Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4083 and GFF4084 are separated by 188 nucleotides GFF4084 and GFF4085 are separated by 43 nucleotides GFF4085 and GFF4086 are separated by 96 nucleotides GFF4086 and GFF4087 are separated by 57 nucleotides GFF4087 and GFF4088 are separated by 1 nucleotides
GFF4083 - hypothetical protein, at 39,140 to 41,131
GFF4083
GFF4084 - hypothetical protein, at 41,320 to 41,715
GFF4084
GFF4085 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 41,759 to 42,214
GFF4085
GFF4086 - Protein-export protein SecB, at 42,311 to 42,796
GFF4086
GFF4087 - Glutaredoxin 3, at 42,854 to 43,108
GFF4087
GFF4088 - putative protein YibN, at 43,110 to 43,523
GFF4088
Position (kb) 41
42
43 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 40.794 kb on + strand, within GFF4083 at 40.795 kb on - strand, within GFF4083 at 40.795 kb on - strand, within GFF4083 at 40.844 kb on + strand, within GFF4083 at 40.845 kb on - strand, within GFF4083 at 40.866 kb on + strand, within GFF4083 at 40.866 kb on + strand, within GFF4083 at 40.867 kb on - strand, within GFF4083 at 40.867 kb on - strand, within GFF4083 at 40.867 kb on - strand, within GFF4083 at 40.867 kb on - strand, within GFF4083 at 40.925 kb on + strand, within GFF4083 at 40.926 kb on - strand, within GFF4083 at 41.009 kb on - strand at 41.131 kb on + strand at 41.625 kb on + strand, within GFF4084 at 41.743 kb on - strand at 41.743 kb on - strand at 41.743 kb on - strand at 41.909 kb on + strand, within GFF4085 at 41.910 kb on - strand, within GFF4085 at 41.918 kb on + strand, within GFF4085 at 41.918 kb on + strand, within GFF4085 at 41.919 kb on - strand, within GFF4085 at 41.929 kb on - strand, within GFF4085 at 42.366 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.722 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.726 kb on + strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.727 kb on - strand, within GFF4086 at 42.837 kb on + strand at 42.837 kb on + strand at 42.837 kb on + strand at 42.838 kb on - strand at 42.838 kb on - strand at 42.900 kb on + strand, within GFF4087 at 42.900 kb on + strand, within GFF4087 at 42.901 kb on - strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 42.902 kb on + strand, within GFF4087 at 43.068 kb on + strand, within GFF4087 at 43.068 kb on + strand, within GFF4087 at 43.069 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.078 kb on - strand, within GFF4087 at 43.090 kb on - strand at 43.209 kb on - strand, within GFF4088 at 43.209 kb on - strand, within GFF4088
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 40,794 + GFF4083 0.83 -0.4 40,795 - GFF4083 0.83 -0.3 40,795 - GFF4083 0.83 -0.7 40,844 + GFF4083 0.86 +0.9 40,845 - GFF4083 0.86 +0.6 40,866 + GFF4083 0.87 +0.7 40,866 + GFF4083 0.87 +0.4 40,867 - GFF4083 0.87 +0.6 40,867 - GFF4083 0.87 -3.0 40,867 - GFF4083 0.87 +0.8 40,867 - GFF4083 0.87 +1.1 40,925 + GFF4083 0.90 +0.8 40,926 - GFF4083 0.90 +0.0 41,009 - +0.1 41,131 + -0.5 41,625 + GFF4084 0.77 -1.2 41,743 - -0.0 41,743 - +0.4 41,743 - -0.0 41,909 + GFF4085 0.33 +0.8 41,910 - GFF4085 0.33 -0.8 41,918 + GFF4085 0.35 +0.9 41,918 + GFF4085 0.35 +0.6 41,919 - GFF4085 0.35 +0.1 41,929 - GFF4085 0.37 +0.2 42,366 + GFF4086 0.11 -0.2 42,722 + GFF4086 0.85 +0.2 42,722 + GFF4086 0.85 +0.7 42,722 + GFF4086 0.85 +0.5 42,722 + GFF4086 0.85 -0.2 42,726 + GFF4086 0.85 +0.3 42,726 + GFF4086 0.85 -0.2 42,726 + GFF4086 0.85 +0.7 42,726 + GFF4086 0.85 -0.9 42,726 + GFF4086 0.85 +0.7 42,726 + GFF4086 0.85 -0.4 42,726 + GFF4086 0.85 -0.2 42,726 + GFF4086 0.85 -0.0 42,727 - GFF4086 0.86 -0.2 42,727 - GFF4086 0.86 -0.1 42,727 - GFF4086 0.86 -0.8 42,727 - GFF4086 0.86 -1.7 42,727 - GFF4086 0.86 +0.4 42,727 - GFF4086 0.86 +0.0 42,727 - GFF4086 0.86 +1.1 42,727 - GFF4086 0.86 +0.7 42,727 - GFF4086 0.86 -0.3 42,727 - GFF4086 0.86 -1.3 42,837 + +0.6 42,837 + -0.4 42,837 + -1.2 42,838 - +0.7 42,838 - -1.0 42,900 + GFF4087 0.18 +0.8 42,900 + GFF4087 0.18 +0.7 42,901 - GFF4087 0.18 -0.3 42,902 + GFF4087 0.19 -0.9 42,902 + GFF4087 0.19 +0.4 42,902 + GFF4087 0.19 -0.1 43,068 + GFF4087 0.84 +1.2 43,068 + GFF4087 0.84 -0.0 43,069 - GFF4087 0.84 -0.4 43,078 - GFF4087 0.88 -0.7 43,078 - GFF4087 0.88 -0.2 43,078 - GFF4087 0.88 +2.1 43,090 - +0.5 43,209 - GFF4088 0.24 +0.7 43,209 - GFF4088 0.24 -1.4
Or see this region's nucleotide sequence