Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00729 and MPMX19_00730 are separated by 244 nucleotides MPMX19_00730 and MPMX19_00731 are separated by 91 nucleotides
MPMX19_00729: MPMX19_00729 - K(+)-insensitive pyrophosphate-energized proton pump, at 750,386 to 752,488
_00729
MPMX19_00730: MPMX19_00730 - hypothetical protein, at 752,733 to 753,191
_00730
MPMX19_00731: MPMX19_00731 - Thiamine-monophosphate kinase, at 753,283 to 754,275
_00731
Position (kb) 752
753
754 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 751.776 kb on + strand, within MPMX19_00729 at 751.776 kb on + strand, within MPMX19_00729 at 751.776 kb on + strand, within MPMX19_00729 at 751.777 kb on - strand, within MPMX19_00729 at 751.777 kb on - strand, within MPMX19_00729 at 751.777 kb on - strand, within MPMX19_00729 at 751.777 kb on - strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.037 kb on + strand, within MPMX19_00729 at 752.038 kb on - strand, within MPMX19_00729 at 752.038 kb on - strand, within MPMX19_00729 at 752.038 kb on - strand, within MPMX19_00729 at 752.038 kb on - strand, within MPMX19_00729 at 752.061 kb on + strand, within MPMX19_00729 at 752.061 kb on + strand, within MPMX19_00729 at 752.061 kb on + strand, within MPMX19_00729 at 752.061 kb on + strand, within MPMX19_00729 at 752.062 kb on - strand, within MPMX19_00729 at 752.062 kb on - strand, within MPMX19_00729 at 752.062 kb on - strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.211 kb on + strand, within MPMX19_00729 at 752.212 kb on - strand, within MPMX19_00729 at 752.212 kb on - strand, within MPMX19_00729 at 752.212 kb on - strand, within MPMX19_00729 at 752.212 kb on - strand, within MPMX19_00729 at 752.212 kb on - strand, within MPMX19_00729 at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.325 kb on + strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.326 kb on - strand at 752.340 kb on + strand at 752.340 kb on + strand at 752.341 kb on - strand at 752.425 kb on + strand at 752.437 kb on - strand at 752.437 kb on - strand at 752.437 kb on - strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.480 kb on + strand at 752.481 kb on - strand at 752.481 kb on - strand at 752.508 kb on + strand at 752.508 kb on + strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.509 kb on - strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.573 kb on + strand at 752.574 kb on - strand at 752.656 kb on + strand at 752.669 kb on + strand at 752.675 kb on + strand at 752.675 kb on + strand at 752.686 kb on + strand at 752.686 kb on + strand at 752.686 kb on + strand at 752.773 kb on + strand at 752.773 kb on + strand at 752.773 kb on + strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.774 kb on - strand at 752.837 kb on + strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.838 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 752.885 kb on - strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.106 kb on + strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.107 kb on - strand, within MPMX19_00730 at 753.115 kb on + strand, within MPMX19_00730 at 753.115 kb on + strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.116 kb on - strand, within MPMX19_00730 at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.204 kb on + strand at 753.205 kb on - strand at 753.205 kb on - strand at 753.256 kb on + strand at 753.256 kb on + strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand at 753.257 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 751,776 + MPMX19_00729 0.66 +0.5 751,776 + MPMX19_00729 0.66 +0.5 751,776 + MPMX19_00729 0.66 -0.6 751,777 - MPMX19_00729 0.66 -0.8 751,777 - MPMX19_00729 0.66 +2.1 751,777 - MPMX19_00729 0.66 -1.9 751,777 - MPMX19_00729 0.66 -0.8 752,037 + MPMX19_00729 0.79 +0.1 752,037 + MPMX19_00729 0.79 -2.3 752,037 + MPMX19_00729 0.79 +0.6 752,037 + MPMX19_00729 0.79 -0.5 752,037 + MPMX19_00729 0.79 -0.6 752,037 + MPMX19_00729 0.79 -1.0 752,037 + MPMX19_00729 0.79 -0.7 752,038 - MPMX19_00729 0.79 +1.5 752,038 - MPMX19_00729 0.79 -2.4 752,038 - MPMX19_00729 0.79 -1.5 752,038 - MPMX19_00729 0.79 -2.9 752,061 + MPMX19_00729 0.80 -2.1 752,061 + MPMX19_00729 0.80 -0.7 752,061 + MPMX19_00729 0.80 +0.8 752,061 + MPMX19_00729 0.80 -0.2 752,062 - MPMX19_00729 0.80 -1.5 752,062 - MPMX19_00729 0.80 -0.5 752,062 - MPMX19_00729 0.80 -2.1 752,211 + MPMX19_00729 0.87 -0.8 752,211 + MPMX19_00729 0.87 +0.3 752,211 + MPMX19_00729 0.87 -0.8 752,211 + MPMX19_00729 0.87 +1.8 752,211 + MPMX19_00729 0.87 +1.3 752,211 + MPMX19_00729 0.87 +1.6 752,211 + MPMX19_00729 0.87 -0.5 752,212 - MPMX19_00729 0.87 +1.5 752,212 - MPMX19_00729 0.87 +0.3 752,212 - MPMX19_00729 0.87 -1.0 752,212 - MPMX19_00729 0.87 -0.3 752,212 - MPMX19_00729 0.87 -0.1 752,325 + +0.1 752,325 + +0.2 752,325 + +0.4 752,325 + +0.3 752,325 + -1.5 752,325 + -0.9 752,325 + +0.3 752,325 + -0.1 752,325 + -0.1 752,325 + +1.2 752,325 + +0.7 752,325 + -0.8 752,325 + -0.8 752,325 + +0.1 752,325 + -0.3 752,325 + -1.5 752,325 + +1.0 752,325 + +0.2 752,325 + +1.1 752,325 + -0.3 752,325 + -0.4 752,326 - -1.0 752,326 - +0.8 752,326 - -0.9 752,326 - -0.7 752,326 - +0.5 752,326 - +0.4 752,326 - -0.1 752,326 - -0.1 752,326 - -1.3 752,326 - -0.5 752,326 - -1.1 752,326 - -0.4 752,326 - -1.1 752,326 - +0.4 752,326 - -0.3 752,340 + +0.5 752,340 + -0.1 752,341 - +0.4 752,425 + -0.3 752,437 - -0.5 752,437 - -0.8 752,437 - +0.5 752,480 + +0.2 752,480 + +0.1 752,480 + -0.1 752,480 + -0.3 752,481 - +0.8 752,481 - +0.6 752,508 + -0.1 752,508 + -0.5 752,509 - -0.1 752,509 - -0.6 752,509 - -1.7 752,509 - -0.4 752,509 - +0.1 752,573 + +0.5 752,573 + +0.1 752,573 + +1.5 752,573 + -0.4 752,573 + +1.3 752,574 - +0.4 752,656 + -0.6 752,669 + +0.9 752,675 + -0.8 752,675 + -1.2 752,686 + -0.5 752,686 + -1.5 752,686 + -1.3 752,773 + +0.5 752,773 + -0.3 752,773 + -1.4 752,774 - +0.5 752,774 - +0.6 752,774 - +0.0 752,774 - -0.3 752,774 - -1.1 752,774 - -0.6 752,837 + MPMX19_00730 0.23 -0.9 752,838 - MPMX19_00730 0.23 +0.1 752,838 - MPMX19_00730 0.23 +0.5 752,838 - MPMX19_00730 0.23 -0.5 752,838 - MPMX19_00730 0.23 +0.1 752,838 - MPMX19_00730 0.23 -0.1 752,838 - MPMX19_00730 0.23 -1.8 752,838 - MPMX19_00730 0.23 -0.3 752,885 - MPMX19_00730 0.33 +0.7 752,885 - MPMX19_00730 0.33 -1.5 752,885 - MPMX19_00730 0.33 -0.8 753,106 + MPMX19_00730 0.81 +0.9 753,106 + MPMX19_00730 0.81 -0.5 753,106 + MPMX19_00730 0.81 +1.0 753,106 + MPMX19_00730 0.81 +0.2 753,106 + MPMX19_00730 0.81 +0.1 753,106 + MPMX19_00730 0.81 -0.0 753,107 - MPMX19_00730 0.81 +0.9 753,107 - MPMX19_00730 0.81 +0.7 753,107 - MPMX19_00730 0.81 +0.6 753,107 - MPMX19_00730 0.81 +0.5 753,107 - MPMX19_00730 0.81 -0.2 753,107 - MPMX19_00730 0.81 +0.2 753,115 + MPMX19_00730 0.83 +0.3 753,115 + MPMX19_00730 0.83 +0.1 753,116 - MPMX19_00730 0.83 -0.2 753,116 - MPMX19_00730 0.83 -0.7 753,116 - MPMX19_00730 0.83 -0.8 753,204 + +0.2 753,204 + -1.3 753,204 + -0.3 753,204 + -0.1 753,204 + -0.7 753,204 + -1.0 753,205 - -1.6 753,205 - +1.7 753,256 + -0.7 753,256 + -0.8 753,257 - -1.5 753,257 - -0.2 753,257 - -1.1 753,257 - -0.5 753,257 - +0.2 753,257 - -0.5
Or see this region's nucleotide sequence