Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF833 and GFF834 are separated by 107 nucleotides GFF834 and GFF835 are separated by 79 nucleotides GFF835 and GFF836 are separated by 70 nucleotides GFF836 and GFF837 are separated by 1 nucleotides
GFF833 - hypothetical protein, at 184,081 to 184,947
GFF833
GFF834 - hypothetical protein, at 185,055 to 185,261
GFF834
GFF835 - hypothetical protein, at 185,341 to 185,766
GFF835
GFF836 - hypothetical protein, at 185,837 to 186,640
GFF836
GFF837 - hypothetical protein, at 186,642 to 187,613
GFF837
Position (kb) 185
186 Strain fitness (log2 ratio) -2
-1
0
1 at 185.459 kb on - strand, within GFF835 at 185.459 kb on - strand, within GFF835 at 185.721 kb on - strand, within GFF835 at 185.721 kb on - strand, within GFF835 at 185.721 kb on - strand, within GFF835 at 185.792 kb on - strand at 185.818 kb on - strand at 185.818 kb on - strand at 185.836 kb on + strand at 185.836 kb on + strand at 185.836 kb on + strand at 185.837 kb on - strand at 185.864 kb on - strand at 186.007 kb on - strand, within GFF836 at 186.007 kb on - strand, within GFF836 at 186.007 kb on - strand, within GFF836 at 186.013 kb on - strand, within GFF836 at 186.013 kb on - strand, within GFF836 at 186.032 kb on + strand, within GFF836 at 186.032 kb on + strand, within GFF836 at 186.032 kb on + strand, within GFF836 at 186.032 kb on + strand, within GFF836 at 186.032 kb on + strand, within GFF836 at 186.033 kb on - strand, within GFF836 at 186.033 kb on - strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.065 kb on + strand, within GFF836 at 186.066 kb on - strand, within GFF836 at 186.085 kb on + strand, within GFF836 at 186.086 kb on - strand, within GFF836 at 186.086 kb on - strand, within GFF836 at 186.108 kb on - strand, within GFF836 at 186.118 kb on + strand, within GFF836 at 186.118 kb on + strand, within GFF836 at 186.118 kb on + strand, within GFF836 at 186.119 kb on - strand, within GFF836 at 186.235 kb on + strand, within GFF836 at 186.539 kb on + strand, within GFF836 at 186.540 kb on - strand, within GFF836 at 186.593 kb on + strand at 186.593 kb on + strand at 186.594 kb on - strand at 186.594 kb on - strand at 186.641 kb on + strand at 186.641 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 185,459 - GFF835 0.28 +0.2 185,459 - GFF835 0.28 +1.1 185,721 - GFF835 0.89 -1.3 185,721 - GFF835 0.89 +0.9 185,721 - GFF835 0.89 +0.4 185,792 - +0.5 185,818 - +1.1 185,818 - +0.8 185,836 + -0.9 185,836 + +0.9 185,836 + +0.6 185,837 - -0.4 185,864 - +0.5 186,007 - GFF836 0.21 -0.5 186,007 - GFF836 0.21 +0.1 186,007 - GFF836 0.21 +0.2 186,013 - GFF836 0.22 -0.7 186,013 - GFF836 0.22 -0.2 186,032 + GFF836 0.24 +1.2 186,032 + GFF836 0.24 -0.2 186,032 + GFF836 0.24 -0.1 186,032 + GFF836 0.24 -1.9 186,032 + GFF836 0.24 +0.0 186,033 - GFF836 0.24 -1.1 186,033 - GFF836 0.24 +1.0 186,065 + GFF836 0.28 +0.8 186,065 + GFF836 0.28 +0.6 186,065 + GFF836 0.28 -0.9 186,065 + GFF836 0.28 -0.1 186,065 + GFF836 0.28 -0.9 186,065 + GFF836 0.28 -0.1 186,065 + GFF836 0.28 -0.0 186,065 + GFF836 0.28 +0.8 186,066 - GFF836 0.28 +0.3 186,085 + GFF836 0.31 +0.2 186,086 - GFF836 0.31 -0.9 186,086 - GFF836 0.31 +0.7 186,108 - GFF836 0.34 +0.1 186,118 + GFF836 0.35 -1.5 186,118 + GFF836 0.35 -0.1 186,118 + GFF836 0.35 +0.8 186,119 - GFF836 0.35 +0.9 186,235 + GFF836 0.50 -0.4 186,539 + GFF836 0.87 +0.4 186,540 - GFF836 0.87 -0.2 186,593 + -1.6 186,593 + -1.6 186,594 - -0.5 186,594 - -0.3 186,641 + -0.7 186,641 + -0.7
Or see this region's nucleotide sequence