Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4988 and GFF4989 are separated by 159 nucleotides GFF4989 and GFF4990 are separated by 4 nucleotides GFF4990 and GFF4991 are separated by 143 nucleotides GFF4991 and GFF4992 are separated by 204 nucleotides
GFF4988 - Translation initiation factor IF-2, at 95,455 to 97,983
GFF4988
GFF4989 - 30S ribosome-binding factor, at 98,143 to 98,544
GFF4989
GFF4990 - tRNA pseudouridine synthase B, at 98,549 to 99,466
GFF4990
GFF4991 - 30S ribosomal protein S15, at 99,610 to 99,879
GFF4991
GFF4992 - Polyribonucleotide nucleotidyltransferase, at 100,084 to 102,189
GFF4992
Position (kb) 98
99
100 Strain fitness (log2 ratio) -2
-1
0
1 at 98.048 kb on + strand at 98.134 kb on + strand at 98.543 kb on - strand at 98.543 kb on - strand at 98.543 kb on - strand at 98.575 kb on + strand at 98.750 kb on + strand, within GFF4990 at 98.982 kb on + strand, within GFF4990 at 98.983 kb on - strand, within GFF4990 at 99.010 kb on + strand, within GFF4990 at 99.010 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.083 kb on + strand, within GFF4990 at 99.085 kb on + strand, within GFF4990 at 99.134 kb on + strand, within GFF4990 at 99.134 kb on + strand, within GFF4990 at 99.134 kb on + strand, within GFF4990 at 99.134 kb on + strand, within GFF4990 at 99.317 kb on + strand, within GFF4990 at 99.317 kb on + strand, within GFF4990 at 99.965 kb on - strand at 99.965 kb on - strand at 99.981 kb on + strand at 99.982 kb on - strand at 99.982 kb on - strand at 99.982 kb on - strand at 99.987 kb on + strand at 99.987 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 98,048 + -1.2 98,134 + +0.8 98,543 - -1.0 98,543 - -1.9 98,543 - -0.5 98,575 + +0.0 98,750 + GFF4990 0.22 +1.3 98,982 + GFF4990 0.47 -1.0 98,983 - GFF4990 0.47 -0.2 99,010 + GFF4990 0.50 -0.6 99,010 + GFF4990 0.50 -0.9 99,083 + GFF4990 0.58 -1.0 99,083 + GFF4990 0.58 +0.0 99,083 + GFF4990 0.58 -0.4 99,083 + GFF4990 0.58 -0.4 99,083 + GFF4990 0.58 -0.7 99,083 + GFF4990 0.58 -1.4 99,085 + GFF4990 0.58 -0.3 99,134 + GFF4990 0.64 -0.4 99,134 + GFF4990 0.64 -0.9 99,134 + GFF4990 0.64 +0.8 99,134 + GFF4990 0.64 -1.6 99,317 + GFF4990 0.84 +1.3 99,317 + GFF4990 0.84 +0.6 99,965 - +1.6 99,965 - +0.3 99,981 + +0.5 99,982 - -0.2 99,982 - -0.3 99,982 - -0.1 99,987 + -1.1 99,987 + -0.5
Or see this region's nucleotide sequence