Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01149

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,184,878	-		MPMX19_01148	0.39	-0.5
1,184,878	-		MPMX19_01148	0.39	+0.4
1,185,078	+		MPMX19_01148	0.52	-2.4
1,185,078	+		MPMX19_01148	0.52	-1.3
1,185,078	+		MPMX19_01148	0.52	+0.1
1,185,078	+		MPMX19_01148	0.52	+0.5
1,185,078	+		MPMX19_01148	0.52	-0.2
1,185,078	+		MPMX19_01148	0.52	-0.1
1,185,078	+		MPMX19_01148	0.52	-0.2
1,185,078	+		MPMX19_01148	0.52	-0.4
1,185,078	+		MPMX19_01148	0.52	-0.2
1,185,078	+		MPMX19_01148	0.52	+1.1
1,185,078	+		MPMX19_01148	0.52	-0.5
1,185,078	+		MPMX19_01148	0.52	+0.1
1,185,079	-		MPMX19_01148	0.52	-1.0
1,185,079	-		MPMX19_01148	0.52	-0.6
1,185,079	-		MPMX19_01148	0.52	+0.9
1,185,079	-		MPMX19_01148	0.52	+1.0
1,185,079	-		MPMX19_01148	0.52	+1.2
1,185,079	-		MPMX19_01148	0.52	-2.0
1,185,079	-		MPMX19_01148	0.52	-0.9
1,185,079	-		MPMX19_01148	0.52	+0.5
1,185,079	-		MPMX19_01148	0.52	-1.1
1,185,079	-		MPMX19_01148	0.52	-1.5
1,185,079	-		MPMX19_01148	0.52	-0.9
1,185,079	-		MPMX19_01148	0.52	-1.3
1,185,118	+		MPMX19_01148	0.54	-0.5
1,185,118	+		MPMX19_01148	0.54	+1.2
1,185,118	+		MPMX19_01148	0.54	-0.8
1,185,119	-		MPMX19_01148	0.54	-1.5
1,185,119	-		MPMX19_01148	0.54	+0.6
1,185,119	-		MPMX19_01148	0.54	-2.4
1,185,119	-		MPMX19_01148	0.54	-1.5
1,185,119	-		MPMX19_01148	0.54	+0.9
1,185,119	-		MPMX19_01148	0.54	+0.9
1,185,119	-		MPMX19_01148	0.54	-0.1
1,185,160	-		MPMX19_01148	0.57	-0.3
1,185,687	+				-0.5
1,185,687	+				-0.4
1,185,687	+				-0.4
1,185,687	+				+0.9
1,185,687	+				-0.3
1,185,687	+				-2.0
1,185,687	+				-1.5
1,185,688	-				+0.5
1,185,688	-				+0.8
1,185,688	-				-0.1
1,185,688	-				+0.1
1,185,688	-				+1.5
1,185,835	+				-0.1
1,185,835	+				-1.3
1,185,835	+				-0.8
1,185,835	+				+0.3
1,185,835	+				+0.3
1,185,835	+				-2.7
1,185,835	+				-0.7
1,185,836	-				-1.8
1,185,836	-				-1.2
1,185,836	-				-1.0
1,185,836	-				-0.9
1,185,836	-				-1.9
1,185,836	-				+1.2
1,185,836	-				-0.7
1,185,836	-				+0.8
1,185,836	-				+0.7
1,185,836	-				-0.7
1,185,836	-				+0.6
1,185,836	-				-0.8
1,185,836	-				-0.8
1,185,900	+				+0.1
1,185,901	-				-1.2
1,185,901	-				+0.7
1,185,901	-				+0.5
1,185,950	+				+1.2
1,185,950	+				+0.3
1,185,950	+				+1.5
1,185,950	+				+0.2
1,185,950	+				-0.0
1,185,950	+				+1.3
1,185,950	+				+0.9
1,185,950	+				-2.0
1,185,950	+				+0.1
1,185,951	-				-2.3
1,185,951	-				-1.5
1,185,951	-				-1.0
1,185,951	-				-0.2
1,185,951	-				-0.3
1,185,951	-				+0.4
1,185,951	-				-1.2
1,185,951	-				+0.4
1,185,951	-				-0.1
1,185,951	-				+0.5
1,185,951	-				-2.1
1,185,954	+				-0.1
1,185,954	+				-0.8
1,185,954	+				-1.3
1,185,955	-				-1.5
1,185,955	-				-1.1
1,185,955	-				+0.2
1,185,995	+				+1.2
1,185,995	+				+0.9
1,185,995	+				-0.1
1,185,995	+				-0.8
1,185,995	+				+1.1
1,185,995	+				-1.3
1,185,995	+				-0.1
1,185,996	-				-1.3
1,185,996	-				+0.3
1,185,996	-				-0.1
1,185,996	-				-0.7
1,185,996	-				-0.7
1,185,996	-				-0.6
1,186,343	+		MPMX19_01149	0.23	-1.2
1,186,343	+		MPMX19_01149	0.23	-0.7
1,186,343	+		MPMX19_01149	0.23	-1.5
1,186,343	+		MPMX19_01149	0.23	-0.1
1,186,343	+		MPMX19_01149	0.23	-0.2
1,186,343	+		MPMX19_01149	0.23	-0.2
1,186,344	-		MPMX19_01149	0.23	-0.1
1,186,344	-		MPMX19_01149	0.23	-0.4
1,186,344	-		MPMX19_01149	0.23	-2.3
1,186,344	-		MPMX19_01149	0.23	-0.7
1,186,344	-		MPMX19_01149	0.23	+1.8
1,186,344	-		MPMX19_01149	0.23	+1.1
1,186,344	-		MPMX19_01149	0.23	-1.4
1,186,344	-		MPMX19_01149	0.23	-2.0
1,186,344	-		MPMX19_01149	0.23	+0.3
1,186,511	+		MPMX19_01149	0.30	+0.0
1,186,589	+		MPMX19_01149	0.34	+0.8
1,186,613	+		MPMX19_01149	0.35	-1.3
1,186,613	+		MPMX19_01149	0.35	-1.4
1,186,613	+		MPMX19_01149	0.35	-0.1
1,186,614	-		MPMX19_01149	0.35	-0.7
1,186,614	-		MPMX19_01149	0.35	-0.1
1,186,614	-		MPMX19_01149	0.35	-0.8
1,186,614	-		MPMX19_01149	0.35	-0.7
1,186,637	+		MPMX19_01149	0.36	-1.1
1,186,637	+		MPMX19_01149	0.36	-1.8
1,186,637	+		MPMX19_01149	0.36	-1.8
1,186,637	+		MPMX19_01149	0.36	-0.8
1,186,637	+		MPMX19_01149	0.36	+1.8
1,186,637	+		MPMX19_01149	0.36	-1.0
1,186,637	+		MPMX19_01149	0.36	+0.3
1,186,637	+		MPMX19_01149	0.36	-0.4
1,186,637	+		MPMX19_01149	0.36	-0.8
1,186,637	+		MPMX19_01149	0.36	+0.9
1,186,638	-		MPMX19_01149	0.36	-1.8
1,186,638	-		MPMX19_01149	0.36	-0.7
1,186,638	-		MPMX19_01149	0.36	+0.1
1,186,712	+		MPMX19_01149	0.40	-0.1
1,186,712	+		MPMX19_01149	0.40	+0.5
1,186,712	+		MPMX19_01149	0.40	+0.3
1,186,713	-		MPMX19_01149	0.40	-1.3
1,186,952	+		MPMX19_01149	0.51	-1.0
1,186,953	-		MPMX19_01149	0.51	-0.2
1,186,953	-		MPMX19_01149	0.51	-2.2
1,187,571	+		MPMX19_01149	0.80	-1.3
1,187,571	+		MPMX19_01149	0.80	-1.1
1,187,572	-		MPMX19_01149	0.80	-1.8
1,187,819	+				-0.3
1,187,819	+				+0.2
1,187,819	+				-0.5
1,187,819	+				-1.8
1,187,819	+				+0.2
1,187,819	+				+2.1
1,187,819	+				-0.4
1,187,819	+				+0.9
1,187,819	+				-0.9
1,187,820	-				-0.2
1,187,820	-				-1.1
1,187,820	-				+0.1
1,187,820	-				-0.5
1,187,820	-				+0.3
1,187,820	-				-1.5
1,187,820	-				+0.9
1,187,820	-				-0.6
1,187,820	-				-1.0
1,188,072	+				+0.2
1,188,072	+				-1.1
1,188,072	+				-1.1
1,188,072	+				-0.2
1,188,072	+				-0.4
1,188,072	+				-1.2
1,188,072	+				-0.3
1,188,072	+				-1.8
1,188,072	+				-0.9
1,188,072	+				-1.5
1,188,072	+				-0.3
1,188,073	-				-1.1
1,188,073	-				-0.1
1,188,073	-				+1.1
1,188,073	-				-0.2
1,188,073	-				-0.5
1,188,073	-				+0.1
1,188,073	-				+0.1
1,188,073	-				-0.1
1,188,073	-				+1.1
1,188,073	-				-0.8
1,188,073	-				-1.7
1,188,073	-				-0.2
1,188,073	-				-1.1
1,188,074	+				-0.4
1,188,074	+				-1.3
1,188,074	+				-0.5
1,188,074	+				-0.3
1,188,074	+				+0.7
1,188,074	+				+0.9
1,188,074	+				-0.5
1,188,074	+				-1.7
1,188,074	+				+0.7
1,188,074	+				-2.5
1,188,074	+				-0.5
1,188,074	+				-0.6
1,188,074	+				-0.8
1,188,074	+				+1.2
1,188,074	+				+1.0
1,188,074	+				-1.0
1,188,074	+				+0.1
1,188,074	+				+0.2
1,188,074	+				+0.5
1,188,074	+				-0.8
1,188,074	+				-0.3
1,188,074	+				-2.0
1,188,074	+				-1.3
1,188,074	+				-0.5
1,188,074	+				+0.5
1,188,074	+				-1.3
1,188,074	+				-0.1
1,188,074	+				+0.9
1,188,074	+				-0.5
1,188,074	+				-0.7
1,188,074	+				-0.8
1,188,074	+				+0.1
1,188,074	+				+0.3
1,188,074	+				+0.2
1,188,074	+				-0.4
1,188,075	-				+0.7
1,188,075	-				-0.1
1,188,075	-				+0.2
1,188,075	-				-0.1
1,188,075	-				+1.0
1,188,075	-				-0.1
1,188,075	-				+1.1
1,188,075	-				+0.0
1,188,075	-				-0.1
1,188,075	-				+0.9
1,188,075	-				+1.1
1,188,075	-				+1.8
1,188,075	-				-0.8
1,188,075	-				+0.9
1,188,075	-				+0.2
1,188,075	-				-1.2
1,188,075	-				+0.3
1,188,075	-				-0.5
1,188,075	-				-0.9
1,188,075	-				-0.9
1,188,075	-				+0.3
1,188,075	-				+0.1
1,188,075	-				+1.5
1,188,075	-				-0.1
1,188,075	-				-1.7
1,188,075	-				-0.7
1,188,075	-				+0.5
1,188,075	-				-1.1
1,188,075	-				-1.7
1,188,075	-				+0.1
1,188,075	-				+1.5
1,188,075	-				+0.2
1,188,075	-				-0.2
1,188,075	-				-0.3
1,188,075	-				+0.6
1,188,075	-				-1.7
1,188,075	-				+1.0
1,188,092	+				-0.7
1,188,092	+				-1.1
1,188,092	+				-0.1
1,188,093	-				-0.1
1,188,093	-				+0.2
1,188,099	+				-1.1
1,188,099	+				-0.3
1,188,100	-				+0.9
1,188,100	-				-0.6
1,188,100	-				-1.8
1,188,100	-				-0.5
1,188,100	-				+0.3
1,188,107	-				-1.1
1,188,131	+				+0.7
1,188,131	+				-0.1
1,188,131	+				-0.7
1,188,132	-				+1.3
1,188,132	-				+0.0
1,188,326	+		MPMX19_01150	0.23	+0.1
1,188,326	+		MPMX19_01150	0.23	-0.1
1,188,326	+		MPMX19_01150	0.23	-0.5
1,188,326	+		MPMX19_01150	0.23	-0.6
1,188,326	+		MPMX19_01150	0.23	+1.0
1,188,327	-		MPMX19_01150	0.23	-0.1
1,188,327	-		MPMX19_01150	0.23	+0.7
1,188,327	-		MPMX19_01150	0.23	+0.5
1,188,327	-		MPMX19_01150	0.23	-0.8
1,188,327	-		MPMX19_01150	0.23	+0.6
1,188,421	+		MPMX19_01150	0.41	+1.3
1,188,422	-		MPMX19_01150	0.41	+0.9
1,188,422	-		MPMX19_01150	0.41	-1.7
1,188,422	-		MPMX19_01150	0.41	+0.1
1,188,428	+		MPMX19_01150	0.42	+1.3
1,188,429	-		MPMX19_01150	0.42	+0.2
1,188,458	+		MPMX19_01150	0.48	+0.4
1,188,458	+		MPMX19_01150	0.48	+0.6
1,188,458	+		MPMX19_01150	0.48	+1.8
1,188,458	+		MPMX19_01150	0.48	-1.3
1,188,458	+		MPMX19_01150	0.48	-0.4
1,188,458	+		MPMX19_01150	0.48	-0.5
1,188,458	+		MPMX19_01150	0.48	-0.1
1,188,458	+		MPMX19_01150	0.48	+0.3
1,188,458	+		MPMX19_01150	0.48	-0.6
1,188,458	+		MPMX19_01150	0.48	-0.1
1,188,458	+		MPMX19_01150	0.48	-0.3
1,188,458	+		MPMX19_01150	0.48	-0.1
1,188,458	+		MPMX19_01150	0.48	+0.8
1,188,459	-		MPMX19_01150	0.48	-1.2
1,188,459	-		MPMX19_01150	0.48	-0.4
1,188,459	-		MPMX19_01150	0.48	-0.4
1,188,459	-		MPMX19_01150	0.48	-0.2
1,188,459	-		MPMX19_01150	0.48	+0.3
1,188,459	-		MPMX19_01150	0.48	+1.5
1,188,459	-		MPMX19_01150	0.48	-0.8
1,188,459	-		MPMX19_01150	0.48	-0.6
1,188,715	+				-0.1
1,188,716	-				+1.5
1,188,716	-				+0.4
1,188,716	-				-0.1
1,188,725	+				+0.4
1,188,725	+				-1.7
1,188,725	+				-0.6
1,188,725	+				+0.6
1,188,725	+				-2.2
1,188,725	+				-0.2
1,188,726	-				-0.6
1,188,726	-				-1.3
1,188,747	+				+1.3
1,188,747	+				-0.2
1,188,747	+				-0.3
1,188,747	+				-0.5
1,188,748	-				-1.5
1,188,748	-				-1.4
1,188,748	-				+0.2
1,188,748	-				-0.3
1,188,748	-				-0.2
1,188,748	-				-0.8
1,188,748	-				-1.1
1,188,766	+				-3.5
1,188,766	+				-1.2
1,188,766	+				-0.8
1,188,766	+				-1.3
1,188,766	+				-0.0
1,188,766	+				-0.7
1,188,766	+				+0.4
1,188,766	+				-1.3
1,188,766	+				-2.0
1,188,767	-				+0.3
1,188,767	-				+1.1
1,188,767	-				-0.2
1,188,767	-				-0.8
1,188,767	-				-2.3
1,188,767	-				+1.8
1,188,768	-				-0.5