Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF811 and GFF812 are separated by 6 nucleotides GFF812 and GFF813 are separated by 108 nucleotides GFF813 and GFF814 are separated by 3 nucleotides GFF814 and GFF815 are separated by 91 nucleotides
GFF811 - hypothetical protein, at 172,327 to 172,989
GFF811
GFF812 - hypothetical protein, at 172,996 to 173,583
GFF812
GFF813 - hypothetical protein, at 173,692 to 174,372
GFF813
GFF814 - hypothetical protein, at 174,376 to 175,245
GFF814
GFF815 - hypothetical protein, at 175,337 to 175,525
GFF815
Position (kb) 173
174
175 Strain fitness (log2 ratio) -1
0
1 at 172.764 kb on + strand, within GFF811 at 172.767 kb on + strand, within GFF811 at 172.980 kb on - strand at 172.983 kb on + strand at 172.983 kb on + strand at 172.984 kb on - strand at 172.988 kb on - strand at 172.993 kb on + strand at 172.993 kb on + strand at 172.994 kb on - strand at 172.997 kb on + strand at 172.997 kb on + strand at 173.015 kb on + strand at 173.016 kb on - strand at 173.044 kb on + strand at 173.111 kb on - strand, within GFF812 at 173.129 kb on + strand, within GFF812 at 173.130 kb on - strand, within GFF812 at 173.130 kb on - strand, within GFF812 at 173.130 kb on - strand, within GFF812 at 173.245 kb on + strand, within GFF812 at 173.246 kb on - strand, within GFF812 at 173.288 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.456 kb on + strand, within GFF812 at 173.457 kb on - strand, within GFF812 at 173.457 kb on - strand, within GFF812 at 173.457 kb on - strand, within GFF812 at 173.533 kb on - strand at 173.533 kb on - strand at 173.548 kb on + strand at 173.548 kb on + strand at 173.549 kb on - strand at 173.549 kb on - strand at 173.634 kb on - strand at 173.634 kb on - strand at 173.637 kb on + strand at 173.638 kb on - strand at 173.638 kb on - strand at 173.638 kb on - strand at 173.774 kb on - strand, within GFF813 at 173.885 kb on + strand, within GFF813 at 174.322 kb on + strand at 174.323 kb on - strand at 174.365 kb on + strand at 174.413 kb on + strand at 174.414 kb on - strand at 174.414 kb on - strand at 174.474 kb on - strand, within GFF814 at 174.804 kb on - strand, within GFF814 at 174.804 kb on - strand, within GFF814 at 174.804 kb on - strand, within GFF814 at 174.804 kb on - strand, within GFF814 at 174.808 kb on + strand, within GFF814 at 174.926 kb on + strand, within GFF814 at 174.926 kb on + strand, within GFF814 at 174.927 kb on - strand, within GFF814 at 174.927 kb on - strand, within GFF814 at 174.927 kb on - strand, within GFF814 at 175.172 kb on + strand at 175.173 kb on - strand at 175.173 kb on - strand at 175.173 kb on - strand at 175.245 kb on + strand at 175.245 kb on + strand at 175.290 kb on + strand at 175.290 kb on + strand at 175.301 kb on + strand at 175.302 kb on - strand at 175.302 kb on - strand at 175.305 kb on + strand at 175.305 kb on + strand at 175.305 kb on + strand at 175.306 kb on - strand at 175.306 kb on - strand at 175.306 kb on - strand at 175.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 172,764 + GFF811 0.66 -0.2 172,767 + GFF811 0.66 +0.5 172,980 - +0.7 172,983 + -0.1 172,983 + +0.5 172,984 - -1.3 172,988 - -1.1 172,993 + -0.3 172,993 + -0.6 172,994 - -1.0 172,997 + +0.4 172,997 + -0.2 173,015 + +0.2 173,016 - -0.0 173,044 + +1.2 173,111 - GFF812 0.20 +0.8 173,129 + GFF812 0.23 +0.8 173,130 - GFF812 0.23 -0.7 173,130 - GFF812 0.23 +0.0 173,130 - GFF812 0.23 +0.1 173,245 + GFF812 0.42 +0.1 173,246 - GFF812 0.43 -0.0 173,288 + GFF812 0.50 +0.2 173,456 + GFF812 0.78 +0.5 173,456 + GFF812 0.78 +0.3 173,456 + GFF812 0.78 -0.2 173,456 + GFF812 0.78 -0.3 173,456 + GFF812 0.78 +0.7 173,456 + GFF812 0.78 +0.1 173,456 + GFF812 0.78 +0.0 173,456 + GFF812 0.78 -0.2 173,456 + GFF812 0.78 -0.8 173,456 + GFF812 0.78 +0.1 173,456 + GFF812 0.78 -1.1 173,456 + GFF812 0.78 +0.3 173,457 - GFF812 0.78 +0.7 173,457 - GFF812 0.78 -0.2 173,457 - GFF812 0.78 +1.7 173,533 - +0.9 173,533 - -0.4 173,548 + -0.1 173,548 + +0.1 173,549 - -0.3 173,549 - -0.5 173,634 - -0.1 173,634 - +1.0 173,637 + -1.5 173,638 - -0.3 173,638 - -0.4 173,638 - -0.3 173,774 - GFF813 0.12 +1.1 173,885 + GFF813 0.28 +0.2 174,322 + -1.2 174,323 - -0.2 174,365 + +0.2 174,413 + -0.8 174,414 - -0.5 174,414 - -0.5 174,474 - GFF814 0.11 +1.0 174,804 - GFF814 0.49 +0.3 174,804 - GFF814 0.49 +0.0 174,804 - GFF814 0.49 +0.4 174,804 - GFF814 0.49 -0.6 174,808 + GFF814 0.50 +0.3 174,926 + GFF814 0.63 -1.0 174,926 + GFF814 0.63 -0.2 174,927 - GFF814 0.63 -0.8 174,927 - GFF814 0.63 -0.8 174,927 - GFF814 0.63 +0.5 175,172 + +0.0 175,173 - +0.5 175,173 - -0.1 175,173 - +0.2 175,245 + -0.0 175,245 + -0.1 175,290 + -0.1 175,290 + -0.6 175,301 + +0.2 175,302 - +1.4 175,302 - -0.3 175,305 + -0.1 175,305 + +0.2 175,305 + -0.5 175,306 - +0.5 175,306 - +1.0 175,306 - +0.3 175,306 - -0.3
Or see this region's nucleotide sequence