Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4159 and GFF4160 overlap by 4 nucleotides GFF4160 and GFF4161 are separated by 203 nucleotides GFF4161 and GFF4162 are separated by 7 nucleotides GFF4162 and GFF4163 are separated by 88 nucleotides
GFF4159 - C4-dicarboxylate transport transcriptional regulatory protein DctD, at 122,972 to 124,354
GFF4159
GFF4160 - hypothetical protein, at 124,351 to 124,806
GFF4160
GFF4161 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 125,010 to 125,837
GFF4161
GFF4162 - ADP compounds hydrolase NudE, at 125,845 to 126,414
GFF4162
GFF4163 - GMP/IMP nucleotidase YrfG, at 126,503 to 127,165
GFF4163
Position (kb) 125
126 Strain fitness (log2 ratio) -1
0
1 at 124.155 kb on + strand, within GFF4159 at 124.369 kb on + strand at 124.369 kb on + strand at 124.369 kb on + strand at 124.370 kb on - strand at 124.517 kb on - strand, within GFF4160 at 124.556 kb on + strand, within GFF4160 at 124.556 kb on + strand, within GFF4160 at 124.556 kb on + strand, within GFF4160 at 124.556 kb on + strand, within GFF4160 at 124.557 kb on - strand, within GFF4160 at 124.557 kb on - strand, within GFF4160 at 124.557 kb on - strand, within GFF4160 at 124.699 kb on + strand, within GFF4160 at 124.699 kb on + strand, within GFF4160 at 124.699 kb on + strand, within GFF4160 at 124.700 kb on - strand, within GFF4160 at 124.780 kb on - strand at 124.790 kb on - strand at 124.790 kb on - strand at 124.867 kb on + strand at 124.867 kb on + strand at 124.868 kb on - strand at 124.875 kb on + strand at 124.876 kb on - strand at 125.104 kb on + strand, within GFF4161 at 125.354 kb on + strand, within GFF4161 at 125.452 kb on + strand, within GFF4161 at 125.490 kb on + strand, within GFF4161 at 125.490 kb on + strand, within GFF4161 at 125.490 kb on + strand, within GFF4161 at 125.491 kb on - strand, within GFF4161 at 125.894 kb on + strand at 125.894 kb on + strand at 125.894 kb on + strand at 125.894 kb on + strand at 125.895 kb on - strand at 125.895 kb on - strand at 125.895 kb on - strand at 125.895 kb on - strand at 126.017 kb on + strand, within GFF4162 at 126.018 kb on - strand, within GFF4162 at 126.018 kb on - strand, within GFF4162 at 126.018 kb on - strand, within GFF4162 at 126.018 kb on - strand, within GFF4162 at 126.059 kb on + strand, within GFF4162 at 126.197 kb on + strand, within GFF4162 at 126.198 kb on - strand, within GFF4162 at 126.198 kb on - strand, within GFF4162 at 126.219 kb on - strand, within GFF4162 at 126.308 kb on + strand, within GFF4162 at 126.308 kb on + strand, within GFF4162 at 126.308 kb on + strand, within GFF4162 at 126.309 kb on - strand, within GFF4162 at 126.309 kb on - strand, within GFF4162 at 126.309 kb on - strand, within GFF4162 at 126.309 kb on - strand, within GFF4162 at 126.394 kb on + strand at 126.394 kb on + strand at 126.394 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.443 kb on + strand at 126.444 kb on - strand at 126.444 kb on - strand at 126.444 kb on - strand at 126.445 kb on + strand at 126.445 kb on + strand at 126.446 kb on - strand at 126.513 kb on + strand at 126.514 kb on - strand at 126.701 kb on + strand, within GFF4163
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 124,155 + GFF4159 0.86 +1.1 124,369 + +0.9 124,369 + -0.7 124,369 + +0.2 124,370 - +0.2 124,517 - GFF4160 0.36 -0.9 124,556 + GFF4160 0.45 -0.9 124,556 + GFF4160 0.45 +0.6 124,556 + GFF4160 0.45 +0.5 124,556 + GFF4160 0.45 +0.1 124,557 - GFF4160 0.45 -0.1 124,557 - GFF4160 0.45 +0.8 124,557 - GFF4160 0.45 +0.6 124,699 + GFF4160 0.76 -0.3 124,699 + GFF4160 0.76 -0.6 124,699 + GFF4160 0.76 -0.2 124,700 - GFF4160 0.77 +0.6 124,780 - -0.4 124,790 - +0.7 124,790 - +0.4 124,867 + +1.4 124,867 + -0.8 124,868 - +0.4 124,875 + -0.1 124,876 - +1.1 125,104 + GFF4161 0.11 -0.8 125,354 + GFF4161 0.42 -1.3 125,452 + GFF4161 0.53 -0.7 125,490 + GFF4161 0.58 -1.2 125,490 + GFF4161 0.58 -0.9 125,490 + GFF4161 0.58 -1.3 125,491 - GFF4161 0.58 -0.3 125,894 + +1.2 125,894 + -0.2 125,894 + +0.4 125,894 + -0.9 125,895 - -0.5 125,895 - +0.5 125,895 - -0.5 125,895 - -0.3 126,017 + GFF4162 0.30 -0.5 126,018 - GFF4162 0.30 +0.8 126,018 - GFF4162 0.30 +0.7 126,018 - GFF4162 0.30 +0.4 126,018 - GFF4162 0.30 +0.3 126,059 + GFF4162 0.38 -0.7 126,197 + GFF4162 0.62 +0.3 126,198 - GFF4162 0.62 +0.7 126,198 - GFF4162 0.62 -0.5 126,219 - GFF4162 0.66 +0.5 126,308 + GFF4162 0.81 -0.9 126,308 + GFF4162 0.81 -0.5 126,308 + GFF4162 0.81 +0.7 126,309 - GFF4162 0.81 +0.4 126,309 - GFF4162 0.81 -0.6 126,309 - GFF4162 0.81 +0.0 126,309 - GFF4162 0.81 -1.0 126,394 + +0.5 126,394 + -1.5 126,394 + +0.4 126,443 + +0.0 126,443 + +1.1 126,443 + -0.6 126,443 + +1.1 126,443 + -0.8 126,443 + -0.2 126,443 + +0.1 126,444 - -0.3 126,444 - -0.0 126,444 - -0.9 126,445 + +1.1 126,445 + -0.3 126,446 - +0.2 126,513 + -0.1 126,514 - +0.5 126,701 + GFF4163 0.30 +0.1
Or see this region's nucleotide sequence