Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4027 and GFF4028 are separated by 435 nucleotides GFF4028 and GFF4029 are separated by 3 nucleotides GFF4029 and GFF4030 are separated by 733 nucleotides
GFF4027 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 290,703 to 291,503
GFF4027
GFF4028 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 291,939 to 292,424
GFF4028
GFF4029 - Poly(A) polymerase I, at 292,428 to 293,828
GFF4029
GFF4030 - Transcriptional regulatory protein ZraR, at 294,562 to 295,998
GFF4030
Position (kb) 292
293
294 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 291.431 kb on - strand at 291.431 kb on - strand at 291.566 kb on + strand at 291.567 kb on - strand at 291.648 kb on + strand at 291.648 kb on + strand at 291.648 kb on + strand at 291.649 kb on - strand at 291.649 kb on - strand at 291.649 kb on - strand at 291.649 kb on - strand at 291.650 kb on + strand at 291.650 kb on + strand at 291.651 kb on - strand at 291.714 kb on - strand at 291.854 kb on + strand at 291.854 kb on + strand at 291.854 kb on + strand at 291.854 kb on + strand at 291.855 kb on - strand at 291.855 kb on - strand at 291.855 kb on - strand at 291.855 kb on - strand at 291.855 kb on - strand at 291.860 kb on + strand at 291.861 kb on - strand at 291.896 kb on + strand at 291.897 kb on - strand at 291.913 kb on + strand at 291.913 kb on + strand at 291.913 kb on + strand at 292.976 kb on - strand, within GFF4029 at 292.988 kb on - strand, within GFF4029 at 292.988 kb on - strand, within GFF4029 at 293.333 kb on - strand, within GFF4029 at 293.333 kb on - strand, within GFF4029 at 293.336 kb on - strand, within GFF4029 at 293.336 kb on - strand, within GFF4029 at 293.659 kb on + strand, within GFF4029 at 293.659 kb on + strand, within GFF4029 at 293.659 kb on + strand, within GFF4029 at 293.659 kb on + strand, within GFF4029 at 293.660 kb on - strand, within GFF4029 at 293.660 kb on - strand, within GFF4029 at 293.784 kb on - strand at 293.861 kb on - strand at 293.896 kb on - strand at 293.896 kb on - strand at 293.896 kb on - strand at 293.896 kb on - strand at 293.902 kb on + strand at 293.932 kb on + strand at 293.933 kb on - strand at 293.933 kb on - strand at 293.954 kb on - strand at 293.954 kb on - strand at 294.002 kb on + strand at 294.002 kb on + strand at 294.003 kb on - strand at 294.003 kb on - strand at 294.003 kb on - strand at 294.003 kb on - strand at 294.031 kb on + strand at 294.032 kb on - strand at 294.032 kb on - strand at 294.049 kb on - strand at 294.051 kb on + strand at 294.186 kb on - strand at 294.199 kb on + strand at 294.200 kb on - strand at 294.200 kb on - strand at 294.247 kb on + strand at 294.247 kb on + strand at 294.248 kb on - strand at 294.248 kb on - strand at 294.268 kb on + strand at 294.300 kb on + strand at 294.301 kb on - strand at 294.325 kb on - strand at 294.331 kb on - strand at 294.331 kb on - strand at 294.331 kb on - strand at 294.331 kb on - strand at 294.352 kb on + strand at 294.353 kb on - strand at 294.353 kb on - strand at 294.372 kb on + strand at 294.372 kb on + strand at 294.372 kb on + strand at 294.375 kb on - strand at 294.422 kb on - strand at 294.431 kb on + strand at 294.493 kb on - strand at 294.710 kb on + strand, within GFF4030 at 294.710 kb on + strand, within GFF4030 at 294.710 kb on + strand, within GFF4030 at 294.711 kb on - strand, within GFF4030
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 291,431 - +0.0 291,431 - +0.4 291,566 + -1.2 291,567 - -0.4 291,648 + -0.5 291,648 + +0.5 291,648 + +1.2 291,649 - -0.0 291,649 - -0.1 291,649 - +1.3 291,649 - +0.6 291,650 + +0.5 291,650 + -0.7 291,651 - +0.4 291,714 - +0.1 291,854 + -0.4 291,854 + +0.3 291,854 + +1.0 291,854 + +0.0 291,855 - -0.3 291,855 - +0.7 291,855 - -0.1 291,855 - +0.4 291,855 - -1.0 291,860 + +0.2 291,861 - -1.0 291,896 + +0.7 291,897 - +1.7 291,913 + +0.0 291,913 + -0.1 291,913 + -0.2 292,976 - GFF4029 0.39 -2.4 292,988 - GFF4029 0.40 -0.6 292,988 - GFF4029 0.40 -1.0 293,333 - GFF4029 0.65 -2.6 293,333 - GFF4029 0.65 +0.6 293,336 - GFF4029 0.65 +0.1 293,336 - GFF4029 0.65 +1.3 293,659 + GFF4029 0.88 +1.9 293,659 + GFF4029 0.88 -1.0 293,659 + GFF4029 0.88 -0.7 293,659 + GFF4029 0.88 +0.6 293,660 - GFF4029 0.88 -1.6 293,660 - GFF4029 0.88 -1.2 293,784 - +0.6 293,861 - +0.9 293,896 - +1.0 293,896 - +0.6 293,896 - +0.5 293,896 - +0.3 293,902 + +1.0 293,932 + +0.6 293,933 - +0.1 293,933 - -2.4 293,954 - +1.1 293,954 - +0.4 294,002 + -1.1 294,002 + -0.2 294,003 - +0.8 294,003 - -1.1 294,003 - -0.2 294,003 - -0.1 294,031 + -0.3 294,032 - -0.3 294,032 - +0.0 294,049 - -1.1 294,051 + -0.4 294,186 - -0.1 294,199 + -0.7 294,200 - +0.0 294,200 - -0.4 294,247 + -1.9 294,247 + -0.9 294,248 - +1.3 294,248 - -0.6 294,268 + -0.1 294,300 + -0.3 294,301 - -0.1 294,325 - +0.3 294,331 - -1.7 294,331 - -0.4 294,331 - +0.3 294,331 - -0.6 294,352 + +0.5 294,353 - -0.4 294,353 - -0.1 294,372 + +0.5 294,372 + -1.1 294,372 + -0.4 294,375 - +1.0 294,422 - -2.2 294,431 + +0.6 294,493 - -1.0 294,710 + GFF4030 0.10 -0.7 294,710 + GFF4030 0.10 -1.4 294,710 + GFF4030 0.10 -0.4 294,711 - GFF4030 0.10 -2.8
Or see this region's nucleotide sequence