Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF939 and GFF940 are separated by 69 nucleotides GFF940 and GFF941 are separated by 43 nucleotides GFF941 and GFF942 are separated by 108 nucleotides
GFF939 - N-substituted formamide deformylase, at 270,416 to 272,254
GFF939
GFF940 - putative hydrolase YcaC, at 272,324 to 272,947
GFF940
GFF941 - hypothetical protein, at 272,991 to 274,418
GFF941
GFF942 - Acetyl esterase, at 274,527 to 275,549
GFF942
Position (kb) 272
273
274
275 Strain fitness (log2 ratio) -2
-1
0
1
2 at 272.336 kb on + strand at 272.337 kb on - strand at 272.679 kb on + strand, within GFF940 at 272.904 kb on - strand at 272.925 kb on - strand at 272.925 kb on - strand at 272.925 kb on - strand at 272.925 kb on - strand at 272.945 kb on + strand at 272.945 kb on + strand at 272.945 kb on + strand at 272.945 kb on + strand at 272.946 kb on - strand at 272.946 kb on - strand at 272.983 kb on + strand at 272.983 kb on + strand at 272.984 kb on - strand at 272.984 kb on - strand at 272.984 kb on - strand at 273.161 kb on - strand, within GFF941 at 273.161 kb on - strand, within GFF941 at 273.161 kb on - strand, within GFF941 at 273.598 kb on + strand, within GFF941 at 273.734 kb on + strand, within GFF941 at 273.864 kb on - strand, within GFF941 at 273.864 kb on - strand, within GFF941 at 273.883 kb on - strand, within GFF941 at 273.917 kb on - strand, within GFF941 at 274.046 kb on - strand, within GFF941 at 274.174 kb on + strand, within GFF941 at 274.174 kb on + strand, within GFF941 at 274.174 kb on + strand, within GFF941 at 274.174 kb on + strand, within GFF941 at 274.174 kb on + strand, within GFF941 at 274.175 kb on - strand, within GFF941 at 274.175 kb on - strand, within GFF941 at 274.406 kb on - strand at 274.486 kb on - strand at 274.486 kb on - strand at 274.529 kb on - strand at 274.640 kb on - strand, within GFF942 at 274.687 kb on + strand, within GFF942 at 274.822 kb on + strand, within GFF942 at 274.822 kb on + strand, within GFF942 at 274.822 kb on + strand, within GFF942 at 274.822 kb on + strand, within GFF942 at 274.822 kb on + strand, within GFF942 at 274.823 kb on - strand, within GFF942 at 274.823 kb on - strand, within GFF942 at 274.823 kb on - strand, within GFF942 at 274.823 kb on - strand, within GFF942 at 274.823 kb on - strand, within GFF942 at 275.084 kb on - strand, within GFF942 at 275.140 kb on + strand, within GFF942 at 275.140 kb on + strand, within GFF942 at 275.141 kb on - strand, within GFF942 at 275.141 kb on - strand, within GFF942 at 275.141 kb on - strand, within GFF942
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 272,336 + -0.8 272,337 - +0.1 272,679 + GFF940 0.57 -0.1 272,904 - +2.5 272,925 - -0.1 272,925 - +0.8 272,925 - +0.3 272,925 - -0.8 272,945 + +0.1 272,945 + -0.3 272,945 + +0.8 272,945 + -0.2 272,946 - -0.1 272,946 - -0.9 272,983 + -0.0 272,983 + -0.2 272,984 - -0.4 272,984 - -0.8 272,984 - -1.2 273,161 - GFF941 0.12 -0.2 273,161 - GFF941 0.12 +2.2 273,161 - GFF941 0.12 +0.2 273,598 + GFF941 0.43 +0.3 273,734 + GFF941 0.52 +0.4 273,864 - GFF941 0.61 -0.2 273,864 - GFF941 0.61 -2.7 273,883 - GFF941 0.62 -2.6 273,917 - GFF941 0.65 +0.6 274,046 - GFF941 0.74 -0.8 274,174 + GFF941 0.83 +1.5 274,174 + GFF941 0.83 +0.3 274,174 + GFF941 0.83 -0.3 274,174 + GFF941 0.83 +0.6 274,174 + GFF941 0.83 +0.7 274,175 - GFF941 0.83 +1.9 274,175 - GFF941 0.83 -0.5 274,406 - +0.1 274,486 - -0.2 274,486 - -0.5 274,529 - -0.3 274,640 - GFF942 0.11 +0.4 274,687 + GFF942 0.16 +0.8 274,822 + GFF942 0.29 +2.3 274,822 + GFF942 0.29 +0.8 274,822 + GFF942 0.29 -0.4 274,822 + GFF942 0.29 +0.7 274,822 + GFF942 0.29 +1.2 274,823 - GFF942 0.29 +0.2 274,823 - GFF942 0.29 -0.3 274,823 - GFF942 0.29 +0.7 274,823 - GFF942 0.29 +0.9 274,823 - GFF942 0.29 +0.8 275,084 - GFF942 0.54 +0.3 275,140 + GFF942 0.60 +0.4 275,140 + GFF942 0.60 -0.0 275,141 - GFF942 0.60 -1.0 275,141 - GFF942 0.60 -0.4 275,141 - GFF942 0.60 +0.5
Or see this region's nucleotide sequence