Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF671 and GFF672 are separated by 172 nucleotides GFF672 and GFF673 are separated by 129 nucleotides GFF673 and GFF674 are separated by 166 nucleotides GFF674 and GFF675 overlap by 28 nucleotides
GFF671 - hypothetical protein, at 742,365 to 743,366
GFF671
GFF672 - hypothetical protein, at 743,539 to 743,763
GFF672
GFF673 - Dodecin, at 743,893 to 744,108
GFF673
GFF674 - putative protein YqjD, at 744,275 to 744,601
GFF674
GFF675 - HTH-type transcriptional regulator TrpI, at 744,574 to 745,491
GFF675
Position (kb) 744
745 Strain fitness (log2 ratio) -1
0
1
2 at 743.307 kb on + strand at 743.307 kb on + strand at 743.308 kb on - strand at 743.308 kb on - strand at 743.308 kb on - strand at 743.334 kb on + strand at 743.335 kb on - strand at 743.335 kb on - strand at 743.364 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.380 kb on + strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.381 kb on - strand at 743.430 kb on + strand at 743.430 kb on + strand at 743.430 kb on + strand at 743.430 kb on + strand at 743.431 kb on - strand at 743.431 kb on - strand at 743.525 kb on + strand at 743.525 kb on + strand at 743.552 kb on + strand at 743.553 kb on - strand at 743.740 kb on + strand, within GFF672 at 743.741 kb on - strand at 743.741 kb on - strand at 743.832 kb on - strand at 743.832 kb on - strand at 743.832 kb on - strand at 743.883 kb on + strand at 743.883 kb on + strand at 743.884 kb on - strand at 743.884 kb on - strand at 743.944 kb on + strand, within GFF673 at 744.058 kb on - strand, within GFF673 at 744.089 kb on + strand at 744.090 kb on - strand at 744.149 kb on + strand at 744.149 kb on + strand at 744.149 kb on + strand at 744.150 kb on - strand at 744.291 kb on + strand at 744.291 kb on + strand at 744.291 kb on + strand at 744.292 kb on - strand at 744.292 kb on - strand at 744.292 kb on - strand at 744.292 kb on - strand at 744.292 kb on - strand at 744.292 kb on - strand at 744.295 kb on + strand at 744.295 kb on + strand at 744.458 kb on + strand, within GFF674 at 744.458 kb on + strand, within GFF674 at 744.458 kb on + strand, within GFF674 at 744.809 kb on + strand, within GFF675 at 744.809 kb on + strand, within GFF675 at 744.809 kb on + strand, within GFF675 at 744.809 kb on + strand, within GFF675 at 744.810 kb on - strand, within GFF675 at 744.810 kb on - strand, within GFF675 at 744.810 kb on - strand, within GFF675 at 744.810 kb on - strand, within GFF675 at 744.810 kb on - strand, within GFF675 at 744.812 kb on + strand, within GFF675 at 744.813 kb on - strand, within GFF675 at 744.969 kb on + strand, within GFF675 at 744.969 kb on + strand, within GFF675 at 744.970 kb on - strand, within GFF675 at 744.971 kb on + strand, within GFF675 at 744.971 kb on + strand, within GFF675 at 744.971 kb on + strand, within GFF675 at 744.971 kb on + strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.972 kb on - strand, within GFF675 at 744.985 kb on + strand, within GFF675 at 745.016 kb on + strand, within GFF675 at 745.016 kb on + strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.017 kb on - strand, within GFF675 at 745.348 kb on + strand, within GFF675 at 745.349 kb on - strand, within GFF675 at 745.349 kb on - strand, within GFF675 at 745.349 kb on - strand, within GFF675 at 745.349 kb on - strand, within GFF675 at 745.558 kb on + strand at 745.559 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 743,307 + -0.5 743,307 + -1.2 743,308 - -0.2 743,308 - -0.3 743,308 - +0.2 743,334 + +0.4 743,335 - +0.3 743,335 - -0.9 743,364 + +0.1 743,380 + -0.1 743,380 + +1.0 743,380 + -0.4 743,380 + +2.0 743,380 + +0.4 743,380 + +0.4 743,380 + +0.6 743,380 + -0.1 743,380 + -0.2 743,380 + -1.2 743,380 + -0.0 743,380 + +1.2 743,380 + +0.6 743,380 + +0.5 743,381 - -0.7 743,381 - +1.0 743,381 - -0.4 743,381 - +0.2 743,381 - -0.2 743,381 - -0.2 743,381 - -0.0 743,381 - +0.9 743,381 - -1.1 743,381 - -1.5 743,381 - +1.1 743,381 - +0.2 743,430 + -0.0 743,430 + +1.1 743,430 + +0.6 743,430 + +0.5 743,431 - +0.2 743,431 - -0.1 743,525 + +0.6 743,525 + -0.6 743,552 + +1.2 743,553 - -0.1 743,740 + GFF672 0.89 -0.6 743,741 - +0.9 743,741 - +0.6 743,832 - +0.2 743,832 - +1.0 743,832 - -0.4 743,883 + -0.1 743,883 + +0.3 743,884 - -0.2 743,884 - +0.7 743,944 + GFF673 0.24 +0.4 744,058 - GFF673 0.76 -1.4 744,089 + +0.3 744,090 - -0.7 744,149 + +0.4 744,149 + +0.7 744,149 + -0.1 744,150 - -1.1 744,291 + -0.1 744,291 + +1.0 744,291 + +0.2 744,292 - +0.1 744,292 - +0.6 744,292 - +0.3 744,292 - +1.4 744,292 - -0.5 744,292 - -0.5 744,295 + +0.8 744,295 + +0.5 744,458 + GFF674 0.56 +0.1 744,458 + GFF674 0.56 -0.6 744,458 + GFF674 0.56 -1.0 744,809 + GFF675 0.26 +0.7 744,809 + GFF675 0.26 -1.2 744,809 + GFF675 0.26 -0.9 744,809 + GFF675 0.26 -0.4 744,810 - GFF675 0.26 +0.2 744,810 - GFF675 0.26 +0.3 744,810 - GFF675 0.26 -0.4 744,810 - GFF675 0.26 -0.1 744,810 - GFF675 0.26 -0.7 744,812 + GFF675 0.26 +1.0 744,813 - GFF675 0.26 -0.3 744,969 + GFF675 0.43 -0.0 744,969 + GFF675 0.43 -1.0 744,970 - GFF675 0.43 +1.5 744,971 + GFF675 0.43 -1.4 744,971 + GFF675 0.43 +0.8 744,971 + GFF675 0.43 -0.9 744,971 + GFF675 0.43 -1.1 744,972 - GFF675 0.43 -0.8 744,972 - GFF675 0.43 -0.0 744,972 - GFF675 0.43 +1.3 744,972 - GFF675 0.43 +0.1 744,972 - GFF675 0.43 -0.0 744,972 - GFF675 0.43 -0.0 744,972 - GFF675 0.43 -0.3 744,985 + GFF675 0.45 -1.0 745,016 + GFF675 0.48 +0.5 745,016 + GFF675 0.48 -1.4 745,017 - GFF675 0.48 -0.8 745,017 - GFF675 0.48 -0.9 745,017 - GFF675 0.48 +0.4 745,017 - GFF675 0.48 +0.9 745,017 - GFF675 0.48 +0.1 745,017 - GFF675 0.48 +0.2 745,348 + GFF675 0.84 +0.5 745,349 - GFF675 0.84 -0.8 745,349 - GFF675 0.84 -0.0 745,349 - GFF675 0.84 -0.4 745,349 - GFF675 0.84 +0.0 745,558 + -0.1 745,559 - -1.5
Or see this region's nucleotide sequence