Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF43 and GFF44 are separated by 63 nucleotides GFF44 and GFF45 are separated by 85 nucleotides GFF45 and GFF46 overlap by 10 nucleotides
GFF43 - hypothetical protein, at 46,376 to 47,938
GFF43
GFF44 - Multifunctional CCA protein, at 48,002 to 49,231
GFF44
GFF45 - hypothetical protein, at 49,317 to 49,835
GFF45
GFF46 - Dihydroneopterin aldolase, at 49,826 to 50,182
GFF46
Position (kb) 48
49
50 Strain fitness (log2 ratio) -2
-1
0
1
2 at 47.045 kb on + strand, within GFF43 at 47.100 kb on - strand, within GFF43 at 47.177 kb on + strand, within GFF43 at 47.177 kb on + strand, within GFF43 at 47.178 kb on - strand, within GFF43 at 47.178 kb on - strand, within GFF43 at 47.237 kb on + strand, within GFF43 at 47.237 kb on + strand, within GFF43 at 47.258 kb on + strand, within GFF43 at 47.349 kb on - strand, within GFF43 at 47.349 kb on - strand, within GFF43 at 47.349 kb on - strand, within GFF43 at 47.349 kb on - strand, within GFF43 at 47.352 kb on - strand, within GFF43 at 47.390 kb on + strand, within GFF43 at 47.390 kb on + strand, within GFF43 at 47.390 kb on + strand, within GFF43 at 47.390 kb on + strand, within GFF43 at 47.423 kb on - strand, within GFF43 at 47.423 kb on - strand, within GFF43 at 47.528 kb on + strand, within GFF43 at 47.528 kb on + strand, within GFF43 at 47.529 kb on - strand, within GFF43 at 47.529 kb on - strand, within GFF43 at 47.529 kb on - strand, within GFF43 at 47.529 kb on - strand, within GFF43 at 47.529 kb on - strand, within GFF43 at 47.663 kb on + strand, within GFF43 at 47.664 kb on - strand, within GFF43 at 47.664 kb on - strand, within GFF43 at 47.699 kb on + strand, within GFF43 at 48.618 kb on + strand, within GFF44 at 48.618 kb on + strand, within GFF44 at 48.795 kb on + strand, within GFF44 at 48.811 kb on + strand, within GFF44 at 49.208 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 47,045 + GFF43 0.43 -0.8 47,100 - GFF43 0.46 -1.6 47,177 + GFF43 0.51 +1.4 47,177 + GFF43 0.51 +1.9 47,178 - GFF43 0.51 -0.0 47,178 - GFF43 0.51 -0.1 47,237 + GFF43 0.55 -0.6 47,237 + GFF43 0.55 -0.1 47,258 + GFF43 0.56 -0.4 47,349 - GFF43 0.62 -0.3 47,349 - GFF43 0.62 -1.4 47,349 - GFF43 0.62 -1.0 47,349 - GFF43 0.62 -2.4 47,352 - GFF43 0.62 -0.4 47,390 + GFF43 0.65 -0.3 47,390 + GFF43 0.65 -1.3 47,390 + GFF43 0.65 -1.4 47,390 + GFF43 0.65 -0.3 47,423 - GFF43 0.67 +0.4 47,423 - GFF43 0.67 -0.5 47,528 + GFF43 0.74 -1.5 47,528 + GFF43 0.74 +0.2 47,529 - GFF43 0.74 -1.0 47,529 - GFF43 0.74 -1.3 47,529 - GFF43 0.74 -0.6 47,529 - GFF43 0.74 -0.2 47,529 - GFF43 0.74 +0.5 47,663 + GFF43 0.82 -1.7 47,664 - GFF43 0.82 -0.4 47,664 - GFF43 0.82 -0.1 47,699 + GFF43 0.85 -0.1 48,618 + GFF44 0.50 -1.9 48,618 + GFF44 0.50 -1.9 48,795 + GFF44 0.64 -0.4 48,811 + GFF44 0.66 -1.4 49,208 + -0.2
Or see this region's nucleotide sequence