Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF37 and GFF38 are separated by 113 nucleotides GFF38 and GFF39 overlap by 1 nucleotides GFF39 and GFF40 are separated by 33 nucleotides GFF40 and GFF41 are separated by 296 nucleotides
GFF37 - Ribosomal RNA small subunit methyltransferase A, at 40,213 to 41,031
GFF37
GFF38 - Protein ApaG, at 41,145 to 41,525
GFF38
GFF39 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 41,525 to 42,406
GFF39
GFF40 - Thiosulfate sulfurtransferase GlpE, at 42,440 to 42,769
GFF40
GFF41 - hypothetical protein, at 43,066 to 44,988
GFF41
Position (kb) 41
42
43 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 40.549 kb on + strand, within GFF37 at 40.549 kb on + strand, within GFF37 at 40.549 kb on + strand, within GFF37 at 40.549 kb on + strand, within GFF37 at 40.550 kb on - strand, within GFF37 at 40.799 kb on + strand, within GFF37 at 41.071 kb on + strand at 41.071 kb on + strand at 41.072 kb on - strand at 41.082 kb on - strand at 41.090 kb on - strand at 41.109 kb on + strand at 41.109 kb on + strand at 41.110 kb on - strand at 41.132 kb on - strand at 41.190 kb on + strand, within GFF38 at 41.190 kb on + strand, within GFF38 at 41.191 kb on - strand, within GFF38 at 41.238 kb on + strand, within GFF38 at 41.239 kb on - strand, within GFF38 at 41.251 kb on + strand, within GFF38 at 41.252 kb on - strand, within GFF38 at 41.252 kb on - strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.391 kb on + strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.392 kb on - strand, within GFF38 at 41.393 kb on + strand, within GFF38 at 41.393 kb on + strand, within GFF38 at 41.394 kb on - strand, within GFF38 at 41.443 kb on - strand, within GFF38 at 41.443 kb on - strand, within GFF38 at 41.443 kb on - strand, within GFF38 at 41.534 kb on + strand at 41.534 kb on + strand at 41.535 kb on - strand at 41.535 kb on - strand at 41.681 kb on + strand, within GFF39 at 41.852 kb on + strand, within GFF39 at 41.853 kb on - strand, within GFF39 at 41.853 kb on - strand, within GFF39 at 41.853 kb on - strand, within GFF39 at 41.979 kb on - strand, within GFF39 at 41.993 kb on + strand, within GFF39 at 41.994 kb on - strand, within GFF39 at 42.058 kb on + strand, within GFF39 at 42.058 kb on + strand, within GFF39 at 42.058 kb on + strand, within GFF39 at 42.059 kb on - strand, within GFF39 at 42.062 kb on + strand, within GFF39 at 42.062 kb on + strand, within GFF39 at 42.063 kb on - strand, within GFF39 at 42.147 kb on - strand, within GFF39 at 42.370 kb on + strand at 42.371 kb on - strand at 42.405 kb on - strand at 42.426 kb on + strand at 42.426 kb on + strand at 42.427 kb on - strand at 42.427 kb on - strand at 42.427 kb on - strand at 42.544 kb on + strand, within GFF40 at 42.544 kb on + strand, within GFF40 at 42.544 kb on + strand, within GFF40 at 42.545 kb on - strand, within GFF40 at 42.545 kb on - strand, within GFF40 at 42.633 kb on - strand, within GFF40 at 42.665 kb on + strand, within GFF40 at 42.666 kb on - strand, within GFF40 at 42.695 kb on + strand, within GFF40 at 42.695 kb on + strand, within GFF40 at 42.696 kb on - strand, within GFF40 at 42.696 kb on - strand, within GFF40 at 42.696 kb on - strand, within GFF40 at 42.696 kb on - strand, within GFF40 at 42.696 kb on - strand, within GFF40 at 42.735 kb on - strand, within GFF40 at 42.735 kb on - strand, within GFF40 at 42.767 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.838 kb on + strand at 42.839 kb on - strand at 42.839 kb on - strand at 42.839 kb on - strand at 42.839 kb on - strand at 42.839 kb on - strand at 42.839 kb on - strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.842 kb on + strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.843 kb on - strand at 42.847 kb on - strand at 42.847 kb on - strand at 42.847 kb on - strand at 42.857 kb on + strand at 42.858 kb on - strand at 42.858 kb on - strand at 42.858 kb on - strand at 42.858 kb on - strand at 42.876 kb on + strand at 42.876 kb on + strand at 42.877 kb on - strand at 42.882 kb on + strand at 42.917 kb on - strand at 42.942 kb on + strand at 42.942 kb on + strand at 42.942 kb on + strand at 42.943 kb on - strand at 43.048 kb on - strand at 43.071 kb on + strand at 43.071 kb on + strand at 43.071 kb on + strand at 43.135 kb on + strand at 43.136 kb on - strand at 43.168 kb on + strand at 43.169 kb on - strand at 43.191 kb on - strand at 43.336 kb on + strand, within GFF41 at 43.385 kb on - strand, within GFF41 at 43.385 kb on - strand, within GFF41
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 40,549 + GFF37 0.41 -0.7 40,549 + GFF37 0.41 -3.0 40,549 + GFF37 0.41 +0.0 40,549 + GFF37 0.41 -0.4 40,550 - GFF37 0.41 +0.2 40,799 + GFF37 0.72 -0.9 41,071 + -0.3 41,071 + -0.1 41,072 - +1.2 41,082 - -0.7 41,090 - -0.4 41,109 + +0.3 41,109 + -0.1 41,110 - +0.0 41,132 - +1.2 41,190 + GFF38 0.12 -0.4 41,190 + GFF38 0.12 -0.4 41,191 - GFF38 0.12 -2.2 41,238 + GFF38 0.24 -0.3 41,239 - GFF38 0.25 -0.5 41,251 + GFF38 0.28 +0.3 41,252 - GFF38 0.28 -0.3 41,252 - GFF38 0.28 -0.9 41,391 + GFF38 0.65 -0.2 41,391 + GFF38 0.65 +1.4 41,391 + GFF38 0.65 -0.8 41,391 + GFF38 0.65 -0.7 41,391 + GFF38 0.65 +0.2 41,391 + GFF38 0.65 -0.5 41,391 + GFF38 0.65 +0.0 41,391 + GFF38 0.65 +0.6 41,392 - GFF38 0.65 +0.3 41,392 - GFF38 0.65 +0.4 41,392 - GFF38 0.65 -0.3 41,392 - GFF38 0.65 +0.3 41,392 - GFF38 0.65 -1.1 41,392 - GFF38 0.65 +0.6 41,392 - GFF38 0.65 +1.0 41,393 + GFF38 0.65 +0.3 41,393 + GFF38 0.65 -0.6 41,394 - GFF38 0.65 +1.4 41,443 - GFF38 0.78 +0.8 41,443 - GFF38 0.78 +0.2 41,443 - GFF38 0.78 +0.5 41,534 + -0.9 41,534 + +0.2 41,535 - -0.7 41,535 - +0.3 41,681 + GFF39 0.18 -1.7 41,852 + GFF39 0.37 +0.0 41,853 - GFF39 0.37 -0.2 41,853 - GFF39 0.37 -1.5 41,853 - GFF39 0.37 -0.7 41,979 - GFF39 0.51 -0.6 41,993 + GFF39 0.53 -1.2 41,994 - GFF39 0.53 -0.4 42,058 + GFF39 0.60 -1.0 42,058 + GFF39 0.60 +0.3 42,058 + GFF39 0.60 -1.2 42,059 - GFF39 0.61 -0.5 42,062 + GFF39 0.61 -1.2 42,062 + GFF39 0.61 -0.9 42,063 - GFF39 0.61 -0.8 42,147 - GFF39 0.71 -1.2 42,370 + -0.4 42,371 - +0.5 42,405 - +0.1 42,426 + +0.1 42,426 + +0.7 42,427 - -0.6 42,427 - +0.2 42,427 - +0.5 42,544 + GFF40 0.32 -0.2 42,544 + GFF40 0.32 -0.1 42,544 + GFF40 0.32 -0.3 42,545 - GFF40 0.32 -1.0 42,545 - GFF40 0.32 -0.6 42,633 - GFF40 0.58 +0.0 42,665 + GFF40 0.68 -0.3 42,666 - GFF40 0.68 +0.5 42,695 + GFF40 0.77 -0.2 42,695 + GFF40 0.77 +0.3 42,696 - GFF40 0.78 +0.0 42,696 - GFF40 0.78 -0.1 42,696 - GFF40 0.78 +0.0 42,696 - GFF40 0.78 -0.5 42,696 - GFF40 0.78 -0.6 42,735 - GFF40 0.89 -1.3 42,735 - GFF40 0.89 -0.1 42,767 + +0.8 42,838 + -0.5 42,838 + -1.2 42,838 + -0.5 42,838 + -0.1 42,838 + -1.2 42,838 + +0.5 42,838 + +0.3 42,838 + -0.9 42,838 + -2.2 42,839 - -1.1 42,839 - -2.2 42,839 - -0.1 42,839 - -0.8 42,839 - +1.6 42,839 - -0.6 42,842 + +0.8 42,842 + +0.6 42,842 + -0.9 42,842 + +0.0 42,842 + +0.2 42,842 + -0.4 42,842 + +1.2 42,843 - +1.5 42,843 - +0.8 42,843 - +0.7 42,843 - -0.3 42,843 - -1.1 42,843 - -0.1 42,847 - +0.4 42,847 - +0.6 42,847 - +0.4 42,857 + -0.4 42,858 - -0.4 42,858 - -0.0 42,858 - -0.2 42,858 - +1.4 42,876 + +0.8 42,876 + +0.9 42,877 - -1.2 42,882 + -0.3 42,917 - +1.4 42,942 + -0.6 42,942 + -0.7 42,942 + -0.0 42,943 - -0.1 43,048 - -1.0 43,071 + -1.2 43,071 + -0.3 43,071 + -0.1 43,135 + +0.0 43,136 - -0.8 43,168 + -0.5 43,169 - -0.6 43,191 - +0.6 43,336 + GFF41 0.14 -0.2 43,385 - GFF41 0.17 -1.7 43,385 - GFF41 0.17 -0.2
Or see this region's nucleotide sequence