,192,881	+		MPMX19_01152	0.79	-3.1
1,192,881	+		MPMX19_01152	0.79	+2.1
1,192,881	+		MPMX19_01152	0.79	+0.6
1,192,882	-		MPMX19_01152	0.79	+0.9
1,192,882	-		MPMX19_01152	0.79	+1.0
1,192,882	-		MPMX19_01152	0.79	+1.7
1,192,882	-		MPMX19_01152	0.79	-0.2
1,192,882	-		MPMX19_01152	0.79	-0.8
1,192,882	-		MPMX19_01152	0.79	-0.8
1,192,882	-		MPMX19_01152	0.79	-0.3
1,192,882	-		MPMX19_01152	0.79	+0.7
1,192,882	-		MPMX19_01152	0.79	-1.5
1,192,882	-		MPMX19_01152	0.79	+0.1
1,192,882	-		MPMX19_01152	0.79	-0.4
1,192,882	-		MPMX19_01152	0.79	+0.5
1,192,882	-		MPMX19_01152	0.79	-0.4
1,192,914	+		MPMX19_01152	0.81	+0.8
1,192,915	-		MPMX19_01152	0.81	+0.6
1,192,915	-		MPMX19_01152	0.81	+0.2
1,192,915	-		MPMX19_01152	0.81	-0.1
1,192,915	-		MPMX19_01152	0.81	-1.1
1,192,915	-		MPMX19_01152	0.81	+0.4
1,192,915	-		MPMX19_01152	0.81	-0.5
1,192,915	-		MPMX19_01152	0.81	-1.1
1,192,941	+		MPMX19_01152	0.81	-0.3
1,192,941	+		MPMX19_01152	0.81	+0.2
1,192,942	-		MPMX19_01152	0.82	+1.1
1,192,942	-		MPMX19_01152	0.82	+0.2
1,192,942	-		MPMX19_01152	0.82	-0.3
1,193,061	+		MPMX19_01152	0.86	+1.4
1,193,061	+		MPMX19_01152	0.86	+0.5
1,193,061	+		MPMX19_01152	0.86	-0.3
1,193,061	+		MPMX19_01152	0.86	-2.1
1,193,061	+		MPMX19_01152	0.86	-1.0
1,193,062	-		MPMX19_01152	0.86	+0.5
1,193,062	-		MPMX19_01152	0.86	-0.9
1,193,062	-		MPMX19_01152	0.86	-0.1
1,193,062	-		MPMX19_01152	0.86	+0.7
1,193,062	-		MPMX19_01152	0.86	+0.5
1,193,062	-		MPMX19_01152	0.86	-1.5
1,193,062	-		MPMX19_01152	0.86	+0.1
1,193,062	-		MPMX19_01152	0.86	+0.4
1,193,062	-		MPMX19_01152	0.86	+1.0
1,193,062	-		MPMX19_01152	0.86	-2.1
1,193,163	+		MPMX19_01152	0.89	+0.8
1,193,163	+		MPMX19_01152	0.89	-0.1
1,193,163	+		MPMX19_01152	0.89	-1.0
1,193,163	+		MPMX19_01152	0.89	-0.8
1,193,163	+		MPMX19_01152	0.89	-0.7
1,193,163	+		MPMX19_01152	0.89	-2.3
1,193,163	+		MPMX19_01152	0.89	+0.2
1,193,163	+		MPMX19_01152	0.89	-0.2
1,193,163	+		MPMX19_01152	0.89	-1.4
1,193,163	+		MPMX19_01152	0.89	+0.1
1,193,163	+		MPMX19_01152	0.89	+0.8
1,193,163	+		MPMX19_01152	0.89	+0.3
1,193,163	+		MPMX19_01152	0.89	-0.5
1,193,163	+		MPMX19_01152	0.89	+0.8
1,193,163	+		MPMX19_01152	0.89	+0.7
1,193,163	+		MPMX19_01152	0.89	+0.3
1,193,163	+		MPMX19_01152	0.89	-1.4
1,193,163	+		MPMX19_01152	0.89	+0.2
1,193,163	+		MPMX19_01152	0.89	+0.5
1,193,163	+		MPMX19_01152	0.89	+0.5
1,193,163	+		MPMX19_01152	0.89	-2.1
1,193,164	-		MPMX19_01152	0.89	-1.6
1,193,164	-		MPMX19_01152	0.89	-0.7
1,193,164	-		MPMX19_01152	0.89	-1.4
1,193,164	-		MPMX19_01152	0.89	-0.2
1,193,164	-		MPMX19_01152	0.89	-0.4
1,193,164	-		MPMX19_01152	0.89	-0.2
1,193,164	-		MPMX19_01152	0.89	-0.7
1,193,164	-		MPMX19_01152	0.89	+2.1
1,193,164	-		MPMX19_01152	0.89	+0.5
1,193,164	-		MPMX19_01152	0.89	-0.6
1,193,164	-		MPMX19_01152	0.89	-0.5
1,193,164	-		MPMX19_01152	0.89	-0.5
1,193,164	-		MPMX19_01152	0.89	-0.8
1,193,164	-		MPMX19_01152	0.89	+1.5
1,193,164	-		MPMX19_01152	0.89	-0.6
1,193,164	-		MPMX19_01152	0.89	+0.7
1,193,164	-		MPMX19_01152	0.89	+1.2
1,193,164	-		MPMX19_01152	0.89	-0.5
1,193,164	-		MPMX19_01152	0.89	-0.5
1,193,164	-		MPMX19_01152	0.89	+0.3
1,193,164	-		MPMX19_01152	0.89	+1.1
1,193,164	-		MPMX19_01152	0.89	-0.1
1,193,394	+				-0.9
1,193,394	+				-0.3
1,193,394	+				-1.1
1,193,395	-				-0.2
1,193,395	-				+1.0
1,193,395	-				+0.2
1,193,395	-				-0.1
1,193,395	-				-0.8
1,193,395	-				-0.3
1,193,395	-				-0.3
1,193,395	-				-0.9
1,193,395	-				+0.1
1,193,395	-				+1.5
1,193,396	+				-1.2
1,193,406	+				-0.5
1,193,418	+				+0.0
1,193,419	-				-1.0
1,193,419	-				-1.9
1,193,422	+				-0.5
1,193,422	+				-1.3
1,193,422	+				-0.1
1,193,423	-				-0.7
1,193,423	-				-1.1
1,193,423	-				-1.2
1,193,423	-				-0.1
1,193,654	+		MPMX19_01153	0.61	+0.4
1,193,654	+		MPMX19_01153	0.61	+0.5
1,193,654	+		MPMX19_01153	0.61	-0.4
1,193,655	-		MPMX19_01153	0.61	-1.0
1,193,655	-		MPMX19_01153	0.61	-1.0
1,193,655	-		MPMX19_01153	0.61	-2.4
1,193,655	-		MPMX19_01153	0.61	+0.8
1,193,655	-		MPMX19_01153	0.61	-0.6
1,193,655	-		MPMX19_01153	0.61	-0.7
1,193,839	+				-0.1
1,193,840	-				-0.7
1,193,840	-				+1.8
1,193,852	+				-0.5
1,193,852	+				-1.7
1,193,852	+				-1.2
1,193,852	+				-0.0
1,193,853	-				-1.0
1,193,853	-				+0.4
1,193,853	-				-0.5
1,193,914	+		MPMX19_01154	0.16	-2.6
1,193,914	+		MPMX19_01154	0.16	+0.1
1,193,914	+		MPMX19_01154	0.16	+0.6
1,193,914	+		MPMX19_01154	0.16	-1.3
1,193,914	+		MPMX19_01154	0.16	-0.5
1,193,915	-		MPMX19_01154	0.16	+0.6
1,193,915	-		MPMX19_01154	0.16	-0.4
1,193,915	-		MPMX19_01154	0.16	-0.9
1,193,949	+		MPMX19_01154	0.27	+0.0
1,193,949	+		MPMX19_01154	0.27	-1.7
1,193,949	+		MPMX19_01154	0.27	-0.3
1,193,949	+		MPMX19_01154	0.27	-1.1
1,193,949	+		MPMX19_01154	0.27	+1.3
1,193,949	+		MPMX19_01154	0.27	+0.5
1,193,949	+		MPMX19_01154	0.27	-0.8
1,193,949	+		MPMX19_01154	0.27	-0.1
1,193,949	+		MPMX19_01154	0.27	+0.8
1,193,949	+		MPMX19_01154	0.27	-0.3
1,193,949	+		MPMX19_01154	0.27	-0.9
1,193,949	+		MPMX19_01154	0.27	-2.2
1,193,949	+		MPMX19_01154	0.27	-0.1
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	+1.3
1,193,950	-		MPMX19_01154	0.28	-0.6
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	-0.7
1,193,950	-		MPMX19_01154	0.28	-0.2
1,193,950	-		MPMX19_01154	0.28	-2.3
1,193,950	-		MPMX19_01154	0.28	+0.1
1,193,950	-		MPMX19_01154	0.28	+0.6
1,193,950	-		MPMX19_01154	0.28	-1.2
1,193,950	-		MPMX19_01154	0.28	-0.7
1,194,074	+		MPMX19_01154	0.68	-0.2
1,194,074	+		MPMX19_01154	0.68	-0.6
1,194,074	+		MPMX19_01154	0.68	+0.1
1,194,074	+		MPMX19_01154	0.68	-1.7
1,194,075	-		MPMX19_01154	0.69	-2.5
1,194,075	-		MPMX19_01154	0.69	-0.4
1,194,084	+		MPMX19_01154	0.72	-0.8
1,194,084	+		MPMX19_01154	0.72	-0.1
1,194,084	+		MPMX19_01154	0.72	-2.7
1,194,084	+		MPMX19_01154	0.72	+0.2
1,194,085	-		MPMX19_01154	0.72	+0.1
1,194,085	-		MPMX19_01154	0.72	-0.8
1,194,085	-		MPMX19_01154	0.72	+0.5
1,194,085	-		MPMX19_01154	0.72	+1.1
1,194,085	-		MPMX19_01154	0.72	-1.5
1,194,085	-		MPMX19_01154	0.72	-0.5
1,194,085	-		MPMX19_01154	0.72	-1.2
1,194,085	-		MPMX19_01154	0.72	-0.1
1,194,085	-		MPMX19_01154	0.72	-1.0
1,194,085	-		MPMX19_01154	0.72	-1.1
1,194,085	-		MPMX19_01154	0.72	-1.2
1,194,085	-		MPMX19_01154	0.72	+0.4
1,194,085	-		MPMX19_01154	0.72	-0.5
1,194,166	+				+0.0
1,194,166	+				+0.2
1,194,166	+				+0.2
1,194,166	+				+0.7
1,194,166	+				+0.5
1,194,166	+				-0.4
1,194,166	+				+0.4
1,194,166	+				+0.1
1,194,166	+				+0.8
1,194,167	-				-1.8
1,194,167	-				-0.7
1,194,167	-				+0.3
1,194,167	-				-0.0
1,194,191	+				-0.2
1,194,191	+				+0.4
1,194,192	-				+1.2
1,194,192	-				+0.9
1,194,192	-				-1.0
1,194,192	-				-1.8
1,194,192	-				-0.3
1,194,192	-				-0.0
1,194,192	-				-0.4
1,194,192	-				+0.0
1,194,211	+		MPMX19_01155	0.13	+0.5
1,194,211	+		MPMX19_01155	0.13	-0.0
1,194,211	+		MPMX19_01155	0.13	-0.3
1,194,211	+		MPMX19_01155	0.13	-1.1
1,194,211	+		MPMX19_01155	0.13	+0.1
1,194,211	+		MPMX19_01155	0.13	-0.3
1,194,211	+		MPMX19_01155	0.13	-0.0
1,194,211	+		MPMX19_01155	0.13	+0.3
1,194,212	-		MPMX19_01155	0.13	+0.1
1,194,212	-		MPMX19_01155	0.13	-0.8
1,194,212	-		MPMX19_01155	0.13	-1.1
1,194,212	-		MPMX19_01155	0.13	-0.3
1,194,212	-		MPMX19_01155	0.13	-0.5
1,194,331	+		MPMX19_01155	0.42	-0.8
1,194,331	+		MPMX19_01155	0.42	-2.0
1,194,331	+		MPMX19_01155	0.42	-0.4
1,194,461	+		MPMX19_01155	0.74	-0.5
1,194,461	+		MPMX19_01155	0.74	-1.9
1,194,461	+		MPMX19_01155	0.74	+0.8
1,194,461	+		MPMX19_01155	0.74	+0.7
1,194,461	+		MPMX19_01155	0.74	+0.9
1,194,461	+		MPMX19_01155	0.74	-1.1
1,194,462	-		MPMX19_01155	0.75	-0.5
1,194,462	-		MPMX19_01155	0.75	-0.2
1,194,462	-		MPMX19_01155	0.75	+0.3
1,194,553	-				-0.8
1,194,752	+		MPMX19_01156	0.10	-1.1
1,194,753	-		MPMX19_01156	0.10	+0.4
1,194,753	-		MPMX19_01156	0.10	-0.4
1,194,810	+		MPMX19_01156	0.15	-0.2
1,194,810	+		MPMX19_01156	0.15	+0.1
1,194,810	+		MPMX19_01156	0.15	-1.0
1,194,810	+		MPMX19_01156	0.15	-2.8
1,194,810	+		MPMX19_01156	0.15	+0.3
1,194,810	+		MPMX19_01156	0.15	+0.5
1,194,810	+		MPMX19_01156	0.15	-1.0
1,194,810	+		MPMX19_01156	0.15	+0.2
1,194,810	+		MPMX19_01156	0.15	-0.5
1,194,810	+		MPMX19_01156	0.15	+0.2
1,194,810	+		MPMX19_01156	0.15	-0.2
1,194,810	+		MPMX19_01156	0.15	+0.1
1,194,811	-		MPMX19_01156	0.15	-0.5
1,194,811	-		MPMX19_01156	0.15	-0.2
1,194,811	-		MPMX19_01156	0.15	+1.7
1,194,811	-		MPMX19_01156	0.15	-0.1
1,194,811	-		MPMX19_01156	0.15	-0.6
1,194,811	-		MPMX19_01156	0.15	-1.4
1,194,811	-		MPMX19_01156	0.15	-0.8
1,194,811	-		MPMX19_01156	0.15	-1.4
1,194,811	-		MPMX19_01156	0.15	-2.0
1,194,811	-		MPMX19_01156	0.15	-1.3
1,195,131	+		MPMX19_01156	0.38	-1.7
1,195,131	+		MPMX19_01156	0.38	-0.5
1,195,131	+		MPMX19_01156	0.38	+1.5
1,195,132	-		MPMX19_01156	0.38	-0.9
1,195,132	-		MPMX19_01156	0.38	-1.1
1,195,132	-		MPMX19_01156	0.38	-1.2