Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00785 and MPMX19_00786 are separated by 234 nucleotides MPMX19_00786 and MPMX19_00787 are separated by 237 nucleotides
MPMX19_00785: MPMX19_00785 - hypothetical protein, at 803,980 to 806,463
_00785
MPMX19_00786: MPMX19_00786 - Adaptive-response sensory-kinase SasA, at 806,698 to 808,338
_00786
MPMX19_00787: MPMX19_00787 - Sensor histidine kinase RcsC, at 808,576 to 809,934
_00787
Position (kb) 806
807
808
809 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.993 kb on + strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 805.994 kb on - strand, within MPMX19_00785 at 806.317 kb on + strand at 806.516 kb on + strand at 806.516 kb on + strand at 806.517 kb on - strand at 806.517 kb on - strand at 806.549 kb on + strand at 806.550 kb on - strand at 806.597 kb on + strand at 806.597 kb on + strand at 806.597 kb on + strand at 806.598 kb on - strand at 806.651 kb on + strand at 806.651 kb on + strand at 806.652 kb on - strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.824 kb on + strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.825 kb on - strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.845 kb on + strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 806.846 kb on - strand at 807.016 kb on + strand, within MPMX19_00786 at 807.165 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.457 kb on + strand, within MPMX19_00786 at 807.673 kb on + strand, within MPMX19_00786 at 807.673 kb on + strand, within MPMX19_00786 at 807.673 kb on + strand, within MPMX19_00786 at 807.673 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.721 kb on + strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 807.722 kb on - strand, within MPMX19_00786 at 808.037 kb on - strand, within MPMX19_00786 at 808.052 kb on - strand, within MPMX19_00786 at 808.067 kb on + strand, within MPMX19_00786 at 808.067 kb on + strand, within MPMX19_00786 at 808.067 kb on + strand, within MPMX19_00786 at 808.067 kb on + strand, within MPMX19_00786 at 808.068 kb on - strand, within MPMX19_00786 at 808.068 kb on - strand, within MPMX19_00786 at 808.068 kb on - strand, within MPMX19_00786 at 808.096 kb on + strand, within MPMX19_00786 at 808.096 kb on + strand, within MPMX19_00786 at 808.096 kb on + strand, within MPMX19_00786 at 808.097 kb on - strand, within MPMX19_00786 at 808.097 kb on - strand, within MPMX19_00786 at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.414 kb on + strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.415 kb on - strand at 808.563 kb on + strand at 808.563 kb on + strand at 808.563 kb on + strand at 808.564 kb on - strand at 808.564 kb on - strand at 808.564 kb on - strand at 808.564 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 805,993 + MPMX19_00785 0.81 +0.5 805,993 + MPMX19_00785 0.81 -0.4 805,993 + MPMX19_00785 0.81 -1.1 805,993 + MPMX19_00785 0.81 -1.5 805,993 + MPMX19_00785 0.81 +0.0 805,994 - MPMX19_00785 0.81 +0.1 805,994 - MPMX19_00785 0.81 -0.0 805,994 - MPMX19_00785 0.81 +0.2 806,317 + -0.2 806,516 + -0.8 806,516 + +0.3 806,517 - +0.2 806,517 - -1.0 806,549 + -0.7 806,550 - +0.5 806,597 + -3.0 806,597 + -0.7 806,597 + -1.8 806,598 - -0.7 806,651 + -1.2 806,651 + +0.2 806,652 - +1.0 806,824 + +0.8 806,824 + -0.8 806,824 + +0.9 806,824 + +0.7 806,824 + -0.4 806,824 + -0.1 806,824 + -0.2 806,825 - +0.3 806,825 - -0.6 806,825 - +1.3 806,825 - +0.4 806,825 - -0.9 806,825 - -1.7 806,825 - +0.2 806,825 - -0.8 806,825 - +0.1 806,825 - -0.2 806,825 - -0.1 806,825 - +0.2 806,825 - +0.8 806,825 - +0.3 806,845 + -0.3 806,845 + +0.5 806,845 + -0.1 806,845 + -1.3 806,845 + +0.0 806,845 + -0.7 806,845 + -0.9 806,845 + -0.8 806,845 + -0.1 806,845 + -1.0 806,845 + +0.6 806,845 + +0.0 806,845 + -1.4 806,845 + -0.7 806,845 + -1.5 806,846 - +0.0 806,846 - -0.0 806,846 - -0.5 806,846 - +1.1 806,846 - -0.1 806,846 - -1.2 806,846 - +0.5 806,846 - +0.3 806,846 - -0.1 806,846 - -0.5 807,016 + MPMX19_00786 0.19 +0.8 807,165 + MPMX19_00786 0.28 +0.6 807,457 + MPMX19_00786 0.46 -2.0 807,457 + MPMX19_00786 0.46 -1.1 807,457 + MPMX19_00786 0.46 +1.5 807,457 + MPMX19_00786 0.46 -0.1 807,457 + MPMX19_00786 0.46 -1.1 807,457 + MPMX19_00786 0.46 -0.1 807,673 + MPMX19_00786 0.59 +1.2 807,673 + MPMX19_00786 0.59 -0.2 807,673 + MPMX19_00786 0.59 -0.2 807,673 + MPMX19_00786 0.59 -1.1 807,721 + MPMX19_00786 0.62 +0.4 807,721 + MPMX19_00786 0.62 -0.9 807,721 + MPMX19_00786 0.62 -1.1 807,721 + MPMX19_00786 0.62 -0.6 807,721 + MPMX19_00786 0.62 +0.5 807,721 + MPMX19_00786 0.62 -1.0 807,721 + MPMX19_00786 0.62 -0.8 807,721 + MPMX19_00786 0.62 +0.0 807,721 + MPMX19_00786 0.62 +0.5 807,721 + MPMX19_00786 0.62 -1.3 807,721 + MPMX19_00786 0.62 +0.6 807,721 + MPMX19_00786 0.62 -1.3 807,721 + MPMX19_00786 0.62 -0.4 807,721 + MPMX19_00786 0.62 +0.3 807,721 + MPMX19_00786 0.62 -1.7 807,721 + MPMX19_00786 0.62 +0.2 807,721 + MPMX19_00786 0.62 -1.7 807,721 + MPMX19_00786 0.62 +0.4 807,722 - MPMX19_00786 0.62 -1.0 807,722 - MPMX19_00786 0.62 -1.0 807,722 - MPMX19_00786 0.62 +0.9 807,722 - MPMX19_00786 0.62 +0.8 807,722 - MPMX19_00786 0.62 +1.5 807,722 - MPMX19_00786 0.62 -0.2 807,722 - MPMX19_00786 0.62 +0.5 807,722 - MPMX19_00786 0.62 -0.4 807,722 - MPMX19_00786 0.62 +0.6 807,722 - MPMX19_00786 0.62 +0.5 807,722 - MPMX19_00786 0.62 -1.8 807,722 - MPMX19_00786 0.62 -0.7 807,722 - MPMX19_00786 0.62 -0.9 807,722 - MPMX19_00786 0.62 +2.1 807,722 - MPMX19_00786 0.62 +0.0 807,722 - MPMX19_00786 0.62 -0.1 807,722 - MPMX19_00786 0.62 +0.1 807,722 - MPMX19_00786 0.62 +2.5 807,722 - MPMX19_00786 0.62 -0.8 807,722 - MPMX19_00786 0.62 -2.2 807,722 - MPMX19_00786 0.62 -0.6 808,037 - MPMX19_00786 0.82 -0.7 808,052 - MPMX19_00786 0.83 -1.1 808,067 + MPMX19_00786 0.83 -1.1 808,067 + MPMX19_00786 0.83 -0.5 808,067 + MPMX19_00786 0.83 -1.7 808,067 + MPMX19_00786 0.83 +0.9 808,068 - MPMX19_00786 0.83 -1.0 808,068 - MPMX19_00786 0.83 +0.2 808,068 - MPMX19_00786 0.83 +0.8 808,096 + MPMX19_00786 0.85 -0.3 808,096 + MPMX19_00786 0.85 -0.7 808,096 + MPMX19_00786 0.85 -1.4 808,097 - MPMX19_00786 0.85 -0.3 808,097 - MPMX19_00786 0.85 -0.5 808,414 + -0.3 808,414 + +1.2 808,414 + +0.3 808,414 + -1.6 808,414 + +0.5 808,414 + +0.0 808,414 + +0.3 808,414 + -1.0 808,414 + +1.2 808,414 + -0.9 808,414 + -0.8 808,414 + -0.5 808,414 + -1.4 808,415 - -0.4 808,415 - +0.2 808,415 - -0.2 808,415 - -1.8 808,415 - -0.7 808,415 - +0.2 808,415 - -1.3 808,415 - -0.3 808,563 + +0.2 808,563 + +0.0 808,563 + -1.1 808,564 - +0.3 808,564 - -1.2 808,564 - -0.5 808,564 - -1.1
Or see this region's nucleotide sequence