Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01121

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,155,057	+				+0.7
1,155,057	+				+0.3
1,155,057	+				-0.8
1,155,057	+				-1.7
1,155,057	+				+0.8
1,155,057	+				-1.1
1,155,057	+				-1.1
1,155,058	-				-0.3
1,155,253	+		MPMX19_01120	0.34	+0.6
1,155,576	+		MPMX19_01120	0.73	-0.3
1,155,576	+		MPMX19_01120	0.73	-0.7
1,155,576	+		MPMX19_01120	0.73	-1.1
1,155,576	+		MPMX19_01120	0.73	-0.1
1,155,576	+		MPMX19_01120	0.73	-2.0
1,155,576	+		MPMX19_01120	0.73	-0.0
1,155,576	+		MPMX19_01120	0.73	+0.3
1,155,576	+		MPMX19_01120	0.73	+0.2
1,155,576	+		MPMX19_01120	0.73	+1.2
1,155,576	+		MPMX19_01120	0.73	-0.1
1,155,576	+		MPMX19_01120	0.73	+1.0
1,155,576	+		MPMX19_01120	0.73	-0.0
1,155,576	+		MPMX19_01120	0.73	-1.2
1,155,576	+		MPMX19_01120	0.73	-1.2
1,155,576	+		MPMX19_01120	0.73	+1.7
1,155,576	+		MPMX19_01120	0.73	-0.6
1,155,576	+		MPMX19_01120	0.73	-0.5
1,155,577	-		MPMX19_01120	0.74	+1.1
1,155,577	-		MPMX19_01120	0.74	+1.5
1,155,577	-		MPMX19_01120	0.74	+1.2
1,155,577	-		MPMX19_01120	0.74	-0.7
1,155,577	-		MPMX19_01120	0.74	-0.6
1,155,577	-		MPMX19_01120	0.74	+0.9
1,155,577	-		MPMX19_01120	0.74	+0.2
1,155,577	-		MPMX19_01120	0.74	-0.8
1,155,606	+		MPMX19_01120	0.77	-0.7
1,155,606	+		MPMX19_01120	0.77	+0.5
1,155,606	+		MPMX19_01120	0.77	-1.2
1,155,606	+		MPMX19_01120	0.77	+0.8
1,155,607	-		MPMX19_01120	0.77	+1.2
1,155,607	-		MPMX19_01120	0.77	-1.5
1,155,615	+		MPMX19_01120	0.78	-0.4
1,155,615	+		MPMX19_01120	0.78	-0.2
1,155,615	+		MPMX19_01120	0.78	+0.2
1,155,615	+		MPMX19_01120	0.78	+0.2
1,155,615	+		MPMX19_01120	0.78	+0.7
1,155,616	-		MPMX19_01120	0.78	+1.6
1,155,616	-		MPMX19_01120	0.78	-2.0
1,155,616	-		MPMX19_01120	0.78	-0.7
1,155,679	-		MPMX19_01120	0.86	+0.3
1,155,926	+		MPMX19_01121	0.11	+0.8
1,155,926	+		MPMX19_01121	0.11	+1.1
1,155,927	-		MPMX19_01121	0.11	-1.0
1,155,927	-		MPMX19_01121	0.11	-0.1
1,155,927	-		MPMX19_01121	0.11	-1.4
1,155,927	-		MPMX19_01121	0.11	-0.3
1,156,349	+		MPMX19_01121	0.62	+0.9
1,156,349	+		MPMX19_01121	0.62	+0.1
1,156,349	+		MPMX19_01121	0.62	+0.1
1,156,349	+		MPMX19_01121	0.62	-0.7
1,156,349	+		MPMX19_01121	0.62	-0.0
1,156,350	-		MPMX19_01121	0.62	+1.3
1,156,350	-		MPMX19_01121	0.62	+1.5
1,156,350	-		MPMX19_01121	0.62	-0.6
1,156,406	+		MPMX19_01121	0.69	+0.7
1,156,407	-		MPMX19_01121	0.69	-1.3
1,156,407	-		MPMX19_01121	0.69	-0.7
1,156,496	+		MPMX19_01121	0.80	+0.1
1,156,496	+		MPMX19_01121	0.80	-1.4
1,156,496	+		MPMX19_01121	0.80	-0.1
1,156,496	+		MPMX19_01121	0.80	-0.7
1,156,496	+		MPMX19_01121	0.80	-0.3
1,156,497	-		MPMX19_01121	0.80	+1.2
1,156,497	-		MPMX19_01121	0.80	+0.2
1,156,497	-		MPMX19_01121	0.80	-0.8
1,156,497	-		MPMX19_01121	0.80	-2.7
1,156,550	+		MPMX19_01121	0.86	+0.2
1,156,550	+		MPMX19_01121	0.86	+0.7
1,156,550	+		MPMX19_01121	0.86	+0.4
1,156,550	+		MPMX19_01121	0.86	+0.6
1,156,550	+		MPMX19_01121	0.86	+0.6
1,156,550	+		MPMX19_01121	0.86	-0.6
1,156,550	+		MPMX19_01121	0.86	-0.4
1,156,550	+		MPMX19_01121	0.86	+0.1
1,156,550	+		MPMX19_01121	0.86	+2.5
1,156,550	+		MPMX19_01121	0.86	+0.3
1,156,550	+		MPMX19_01121	0.86	-1.2
1,156,550	+		MPMX19_01121	0.86	-0.2
1,156,550	+		MPMX19_01121	0.86	+0.1
1,156,550	+		MPMX19_01121	0.86	-0.3
1,156,551	-		MPMX19_01121	0.86	-0.6
1,156,551	-		MPMX19_01121	0.86	-0.2
1,156,551	-		MPMX19_01121	0.86	-0.4
1,156,551	-		MPMX19_01121	0.86	-0.5
1,156,551	-		MPMX19_01121	0.86	+0.7
1,156,551	-		MPMX19_01121	0.86	-0.9
1,156,551	-		MPMX19_01121	0.86	-0.4
1,156,551	-		MPMX19_01121	0.86	+0.6
1,156,551	-		MPMX19_01121	0.86	-0.3
1,156,551	-		MPMX19_01121	0.86	+1.1
1,156,551	-		MPMX19_01121	0.86	+0.7
1,156,551	-		MPMX19_01121	0.86	-0.3
1,156,551	-		MPMX19_01121	0.86	-0.8
1,156,551	-		MPMX19_01121	0.86	-0.0
1,156,551	-		MPMX19_01121	0.86	+1.1
1,156,551	-		MPMX19_01121	0.86	-0.5
1,156,564	-		MPMX19_01121	0.88	+0.8
1,156,683	+				-0.1
1,156,683	+				+0.6
1,156,683	+				-1.0
1,156,683	+				-1.3
1,156,683	+				+0.3
1,156,683	+				+1.3
1,156,683	+				-0.6
1,156,683	+				-1.5
1,156,683	+				+0.1
1,156,684	-				+0.5
1,156,684	-				-1.0
1,156,684	-				-0.3
1,156,684	-				-0.3
1,156,684	-				-0.1
1,156,723	+				-1.5
1,156,723	+				+0.2
1,156,723	+				-1.7
1,156,723	+				-1.2
1,156,723	+				-0.8
1,156,723	+				-0.3
1,156,723	+				-0.3
1,156,723	+				-0.5
1,156,723	+				-1.7
1,156,723	+				-0.1
1,156,723	+				+0.3
1,156,724	-				-0.7
1,156,724	-				-1.3
1,156,724	-				+0.1
1,156,724	-				+0.4
1,156,724	-				-0.9
1,156,727	+				+0.1
1,156,727	+				-0.4
1,156,727	+				-0.3
1,156,727	+				-1.1
1,156,727	+				-0.8
1,156,727	+				+1.3
1,156,727	+				+1.2
1,156,728	-				-0.8
1,156,728	-				+1.4
1,156,728	-				+2.0
1,156,728	-				-0.7
1,156,728	-				-0.8
1,156,728	-				-0.5
1,156,728	-				-0.9
1,156,786	+				-0.8
1,156,786	+				+0.3
1,156,786	+				+1.2
1,156,786	+				-0.3
1,156,786	+				+0.1
1,156,786	+				+0.3
1,156,786	+				-0.5
1,156,786	+				-2.9
1,156,786	+				+0.7
1,156,786	+				-0.4
1,156,786	+				-0.5
1,156,786	+				-0.1
1,156,786	+				+0.4
1,156,786	+				-0.8
1,156,786	+				+0.2
1,156,786	+				-0.6
1,156,786	+				+0.4
1,156,787	-				+0.6
1,156,787	-				+1.3
1,156,787	-				+0.7
1,156,787	-				-1.8
1,156,787	-				-0.5
1,156,787	-				+0.3
1,156,787	-				-0.1
1,156,787	-				-0.3
1,156,787	-				+0.5
1,156,787	-				+0.3
1,156,787	-				-0.5
1,156,787	-				-0.4
1,156,787	-				+0.6
1,156,804	+				+0.6
1,156,804	+				+0.0
1,156,805	-				+0.9
1,156,805	-				-2.8
1,156,805	-				+0.6
1,156,805	-				+0.2
1,156,805	-				-0.1
1,156,870	+				-0.4
1,156,870	+				+0.7
1,156,870	+				-1.4
1,156,871	-				+0.7
1,156,871	-				-0.9
1,156,871	-				-0.3
1,156,871	-				-1.8
1,156,871	-				-0.5
1,157,011	+		MPMX19_01122	0.24	-3.3
1,157,011	+		MPMX19_01122	0.24	+0.6
1,157,011	+		MPMX19_01122	0.24	-1.1
1,157,011	+		MPMX19_01122	0.24	+0.3
1,157,011	+		MPMX19_01122	0.24	+0.3
1,157,011	+		MPMX19_01122	0.24	-1.0
1,157,011	+		MPMX19_01122	0.24	+0.3
1,157,011	+		MPMX19_01122	0.24	+0.7
1,157,011	+		MPMX19_01122	0.24	+2.8
1,157,011	+		MPMX19_01122	0.24	+0.3
1,157,011	+		MPMX19_01122	0.24	+0.3
1,157,012	-		MPMX19_01122	0.24	-2.2
1,157,012	-		MPMX19_01122	0.24	-1.1
1,157,012	-		MPMX19_01122	0.24	+0.9
1,157,012	-		MPMX19_01122	0.24	+0.4
1,157,012	-		MPMX19_01122	0.24	+1.0
1,157,012	-		MPMX19_01122	0.24	+0.3
1,157,012	-		MPMX19_01122	0.24	-1.0
1,157,012	-		MPMX19_01122	0.24	-1.3
1,157,012	-		MPMX19_01122	0.24	+0.3
1,157,012	-		MPMX19_01122	0.24	-0.8
1,157,012	-		MPMX19_01122	0.24	+0.2
1,157,102	-		MPMX19_01122	0.34	+1.0
1,157,102	-		MPMX19_01122	0.34	+2.3
1,157,128	+		MPMX19_01122	0.36	-1.6
1,157,128	+		MPMX19_01122	0.36	+1.1
1,157,128	+		MPMX19_01122	0.36	+0.2
1,157,128	+		MPMX19_01122	0.36	+0.1
1,157,128	+		MPMX19_01122	0.36	-0.5
1,157,128	+		MPMX19_01122	0.36	+1.5
1,157,128	+		MPMX19_01122	0.36	-2.2
1,157,128	+		MPMX19_01122	0.36	-1.7
1,157,128	+		MPMX19_01122	0.36	-3.5
1,157,128	+		MPMX19_01122	0.36	+0.6
1,157,128	+		MPMX19_01122	0.36	-0.5
1,157,129	-		MPMX19_01122	0.37	+0.1
1,157,129	-		MPMX19_01122	0.37	-0.1
1,157,129	-		MPMX19_01122	0.37	+1.3
1,157,129	-		MPMX19_01122	0.37	-1.3
1,157,129	-		MPMX19_01122	0.37	+0.1
1,157,129	-		MPMX19_01122	0.37	-0.1
1,157,129	-		MPMX19_01122	0.37	-0.4
1,157,332	+		MPMX19_01122	0.58	-0.7
1,157,332	+		MPMX19_01122	0.58	-0.9
1,157,332	+		MPMX19_01122	0.58	+0.3
1,157,332	+		MPMX19_01122	0.58	+0.2
1,157,333	-		MPMX19_01122	0.58	-0.2
1,157,479	+		MPMX19_01122	0.74	+0.3
1,157,479	+		MPMX19_01122	0.74	-0.3
1,157,479	+		MPMX19_01122	0.74	+0.6
1,157,480	-		MPMX19_01122	0.74	-0.3
1,157,480	-		MPMX19_01122	0.74	-0.4
1,157,480	-		MPMX19_01122	0.74	+0.5
1,157,480	-		MPMX19_01122	0.74	-1.3
1,157,480	-		MPMX19_01122	0.74	-1.0