Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3681 and GFF3682 are separated by 11 nucleotides GFF3682 and GFF3683 overlap by 4 nucleotides GFF3683 and GFF3684 are separated by 78 nucleotides GFF3684 and GFF3685 are separated by 116 nucleotides
GFF3681 - hypothetical protein, at 277,487 to 277,684
GFF3681
GFF3682 - hypothetical protein, at 277,696 to 278,397
GFF3682
GFF3683 - Cobalt-precorrin-5A hydrolase, at 278,394 to 278,807
GFF3683
GFF3684 - Precorrin-4 C(11)-methyltransferase, at 278,886 to 279,632
GFF3684
GFF3685 - Fe/S biogenesis protein NfuA, at 279,749 to 280,333
GFF3685
Position (kb) 278
279 Strain fitness (log2 ratio) -1
0
1
2 at 277.486 kb on + strand at 277.486 kb on + strand at 277.487 kb on - strand at 277.487 kb on - strand at 277.505 kb on - strand at 277.707 kb on + strand at 277.707 kb on + strand at 277.707 kb on + strand at 277.707 kb on + strand at 277.708 kb on - strand at 277.979 kb on - strand, within GFF3682 at 277.979 kb on - strand, within GFF3682 at 277.979 kb on - strand, within GFF3682 at 277.979 kb on - strand, within GFF3682 at 277.979 kb on - strand, within GFF3682 at 278.429 kb on - strand at 278.462 kb on + strand, within GFF3683 at 278.463 kb on - strand, within GFF3683 at 278.476 kb on + strand, within GFF3683 at 278.538 kb on - strand, within GFF3683 at 278.631 kb on + strand, within GFF3683 at 278.770 kb on - strand at 278.806 kb on - strand at 278.895 kb on + strand at 278.895 kb on + strand at 278.895 kb on + strand at 278.895 kb on + strand at 278.896 kb on - strand at 278.979 kb on + strand, within GFF3684 at 278.979 kb on + strand, within GFF3684 at 278.979 kb on + strand, within GFF3684 at 278.979 kb on + strand, within GFF3684 at 278.980 kb on - strand, within GFF3684 at 279.142 kb on - strand, within GFF3684 at 279.597 kb on + strand at 279.597 kb on + strand at 279.598 kb on - strand at 279.621 kb on + strand at 279.622 kb on - strand at 279.698 kb on + strand at 279.750 kb on + strand at 279.750 kb on + strand at 279.750 kb on + strand at 279.750 kb on + strand at 279.750 kb on + strand at 279.751 kb on - strand at 279.751 kb on - strand at 279.753 kb on + strand at 279.754 kb on - strand at 279.754 kb on - strand at 279.756 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 277,486 + -0.5 277,486 + -0.8 277,487 - -0.1 277,487 - -0.4 277,505 - -0.2 277,707 + +0.5 277,707 + +0.4 277,707 + +0.5 277,707 + -0.5 277,708 - +1.0 277,979 - GFF3682 0.40 -0.5 277,979 - GFF3682 0.40 +0.1 277,979 - GFF3682 0.40 -0.6 277,979 - GFF3682 0.40 +0.1 277,979 - GFF3682 0.40 -0.3 278,429 - -0.5 278,462 + GFF3683 0.16 +2.1 278,463 - GFF3683 0.17 -0.1 278,476 + GFF3683 0.20 +0.0 278,538 - GFF3683 0.35 +0.4 278,631 + GFF3683 0.57 -0.0 278,770 - -0.4 278,806 - -1.3 278,895 + +0.5 278,895 + -0.0 278,895 + -0.4 278,895 + +0.5 278,896 - -0.2 278,979 + GFF3684 0.12 +1.8 278,979 + GFF3684 0.12 -0.1 278,979 + GFF3684 0.12 +0.6 278,979 + GFF3684 0.12 +1.7 278,980 - GFF3684 0.13 -0.1 279,142 - GFF3684 0.34 -1.0 279,597 + +0.5 279,597 + +0.7 279,598 - +0.0 279,621 + +1.2 279,622 - -1.2 279,698 + +0.6 279,750 + +0.1 279,750 + -0.1 279,750 + -0.4 279,750 + +0.2 279,750 + -1.0 279,751 - +1.2 279,751 - +0.6 279,753 + +0.5 279,754 - -0.8 279,754 - +0.3 279,756 + -0.5
Or see this region's nucleotide sequence