Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4597 and GFF4598 are separated by 32 nucleotides GFF4598 and GFF4599 overlap by 22 nucleotides GFF4599 and GFF4600 are separated by 103 nucleotides GFF4600 and GFF4601 are separated by 117 nucleotides
GFF4597 - Protease HtpX, at 84,963 to 85,850
GFF4597
GFF4598 - hypothetical protein, at 85,883 to 86,044
GFF4598
GFF4599 - Thiopurine S-methyltransferase, at 86,023 to 86,679
GFF4599
GFF4600 - 4,5-DOPA dioxygenase extradiol, at 86,783 to 87,550
GFF4600
GFF4601 - ATP-dependent RNA helicase DeaD, at 87,668 to 89,341
GFF4601
Position (kb) 86
87 Strain fitness (log2 ratio) -2
-1
0
1
2 at 85.551 kb on + strand, within GFF4597 at 85.551 kb on + strand, within GFF4597 at 85.551 kb on + strand, within GFF4597 at 85.552 kb on - strand, within GFF4597 at 85.552 kb on - strand, within GFF4597 at 85.554 kb on + strand, within GFF4597 at 85.554 kb on + strand, within GFF4597 at 85.554 kb on + strand, within GFF4597 at 85.554 kb on + strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.555 kb on - strand, within GFF4597 at 85.823 kb on + strand at 85.824 kb on - strand at 85.900 kb on + strand, within GFF4598 at 86.024 kb on + strand at 86.024 kb on + strand at 86.024 kb on + strand at 86.025 kb on - strand at 86.104 kb on - strand, within GFF4599 at 86.208 kb on - strand, within GFF4599 at 86.479 kb on + strand, within GFF4599 at 86.480 kb on - strand, within GFF4599 at 86.606 kb on + strand, within GFF4599 at 86.606 kb on + strand, within GFF4599 at 86.660 kb on + strand at 86.719 kb on + strand at 86.720 kb on - strand at 86.720 kb on - strand at 86.720 kb on - strand at 86.720 kb on - strand at 86.720 kb on - strand at 86.720 kb on - strand at 86.721 kb on + strand at 86.721 kb on + strand at 86.722 kb on - strand at 86.722 kb on - strand at 86.764 kb on - strand at 87.458 kb on + strand, within GFF4600 at 87.459 kb on - strand, within GFF4600 at 87.459 kb on - strand, within GFF4600 at 87.527 kb on - strand at 87.532 kb on + strand at 87.533 kb on - strand at 87.533 kb on - strand at 87.536 kb on + strand at 87.537 kb on - strand at 87.590 kb on - strand at 87.639 kb on + strand at 87.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 85,551 + GFF4597 0.66 -2.6 85,551 + GFF4597 0.66 +0.3 85,551 + GFF4597 0.66 -0.6 85,552 - GFF4597 0.66 -0.6 85,552 - GFF4597 0.66 +0.2 85,554 + GFF4597 0.67 +0.7 85,554 + GFF4597 0.67 -0.9 85,554 + GFF4597 0.67 -1.4 85,554 + GFF4597 0.67 +0.4 85,555 - GFF4597 0.67 +0.3 85,555 - GFF4597 0.67 -1.1 85,555 - GFF4597 0.67 -1.7 85,555 - GFF4597 0.67 +1.0 85,555 - GFF4597 0.67 +1.0 85,555 - GFF4597 0.67 -0.2 85,555 - GFF4597 0.67 -0.8 85,555 - GFF4597 0.67 +0.0 85,555 - GFF4597 0.67 -1.6 85,823 + +0.9 85,824 - -0.5 85,900 + GFF4598 0.10 -0.1 86,024 + +1.0 86,024 + -0.6 86,024 + +0.3 86,025 - -0.4 86,104 - GFF4599 0.12 +0.5 86,208 - GFF4599 0.28 +1.2 86,479 + GFF4599 0.69 +2.1 86,480 - GFF4599 0.70 -2.1 86,606 + GFF4599 0.89 +0.1 86,606 + GFF4599 0.89 +0.7 86,660 + -0.5 86,719 + -1.0 86,720 - +0.3 86,720 - +0.6 86,720 - -0.3 86,720 - -0.4 86,720 - +0.2 86,720 - +1.1 86,721 + -0.3 86,721 + +0.4 86,722 - -0.2 86,722 - +0.6 86,764 - -0.5 87,458 + GFF4600 0.88 +0.3 87,459 - GFF4600 0.88 -0.7 87,459 - GFF4600 0.88 -0.5 87,527 - +0.3 87,532 + +0.2 87,533 - +0.2 87,533 - +0.1 87,536 + -1.2 87,537 - -0.9 87,590 - -0.3 87,639 + -0.9 87,640 - -0.4
Or see this region's nucleotide sequence