Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00125 and MPMX19_00126 are separated by 299 nucleotides MPMX19_00126 and MPMX19_00127 overlap by 4 nucleotides MPMX19_00127 and MPMX19_00128 are separated by 1 nucleotides
MPMX19_00125: MPMX19_00125 - hypothetical protein, at 136,790 to 137,851
_00125
MPMX19_00126: MPMX19_00126 - hypothetical protein, at 138,151 to 138,471
_00126
MPMX19_00127: MPMX19_00127 - hypothetical protein, at 138,468 to 138,650
_00127
MPMX19_00128: MPMX19_00128 - hypothetical protein, at 138,652 to 139,101
_00128
Position (kb) 138
139
140 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 137.796 kb on + strand at 137.796 kb on + strand at 137.796 kb on + strand at 137.796 kb on + strand at 137.797 kb on - strand at 137.797 kb on - strand at 137.797 kb on - strand at 137.797 kb on - strand at 137.797 kb on - strand at 137.944 kb on + strand at 137.944 kb on + strand at 137.944 kb on + strand at 137.944 kb on + strand at 137.944 kb on + strand at 137.944 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.044 kb on + strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.045 kb on - strand at 138.083 kb on + strand at 138.083 kb on + strand at 138.084 kb on - strand at 138.084 kb on - strand at 138.084 kb on - strand at 138.084 kb on - strand at 138.084 kb on - strand at 138.230 kb on + strand, within MPMX19_00126 at 138.230 kb on + strand, within MPMX19_00126 at 138.230 kb on + strand, within MPMX19_00126 at 138.230 kb on + strand, within MPMX19_00126 at 138.231 kb on - strand, within MPMX19_00126 at 138.285 kb on - strand, within MPMX19_00126 at 138.308 kb on + strand, within MPMX19_00126 at 138.308 kb on + strand, within MPMX19_00126 at 138.308 kb on + strand, within MPMX19_00126 at 138.309 kb on - strand, within MPMX19_00126 at 138.511 kb on + strand, within MPMX19_00127 at 138.511 kb on + strand, within MPMX19_00127 at 138.741 kb on - strand, within MPMX19_00128 at 138.741 kb on - strand, within MPMX19_00128 at 138.741 kb on - strand, within MPMX19_00128 at 138.741 kb on - strand, within MPMX19_00128 at 138.741 kb on - strand, within MPMX19_00128 at 138.741 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.895 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.908 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 138.939 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.046 kb on - strand, within MPMX19_00128 at 139.650 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.675 kb on - strand at 139.879 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 137,796 + +0.9 137,796 + +0.8 137,796 + -0.2 137,796 + +0.1 137,797 - -0.0 137,797 - -0.5 137,797 - -2.6 137,797 - +0.6 137,797 - -0.4 137,944 + -0.4 137,944 + +0.6 137,944 + -0.2 137,944 + -1.4 137,944 + -0.1 137,944 + +0.3 138,044 + -0.9 138,044 + -1.7 138,044 + +0.5 138,044 + -2.8 138,044 + -1.4 138,044 + +1.0 138,044 + +0.5 138,044 + -1.8 138,044 + -0.2 138,044 + -2.0 138,044 + -1.3 138,044 + -2.0 138,044 + -1.3 138,044 + -2.4 138,044 + -1.5 138,044 + +0.6 138,044 + -1.8 138,044 + +0.2 138,044 + +0.5 138,044 + -0.1 138,044 + -0.9 138,045 - -1.4 138,045 - -0.6 138,045 - -1.6 138,045 - -2.0 138,045 - -1.4 138,045 - -0.5 138,045 - -0.9 138,045 - +0.1 138,045 - -1.0 138,045 - -0.1 138,045 - +0.2 138,045 - -0.9 138,045 - -1.1 138,045 - -1.2 138,045 - +0.4 138,045 - +2.2 138,045 - -0.7 138,045 - -1.2 138,045 - -0.4 138,045 - +0.5 138,045 - -1.8 138,045 - -0.1 138,045 - -0.5 138,045 - -0.9 138,045 - -0.7 138,045 - -2.7 138,045 - -0.8 138,045 - -0.7 138,045 - -1.7 138,045 - -2.1 138,045 - -2.1 138,045 - -2.6 138,045 - -0.2 138,083 + -0.6 138,083 + -1.2 138,084 - -0.3 138,084 - -0.9 138,084 - -0.7 138,084 - +1.1 138,084 - -1.4 138,230 + MPMX19_00126 0.25 -0.7 138,230 + MPMX19_00126 0.25 -2.4 138,230 + MPMX19_00126 0.25 +0.1 138,230 + MPMX19_00126 0.25 -0.8 138,231 - MPMX19_00126 0.25 -0.2 138,285 - MPMX19_00126 0.42 -0.9 138,308 + MPMX19_00126 0.49 -0.4 138,308 + MPMX19_00126 0.49 -2.5 138,308 + MPMX19_00126 0.49 -0.5 138,309 - MPMX19_00126 0.49 -0.9 138,511 + MPMX19_00127 0.23 -0.4 138,511 + MPMX19_00127 0.23 -0.7 138,741 - MPMX19_00128 0.20 -0.6 138,741 - MPMX19_00128 0.20 -1.7 138,741 - MPMX19_00128 0.20 -0.4 138,741 - MPMX19_00128 0.20 -1.4 138,741 - MPMX19_00128 0.20 -0.3 138,741 - MPMX19_00128 0.20 -0.9 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -1.7 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -0.5 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -2.5 138,895 - MPMX19_00128 0.54 -0.5 138,895 - MPMX19_00128 0.54 -2.7 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -2.8 138,895 - MPMX19_00128 0.54 -1.7 138,895 - MPMX19_00128 0.54 -0.2 138,895 - MPMX19_00128 0.54 -1.6 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -1.9 138,895 - MPMX19_00128 0.54 -2.4 138,895 - MPMX19_00128 0.54 +0.6 138,895 - MPMX19_00128 0.54 +0.5 138,895 - MPMX19_00128 0.54 -1.4 138,895 - MPMX19_00128 0.54 -0.4 138,895 - MPMX19_00128 0.54 -0.1 138,895 - MPMX19_00128 0.54 -3.5 138,895 - MPMX19_00128 0.54 -0.9 138,895 - MPMX19_00128 0.54 -0.0 138,895 - MPMX19_00128 0.54 -0.4 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -0.2 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -0.9 138,895 - MPMX19_00128 0.54 -1.7 138,895 - MPMX19_00128 0.54 -1.1 138,895 - MPMX19_00128 0.54 -1.4 138,895 - MPMX19_00128 0.54 -0.4 138,895 - MPMX19_00128 0.54 -2.3 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -3.4 138,895 - MPMX19_00128 0.54 -2.9 138,895 - MPMX19_00128 0.54 -2.7 138,895 - MPMX19_00128 0.54 -0.8 138,895 - MPMX19_00128 0.54 -2.6 138,895 - MPMX19_00128 0.54 -3.1 138,895 - MPMX19_00128 0.54 -1.0 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -1.5 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -0.2 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -1.2 138,895 - MPMX19_00128 0.54 -0.9 138,895 - MPMX19_00128 0.54 -1.0 138,895 - MPMX19_00128 0.54 -2.0 138,895 - MPMX19_00128 0.54 -1.0 138,895 - MPMX19_00128 0.54 -2.3 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -2.1 138,895 - MPMX19_00128 0.54 -0.8 138,895 - MPMX19_00128 0.54 -1.4 138,895 - MPMX19_00128 0.54 +1.6 138,895 - MPMX19_00128 0.54 -2.0 138,895 - MPMX19_00128 0.54 -2.5 138,895 - MPMX19_00128 0.54 -0.7 138,895 - MPMX19_00128 0.54 -1.5 138,895 - MPMX19_00128 0.54 -1.5 138,895 - MPMX19_00128 0.54 -1.1 138,895 - MPMX19_00128 0.54 -0.7 138,908 - MPMX19_00128 0.57 -1.4 138,908 - MPMX19_00128 0.57 -2.7 138,908 - MPMX19_00128 0.57 -1.2 138,908 - MPMX19_00128 0.57 -1.5 138,908 - MPMX19_00128 0.57 -1.6 138,908 - MPMX19_00128 0.57 +0.1 138,908 - MPMX19_00128 0.57 +0.1 138,908 - MPMX19_00128 0.57 -1.5 138,908 - MPMX19_00128 0.57 -2.7 138,908 - MPMX19_00128 0.57 -2.9 138,908 - MPMX19_00128 0.57 -0.7 138,908 - MPMX19_00128 0.57 -3.1 138,939 - MPMX19_00128 0.64 -0.5 138,939 - MPMX19_00128 0.64 -3.4 138,939 - MPMX19_00128 0.64 -2.6 138,939 - MPMX19_00128 0.64 -1.0 138,939 - MPMX19_00128 0.64 -1.4 138,939 - MPMX19_00128 0.64 -0.9 138,939 - MPMX19_00128 0.64 -2.9 138,939 - MPMX19_00128 0.64 -2.9 138,939 - MPMX19_00128 0.64 -0.9 138,939 - MPMX19_00128 0.64 -2.7 138,939 - MPMX19_00128 0.64 -0.4 138,939 - MPMX19_00128 0.64 +1.6 138,939 - MPMX19_00128 0.64 -0.4 138,939 - MPMX19_00128 0.64 -0.7 138,939 - MPMX19_00128 0.64 -2.6 138,939 - MPMX19_00128 0.64 -2.8 138,939 - MPMX19_00128 0.64 -1.7 138,939 - MPMX19_00128 0.64 +2.1 138,939 - MPMX19_00128 0.64 -2.3 138,939 - MPMX19_00128 0.64 -0.9 138,939 - MPMX19_00128 0.64 -4.1 138,939 - MPMX19_00128 0.64 -1.2 138,939 - MPMX19_00128 0.64 -2.3 139,046 - MPMX19_00128 0.88 -0.4 139,046 - MPMX19_00128 0.88 -0.7 139,046 - MPMX19_00128 0.88 -2.4 139,046 - MPMX19_00128 0.88 -0.7 139,046 - MPMX19_00128 0.88 -3.1 139,046 - MPMX19_00128 0.88 -1.9 139,650 - +0.2 139,675 - +0.5 139,675 - -1.9 139,675 - +0.1 139,879 + +0.3
Or see this region's nucleotide sequence