Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3727 and GFF3728 are separated by 9 nucleotides GFF3728 and GFF3729 are separated by 74 nucleotides GFF3729 and GFF3730 are separated by 4 nucleotides
GFF3727 - Oxidoreductase P35, at 338,364 to 339,329
GFF3727
GFF3728 - Dye-decolorizing peroxidase YfeX, at 339,339 to 340,226
GFF3728
GFF3729 - hypothetical protein, at 340,301 to 341,044
GFF3729
GFF3730 - Putative thiamine pyrophosphate-containing protein YdaP, at 341,049 to 342,836
GFF3730
Position (kb) 339
340
341 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 338.362 kb on - strand at 338.447 kb on + strand at 338.484 kb on - strand, within GFF3727 at 338.749 kb on + strand, within GFF3727 at 338.749 kb on + strand, within GFF3727 at 338.749 kb on + strand, within GFF3727 at 338.749 kb on + strand, within GFF3727 at 338.749 kb on + strand, within GFF3727 at 338.792 kb on - strand, within GFF3727 at 338.959 kb on + strand, within GFF3727 at 338.959 kb on + strand, within GFF3727 at 338.959 kb on + strand, within GFF3727 at 339.085 kb on + strand, within GFF3727 at 339.086 kb on - strand, within GFF3727 at 339.118 kb on + strand, within GFF3727 at 339.119 kb on - strand, within GFF3727 at 339.119 kb on - strand, within GFF3727 at 339.119 kb on - strand, within GFF3727 at 339.119 kb on - strand, within GFF3727 at 339.166 kb on + strand, within GFF3727 at 339.329 kb on + strand at 339.329 kb on + strand at 339.330 kb on - strand at 339.397 kb on + strand at 339.401 kb on - strand at 339.430 kb on + strand, within GFF3728 at 339.430 kb on + strand, within GFF3728 at 339.431 kb on - strand, within GFF3728 at 339.917 kb on + strand, within GFF3728 at 340.216 kb on + strand at 340.219 kb on + strand at 340.219 kb on + strand at 340.220 kb on - strand at 340.220 kb on - strand at 340.220 kb on - strand at 340.220 kb on - strand at 340.256 kb on + strand at 340.257 kb on - strand at 340.262 kb on + strand at 340.443 kb on + strand, within GFF3729 at 340.455 kb on + strand, within GFF3729 at 340.455 kb on + strand, within GFF3729 at 340.455 kb on + strand, within GFF3729 at 340.455 kb on + strand, within GFF3729 at 340.456 kb on - strand, within GFF3729 at 340.467 kb on + strand, within GFF3729 at 340.631 kb on + strand, within GFF3729 at 340.631 kb on + strand, within GFF3729 at 340.632 kb on - strand, within GFF3729 at 340.900 kb on - strand, within GFF3729 at 340.900 kb on - strand, within GFF3729 at 340.995 kb on - strand at 340.995 kb on - strand at 341.019 kb on + strand at 341.019 kb on + strand at 341.020 kb on - strand at 341.020 kb on - strand at 341.020 kb on - strand at 341.020 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 338,362 - +0.1 338,447 + -0.0 338,484 - GFF3727 0.12 +0.1 338,749 + GFF3727 0.40 -0.9 338,749 + GFF3727 0.40 +1.5 338,749 + GFF3727 0.40 +0.5 338,749 + GFF3727 0.40 +0.2 338,749 + GFF3727 0.40 -0.5 338,792 - GFF3727 0.44 +0.1 338,959 + GFF3727 0.62 -0.8 338,959 + GFF3727 0.62 -0.3 338,959 + GFF3727 0.62 +0.7 339,085 + GFF3727 0.75 +0.5 339,086 - GFF3727 0.75 -1.3 339,118 + GFF3727 0.78 +0.1 339,119 - GFF3727 0.78 -1.5 339,119 - GFF3727 0.78 +0.6 339,119 - GFF3727 0.78 -1.3 339,119 - GFF3727 0.78 +0.6 339,166 + GFF3727 0.83 -0.2 339,329 + +0.5 339,329 + +0.5 339,330 - +0.3 339,397 + +0.0 339,401 - -0.1 339,430 + GFF3728 0.10 +0.3 339,430 + GFF3728 0.10 -0.1 339,431 - GFF3728 0.10 +1.1 339,917 + GFF3728 0.65 -2.0 340,216 + -0.1 340,219 + -1.1 340,219 + +0.9 340,220 - +1.4 340,220 - -0.5 340,220 - +0.1 340,220 - +0.1 340,256 + +0.5 340,257 - +0.7 340,262 + -1.1 340,443 + GFF3729 0.19 -0.3 340,455 + GFF3729 0.21 -0.1 340,455 + GFF3729 0.21 -0.3 340,455 + GFF3729 0.21 +0.5 340,455 + GFF3729 0.21 -0.4 340,456 - GFF3729 0.21 -0.9 340,467 + GFF3729 0.22 -0.2 340,631 + GFF3729 0.44 +0.0 340,631 + GFF3729 0.44 -2.8 340,632 - GFF3729 0.44 -0.5 340,900 - GFF3729 0.81 -0.5 340,900 - GFF3729 0.81 -0.7 340,995 - +0.5 340,995 - +0.3 341,019 + +2.1 341,019 + +1.6 341,020 - -1.2 341,020 - -0.3 341,020 - -0.6 341,020 - -0.1
Or see this region's nucleotide sequence