Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01061

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,098,831	+				+0.3
1,098,831	+				+1.1
1,098,831	+				-0.5
1,098,831	+				-1.0
1,098,831	+				-0.4
1,098,831	+				-0.1
1,098,831	+				-1.3
1,098,831	+				-0.8
1,098,831	+				+1.4
1,098,831	+				+1.2
1,098,831	+				+0.0
1,098,831	+				-3.5
1,098,831	+				-0.7
1,098,831	+				+0.5
1,098,832	-				+0.4
1,098,832	-				-1.1
1,098,832	-				-0.8
1,098,832	-				-1.8
1,098,832	-				-0.7
1,098,832	-				+2.2
1,098,832	-				-0.4
1,098,832	-				+0.5
1,098,832	-				+0.2
1,098,832	-				-0.2
1,098,832	-				-0.5
1,098,832	-				-1.6
1,098,832	-				-0.5
1,098,832	-				+0.5
1,098,832	-				+0.9
1,098,832	-				-0.7
1,098,852	+				-1.1
1,098,852	+				-0.3
1,098,852	+				+0.2
1,098,852	+				+0.7
1,098,852	+				-1.8
1,098,852	+				+1.2
1,098,852	+				-1.2
1,098,852	+				+0.0
1,098,852	+				-0.0
1,098,852	+				-0.5
1,098,852	+				-0.3
1,098,852	+				-0.3
1,098,853	-				+0.9
1,098,853	-				+0.5
1,098,853	-				+2.0
1,098,853	-				-1.1
1,098,853	-				+0.3
1,098,853	-				-1.7
1,098,853	-				+0.0
1,098,853	-				+1.2
1,098,853	-				-1.7
1,098,853	-				-0.2
1,098,853	-				-0.4
1,098,853	-				-2.4
1,098,936	-				-0.3
1,099,201	+		MPMX19_01060	0.37	+0.7
1,099,201	+		MPMX19_01060	0.37	-1.5
1,099,202	-		MPMX19_01060	0.38	+2.1
1,099,386	+		MPMX19_01060	0.59	+0.1
1,099,386	+		MPMX19_01060	0.59	-0.0
1,099,386	+		MPMX19_01060	0.59	-0.4
1,099,386	+		MPMX19_01060	0.59	+0.1
1,099,386	+		MPMX19_01060	0.59	-0.2
1,099,386	+		MPMX19_01060	0.59	-0.7
1,099,386	+		MPMX19_01060	0.59	+1.7
1,099,386	+		MPMX19_01060	0.59	-1.0
1,099,386	+		MPMX19_01060	0.59	-2.0
1,099,386	+		MPMX19_01060	0.59	+0.6
1,099,386	+		MPMX19_01060	0.59	+0.5
1,099,386	+		MPMX19_01060	0.59	+0.4
1,099,386	+		MPMX19_01060	0.59	-0.6
1,099,387	-		MPMX19_01060	0.60	+1.8
1,099,387	-		MPMX19_01060	0.60	+0.4
1,099,387	-		MPMX19_01060	0.60	-0.3
1,099,387	-		MPMX19_01060	0.60	+1.2
1,099,387	-		MPMX19_01060	0.60	-0.1
1,099,387	-		MPMX19_01060	0.60	+0.3
1,099,387	-		MPMX19_01060	0.60	-0.3
1,099,387	-		MPMX19_01060	0.60	-1.0
1,099,387	-		MPMX19_01060	0.60	+0.6
1,099,387	-		MPMX19_01060	0.60	+1.5
1,099,387	-		MPMX19_01060	0.60	-0.5
1,099,387	-		MPMX19_01060	0.60	-0.1
1,099,387	-		MPMX19_01060	0.60	+0.7
1,099,387	-		MPMX19_01060	0.60	+1.3
1,099,387	-		MPMX19_01060	0.60	+2.5
1,099,387	-		MPMX19_01060	0.60	-0.1
1,099,387	-		MPMX19_01060	0.60	+0.1
1,099,387	-		MPMX19_01060	0.60	-1.0
1,099,387	-		MPMX19_01060	0.60	-1.8
1,099,387	-		MPMX19_01060	0.60	-1.1
1,099,387	-		MPMX19_01060	0.60	-1.3
1,099,387	-		MPMX19_01060	0.60	+0.9
1,099,387	-		MPMX19_01060	0.60	+1.1
1,099,596	+		MPMX19_01060	0.84	-0.5
1,099,596	+		MPMX19_01060	0.84	-0.6
1,099,596	+		MPMX19_01060	0.84	-0.6
1,099,596	+		MPMX19_01060	0.84	-0.1
1,099,597	-		MPMX19_01060	0.84	-0.6
1,099,597	-		MPMX19_01060	0.84	-0.2
1,099,597	-		MPMX19_01060	0.84	+1.2
1,099,597	-		MPMX19_01060	0.84	-1.1
1,099,632	+		MPMX19_01060	0.89	-0.8
1,099,632	+		MPMX19_01060	0.89	-0.8
1,099,632	+		MPMX19_01060	0.89	-0.6
1,099,632	+		MPMX19_01060	0.89	+0.3
1,099,632	+		MPMX19_01060	0.89	-1.0
1,099,632	+		MPMX19_01060	0.89	+0.1
1,099,632	+		MPMX19_01060	0.89	+0.2
1,099,632	+		MPMX19_01060	0.89	-0.8
1,099,632	+		MPMX19_01060	0.89	-0.6
1,099,632	+		MPMX19_01060	0.89	-0.5
1,099,632	+		MPMX19_01060	0.89	-0.7
1,099,632	+		MPMX19_01060	0.89	+0.3
1,099,633	-		MPMX19_01060	0.89	+0.6
1,099,633	-		MPMX19_01060	0.89	+1.1
1,099,633	-		MPMX19_01060	0.89	-0.3
1,099,633	-		MPMX19_01060	0.89	-0.6
1,099,633	-		MPMX19_01060	0.89	+2.1
1,099,633	-		MPMX19_01060	0.89	+0.7
1,099,633	-		MPMX19_01060	0.89	+0.9
1,099,633	-		MPMX19_01060	0.89	-1.1
1,099,633	-		MPMX19_01060	0.89	-1.1
1,099,732	+				-1.1
1,099,732	+				+0.3
1,099,732	+				-0.3
1,099,732	+				+1.3
1,099,732	+				-1.5
1,099,732	+				-0.0
1,099,733	-				-1.8
1,099,733	-				+0.5
1,099,733	-				+0.5
1,099,733	-				-0.3
1,099,733	-				-0.1
1,099,745	+				-0.7
1,099,745	+				-0.7
1,099,745	+				-0.6
1,099,745	+				+1.0
1,099,745	+				+0.3
1,099,745	+				-0.5
1,099,746	-				-0.9
1,099,746	-				+0.9
1,099,746	-				+0.3
1,099,746	-				+0.8
1,099,746	-				-1.7
1,099,746	-				-1.2
1,099,797	+				-1.8
1,099,797	+				-1.1
1,099,797	+				-0.5
1,099,797	+				-1.1
1,099,797	+				-0.3
1,099,797	+				-0.1
1,099,797	+				+0.8
1,099,797	+				+0.5
1,099,797	+				+0.2
1,099,798	-				-0.1
1,099,798	-				-2.6
1,099,798	-				-0.0
1,099,798	-				+0.9
1,099,798	-				+0.4
1,099,798	-				+0.6
1,099,798	-				-0.7
1,099,798	-				+0.2
1,099,798	-				+1.1
1,099,798	-				-0.5
1,099,829	+				-0.7
1,099,829	+				-1.0
1,099,829	+				+0.7
1,099,829	+				+0.2
1,099,829	+				-0.4
1,099,830	-				+0.4
1,099,830	-				+1.2
1,099,830	-				-1.5
1,099,830	-				+0.3
1,099,830	-				+0.8
1,099,830	-				+0.8
1,099,830	-				-0.3
1,099,830	-				-1.0
1,099,923	+				-0.4
1,099,923	+				-2.2
1,099,924	-				+0.5
1,099,924	-				-0.4
1,100,424	+		MPMX19_01061	0.33	-2.0
1,100,424	+		MPMX19_01061	0.33	-1.7
1,100,424	+		MPMX19_01061	0.33	+0.1
1,100,424	+		MPMX19_01061	0.33	-0.8
1,100,424	+		MPMX19_01061	0.33	-0.8
1,100,425	-		MPMX19_01061	0.33	+0.6
1,100,561	+		MPMX19_01061	0.40	-0.1
1,100,562	-		MPMX19_01061	0.40	+0.2
1,100,592	+		MPMX19_01061	0.42	+1.2
1,100,592	+		MPMX19_01061	0.42	-0.0
1,100,592	+		MPMX19_01061	0.42	-0.4
1,100,593	-		MPMX19_01061	0.42	+0.0
1,101,168	+		MPMX19_01061	0.74	+0.3
1,101,168	+		MPMX19_01061	0.74	+0.3
1,101,168	+		MPMX19_01061	0.74	-1.0
1,101,168	+		MPMX19_01061	0.74	-3.4
1,101,168	+		MPMX19_01061	0.74	-0.5
1,101,169	-		MPMX19_01061	0.74	+0.5
1,101,169	-		MPMX19_01061	0.74	-0.1
1,101,169	-		MPMX19_01061	0.74	+0.5
1,101,169	-		MPMX19_01061	0.74	+1.0
1,101,169	-		MPMX19_01061	0.74	-0.7
1,101,169	-		MPMX19_01061	0.74	+0.3
1,101,169	-		MPMX19_01061	0.74	+2.2
1,101,169	-		MPMX19_01061	0.74	+0.4
1,101,169	-		MPMX19_01061	0.74	-0.5
1,101,169	-		MPMX19_01061	0.74	+0.5
1,101,171	+		MPMX19_01061	0.74	+1.2
1,101,171	+		MPMX19_01061	0.74	-0.3
1,101,171	+		MPMX19_01061	0.74	-0.5
1,101,171	+		MPMX19_01061	0.74	-1.1
1,101,172	-		MPMX19_01061	0.74	+0.9
1,101,172	-		MPMX19_01061	0.74	-1.0
1,101,172	-		MPMX19_01061	0.74	+0.9
1,101,172	-		MPMX19_01061	0.74	+0.5
1,101,792	+		MPMX19_01062	0.19	-0.1
1,101,792	+		MPMX19_01062	0.19	+1.8
1,101,792	+		MPMX19_01062	0.19	+0.2
1,101,792	+		MPMX19_01062	0.19	-0.3
1,101,793	-		MPMX19_01062	0.19	-0.1
1,101,793	-		MPMX19_01062	0.19	-1.6
1,101,793	-		MPMX19_01062	0.19	-0.7
1,101,793	-		MPMX19_01062	0.19	-0.5
1,101,793	-		MPMX19_01062	0.19	+0.7
1,101,793	-		MPMX19_01062	0.19	-0.0
1,101,793	-		MPMX19_01062	0.19	+0.2
1,101,793	-		MPMX19_01062	0.19	+1.2
1,102,583	+		MPMX19_01063	0.17	-0.3
1,102,583	+		MPMX19_01063	0.17	+0.2
1,102,584	-		MPMX19_01063	0.17	+0.7
1,102,584	-		MPMX19_01063	0.17	-1.1
1,102,584	-		MPMX19_01063	0.17	+0.6
1,102,584	-		MPMX19_01063	0.17	-0.1
1,102,584	-		MPMX19_01063	0.17	+0.1