Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00100

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
106,160	+		MPMX19_00098	0.69	-0.2
106,160	+		MPMX19_00098	0.69	-0.9
106,160	+		MPMX19_00098	0.69	-0.5
106,160	+		MPMX19_00098	0.69	+0.3
106,160	+		MPMX19_00098	0.69	+0.2
106,160	+		MPMX19_00098	0.69	+0.8
106,160	+		MPMX19_00098	0.69	-1.4
106,160	+		MPMX19_00098	0.69	+0.1
106,161	-		MPMX19_00098	0.69	+0.9
106,161	-		MPMX19_00098	0.69	+1.1
106,161	-		MPMX19_00098	0.69	-0.4
106,161	-		MPMX19_00098	0.69	+0.4
106,161	-		MPMX19_00098	0.69	+0.6
106,161	-		MPMX19_00098	0.69	+1.1
106,181	+		MPMX19_00098	0.71	+0.2
106,181	+		MPMX19_00098	0.71	-0.6
106,181	+		MPMX19_00098	0.71	+0.6
106,181	+		MPMX19_00098	0.71	-0.7
106,182	-		MPMX19_00098	0.71	-0.4
106,182	-		MPMX19_00098	0.71	-0.1
106,182	-		MPMX19_00098	0.71	-1.1
106,182	-		MPMX19_00098	0.71	-0.4
106,440	-				+0.8
106,440	-				-1.4
106,440	-				-0.4
106,514	+				+1.1
106,514	+				-0.2
106,515	-				+0.1
106,515	-				+0.3
106,559	+				-0.2
106,559	+				+0.9
106,559	+				+0.5
106,560	-				+1.4
106,560	-				+0.2
106,560	-				-0.8
106,560	-				-0.0
106,560	-				+0.1
106,560	-				-0.1
106,560	-				-0.3
106,687	+		MPMX19_00099	0.27	-0.4
106,688	-		MPMX19_00099	0.27	-0.4
106,688	-		MPMX19_00099	0.27	+0.5
107,025	-				-0.2
107,075	+				-2.6
107,075	+				-0.4
107,076	-				-1.2
107,076	-				+0.9
107,076	-				+0.1
107,103	+				-0.1
107,103	+				+0.1
107,103	+				-0.4
107,103	+				-1.6
107,104	-				-2.3
107,232	+		MPMX19_00100	0.37	+0.3
107,232	+		MPMX19_00100	0.37	-1.4
107,232	+		MPMX19_00100	0.37	-1.8
107,233	-		MPMX19_00100	0.37	+0.4
107,310	+		MPMX19_00100	0.68	-2.4
107,310	+		MPMX19_00100	0.68	+0.3
107,310	+		MPMX19_00100	0.68	-1.3
107,310	+		MPMX19_00100	0.68	-1.2
107,310	+		MPMX19_00100	0.68	-0.2
107,310	+		MPMX19_00100	0.68	-0.1
107,310	+		MPMX19_00100	0.68	-0.8
107,311	-		MPMX19_00100	0.69	-1.4
107,311	-		MPMX19_00100	0.69	-0.2
107,311	-		MPMX19_00100	0.69	-0.9
107,311	-		MPMX19_00100	0.69	-0.8
107,311	-		MPMX19_00100	0.69	+1.2
107,311	-		MPMX19_00100	0.69	+0.5
107,607	+				-2.4
107,607	+				+0.2
107,712	+		MPMX19_00101	0.12	-0.1
107,712	+		MPMX19_00101	0.12	-2.5
107,712	+		MPMX19_00101	0.12	-0.8
107,712	+		MPMX19_00101	0.12	-1.7
107,712	+		MPMX19_00101	0.12	-0.4
107,712	+		MPMX19_00101	0.12	-0.1
107,712	+		MPMX19_00101	0.12	+1.0
107,712	+		MPMX19_00101	0.12	+0.1
107,712	+		MPMX19_00101	0.12	+0.5
107,713	-		MPMX19_00101	0.12	-0.8
107,713	-		MPMX19_00101	0.12	+0.6
107,713	-		MPMX19_00101	0.12	-1.1
107,713	-		MPMX19_00101	0.12	+0.1
107,928	+		MPMX19_00101	0.29	+1.1
107,928	+		MPMX19_00101	0.29	+1.1
107,928	+		MPMX19_00101	0.29	-0.2
107,928	+		MPMX19_00101	0.29	+0.1
107,928	+		MPMX19_00101	0.29	-0.6
107,928	+		MPMX19_00101	0.29	+0.4
107,929	-		MPMX19_00101	0.29	-0.1
107,929	-		MPMX19_00101	0.29	-0.7
107,929	-		MPMX19_00101	0.29	-1.5
107,929	-		MPMX19_00101	0.29	+1.2
107,929	-		MPMX19_00101	0.29	+0.2
107,929	-		MPMX19_00101	0.29	+0.3
108,007	-		MPMX19_00101	0.36	-0.8
108,007	-		MPMX19_00101	0.36	-2.4
108,007	-		MPMX19_00101	0.36	-0.4
108,007	-		MPMX19_00101	0.36	+0.9
108,007	-		MPMX19_00101	0.36	-0.3
108,007	-		MPMX19_00101	0.36	+0.4
108,007	-		MPMX19_00101	0.36	+0.5
108,007	-		MPMX19_00101	0.36	+0.1
108,007	-		MPMX19_00101	0.36	+1.3
108,007	-		MPMX19_00101	0.36	+0.8
108,007	-		MPMX19_00101	0.36	+0.7
108,007	-		MPMX19_00101	0.36	-1.4
108,007	-		MPMX19_00101	0.36	+1.6
108,007	-		MPMX19_00101	0.36	-0.5
108,007	-		MPMX19_00101	0.36	+0.2
108,007	-		MPMX19_00101	0.36	+0.2
108,007	-		MPMX19_00101	0.36	-0.7
108,007	-		MPMX19_00101	0.36	-0.4
108,007	-		MPMX19_00101	0.36	+1.3
108,007	-		MPMX19_00101	0.36	-0.3
108,007	-		MPMX19_00101	0.36	+0.8
108,007	-		MPMX19_00101	0.36	+0.8
108,007	-		MPMX19_00101	0.36	-0.1
108,013	-		MPMX19_00101	0.36	-0.3
108,013	-		MPMX19_00101	0.36	-0.1
108,013	-		MPMX19_00101	0.36	+0.3
108,013	-		MPMX19_00101	0.36	+1.2
108,013	-		MPMX19_00101	0.36	-0.1
108,013	-		MPMX19_00101	0.36	+0.9
108,013	-		MPMX19_00101	0.36	-0.3
108,013	-		MPMX19_00101	0.36	-0.7
108,013	-		MPMX19_00101	0.36	-2.4
108,013	-		MPMX19_00101	0.36	-0.2
108,123	+		MPMX19_00101	0.45	-0.0
108,132	+		MPMX19_00101	0.46	+1.4
108,133	-		MPMX19_00101	0.46	-0.8
108,133	-		MPMX19_00101	0.46	+0.1
108,133	-		MPMX19_00101	0.46	+0.2
108,145	-		MPMX19_00101	0.47	+0.2