Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF965 and GFF966 overlap by 4 nucleotides GFF966 and GFF967 are separated by 84 nucleotides
GFF965 - HTH-type transcriptional activator RhaR, at 299,916 to 300,935
GFF965
GFF966 - HTH-type transcriptional regulator HdfR, at 300,932 to 301,876
GFF966
GFF967 - hypothetical protein, at 301,961 to 302,824
GFF967
Position (kb) 300
301
302 Strain fitness (log2 ratio) -2
-1
0
1 at 300.158 kb on + strand, within GFF965 at 300.158 kb on + strand, within GFF965 at 300.159 kb on - strand, within GFF965 at 300.159 kb on - strand, within GFF965 at 300.334 kb on + strand, within GFF965 at 300.496 kb on + strand, within GFF965 at 300.497 kb on - strand, within GFF965 at 300.610 kb on + strand, within GFF965 at 300.611 kb on - strand, within GFF965 at 300.664 kb on + strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 300.665 kb on - strand, within GFF965 at 301.624 kb on - strand, within GFF966 at 301.940 kb on + strand at 301.940 kb on + strand at 301.941 kb on - strand at 301.944 kb on + strand at 301.944 kb on + strand at 301.944 kb on + strand at 301.945 kb on - strand at 301.945 kb on - strand at 301.945 kb on - strand at 301.945 kb on - strand at 301.945 kb on - strand at 302.227 kb on + strand, within GFF967 at 302.228 kb on - strand, within GFF967 at 302.228 kb on - strand, within GFF967 at 302.303 kb on + strand, within GFF967 at 302.303 kb on + strand, within GFF967 at 302.303 kb on + strand, within GFF967 at 302.304 kb on - strand, within GFF967 at 302.304 kb on - strand, within GFF967 at 302.304 kb on - strand, within GFF967 at 302.304 kb on - strand, within GFF967 at 302.563 kb on + strand, within GFF967 at 302.563 kb on + strand, within GFF967 at 302.563 kb on + strand, within GFF967 at 302.564 kb on - strand, within GFF967 at 302.564 kb on - strand, within GFF967 at 302.564 kb on - strand, within GFF967 at 302.664 kb on + strand, within GFF967 at 302.664 kb on + strand, within GFF967 at 302.664 kb on + strand, within GFF967 at 302.664 kb on + strand, within GFF967 at 302.665 kb on - strand, within GFF967 at 302.665 kb on - strand, within GFF967 at 302.665 kb on - strand, within GFF967 at 302.665 kb on - strand, within GFF967 at 302.665 kb on - strand, within GFF967 at 302.716 kb on - strand, within GFF967 at 302.782 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 300,158 + GFF965 0.24 +0.4 300,158 + GFF965 0.24 -0.2 300,159 - GFF965 0.24 -0.3 300,159 - GFF965 0.24 -0.8 300,334 + GFF965 0.41 +0.0 300,496 + GFF965 0.57 +0.1 300,497 - GFF965 0.57 -0.2 300,610 + GFF965 0.68 +0.8 300,611 - GFF965 0.68 -0.5 300,664 + GFF965 0.73 +0.6 300,665 - GFF965 0.73 +1.5 300,665 - GFF965 0.73 -0.4 300,665 - GFF965 0.73 -1.4 301,624 - GFF966 0.73 -1.6 301,940 + +0.2 301,940 + -0.0 301,941 - -0.1 301,944 + -0.4 301,944 + -1.1 301,944 + +1.2 301,945 - -0.5 301,945 - -0.0 301,945 - -0.4 301,945 - -1.8 301,945 - +0.5 302,227 + GFF967 0.31 -1.4 302,228 - GFF967 0.31 -0.9 302,228 - GFF967 0.31 -0.7 302,303 + GFF967 0.40 -0.9 302,303 + GFF967 0.40 +0.1 302,303 + GFF967 0.40 -0.1 302,304 - GFF967 0.40 -0.2 302,304 - GFF967 0.40 +0.8 302,304 - GFF967 0.40 +0.8 302,304 - GFF967 0.40 -1.0 302,563 + GFF967 0.70 -0.9 302,563 + GFF967 0.70 -1.2 302,563 + GFF967 0.70 -0.1 302,564 - GFF967 0.70 +0.3 302,564 - GFF967 0.70 -1.8 302,564 - GFF967 0.70 +0.9 302,664 + GFF967 0.81 +0.3 302,664 + GFF967 0.81 -0.7 302,664 + GFF967 0.81 -0.0 302,664 + GFF967 0.81 +1.0 302,665 - GFF967 0.81 -0.3 302,665 - GFF967 0.81 -0.1 302,665 - GFF967 0.81 -0.8 302,665 - GFF967 0.81 +0.8 302,665 - GFF967 0.81 -0.2 302,716 - GFF967 0.87 +0.1 302,782 + +0.2
Or see this region's nucleotide sequence