Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00049

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
50,602	-				-0.2
50,602	-				-0.2
50,602	-				-0.0
50,602	-				-0.4
50,823	+		MPMX19_00048	0.19	+0.0
50,823	+		MPMX19_00048	0.19	-0.1
50,823	+		MPMX19_00048	0.19	-0.8
50,824	-		MPMX19_00048	0.19	-0.9
50,824	-		MPMX19_00048	0.19	-0.3
50,883	+		MPMX19_00048	0.25	-0.4
50,883	+		MPMX19_00048	0.25	-1.0
50,883	+		MPMX19_00048	0.25	-0.2
50,883	+		MPMX19_00048	0.25	-1.3
50,883	+		MPMX19_00048	0.25	-0.5
50,883	+		MPMX19_00048	0.25	+1.0
50,883	+		MPMX19_00048	0.25	+0.5
50,883	+		MPMX19_00048	0.25	-0.9
50,883	+		MPMX19_00048	0.25	-0.7
50,883	+		MPMX19_00048	0.25	-0.5
50,883	+		MPMX19_00048	0.25	-0.5
50,884	-		MPMX19_00048	0.25	-0.5
50,884	-		MPMX19_00048	0.25	-0.2
50,884	-		MPMX19_00048	0.25	-0.9
50,884	-		MPMX19_00048	0.25	-0.1
50,884	-		MPMX19_00048	0.25	-0.2
50,884	-		MPMX19_00048	0.25	-0.6
50,884	-		MPMX19_00048	0.25	-1.3
50,884	-		MPMX19_00048	0.25	-0.8
50,884	-		MPMX19_00048	0.25	-1.8
50,884	-		MPMX19_00048	0.25	+0.2
50,884	-		MPMX19_00048	0.25	-0.3
50,884	-		MPMX19_00048	0.25	-0.7
50,884	-		MPMX19_00048	0.25	+0.2
51,339	+		MPMX19_00048	0.72	-0.3
51,340	-		MPMX19_00048	0.73	+1.8
51,340	-		MPMX19_00048	0.73	+0.2
51,546	+				-1.1
51,546	+				+0.6
51,546	+				-0.5
51,546	+				-0.4
51,546	+				-0.0
51,546	+				-0.6
51,546	+				+1.6
51,546	+				-1.1
51,546	+				+0.8
51,546	+				+0.1
51,546	+				+0.1
51,546	+				-0.2
51,546	+				-1.2
51,546	+				-0.6
51,546	+				+0.6
51,546	+				-1.4
51,546	+				+1.0
51,547	-				-1.4
51,547	-				-0.7
51,547	-				-0.5
51,547	-				+0.1
51,547	-				-1.0
51,547	-				-0.8
51,547	-				-1.4
51,547	-				+0.8
51,547	-				-0.2
51,547	-				-0.2
51,547	-				+0.4
51,547	-				-0.4
51,547	-				+0.1
51,902	+		MPMX19_00049	0.53	+0.5
51,902	+		MPMX19_00049	0.53	+0.1
51,902	+		MPMX19_00049	0.53	+0.4
51,902	+		MPMX19_00049	0.53	+0.1
51,903	-		MPMX19_00049	0.53	-0.7
51,903	-		MPMX19_00049	0.53	-0.6
51,903	-		MPMX19_00049	0.53	+0.3
51,968	+		MPMX19_00049	0.65	+0.3
51,968	+		MPMX19_00049	0.65	+2.6
51,968	+		MPMX19_00049	0.65	-0.9
51,968	+		MPMX19_00049	0.65	-0.9
51,969	-		MPMX19_00049	0.65	+0.9
51,969	-		MPMX19_00049	0.65	+1.1
51,969	-		MPMX19_00049	0.65	-0.5
51,969	-		MPMX19_00049	0.65	+1.2
51,969	-		MPMX19_00049	0.65	+0.4
51,969	-		MPMX19_00049	0.65	-0.8
51,969	-		MPMX19_00049	0.65	+0.4
52,194	+				-0.1
52,194	+				+0.4
52,194	+				+1.4
52,194	+				+0.2
52,194	+				-2.1
52,194	+				+0.6
52,195	-				+0.2
52,195	-				+0.8
52,195	-				-0.4
52,195	-				-0.4
52,275	+		MPMX19_00050	0.12	+2.1
52,789	+		MPMX19_00050	0.88	-1.4
52,789	+		MPMX19_00050	0.88	-2.7
52,789	+		MPMX19_00050	0.88	-0.4
52,789	+		MPMX19_00050	0.88	-2.3
52,789	+		MPMX19_00050	0.88	-0.2
52,789	+		MPMX19_00050	0.88	-0.8
52,790	-		MPMX19_00050	0.88	-0.3
52,790	-		MPMX19_00050	0.88	+0.2
52,790	-		MPMX19_00050	0.88	-0.5
52,790	-		MPMX19_00050	0.88	-1.9
52,790	-		MPMX19_00050	0.88	-0.5
52,790	-		MPMX19_00050	0.88	-0.8
52,876	+				-0.1
52,876	+				-0.2
52,876	+				-1.1
52,877	-				+0.1
52,877	-				-1.0
52,877	-				+0.2
52,877	-				-0.2
52,877	-				+1.1
52,877	-				-1.4
52,906	+				+0.1
52,907	-				-0.1
52,907	-				+0.1
52,907	-				-1.4
52,907	-				-0.8
52,966	+				-1.0
52,966	+				-0.2
52,966	+				-1.4
52,966	+				+0.1
52,966	+				-1.4
52,966	+				-1.1
52,966	+				-0.3
52,966	+				+0.5
52,966	+				-1.2
52,966	+				-1.6
52,967	-				-2.1
52,967	-				-0.4
52,967	-				+1.6
52,967	-				-0.5
52,967	-				-0.7
52,967	-				-1.4
52,967	-				-0.9
52,967	-				-0.4
52,967	-				+0.1
52,967	-				-2.3
52,967	-				-2.1
52,967	-				-0.7