Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3428 and GFF3429 overlap by 8 nucleotides GFF3429 and GFF3430 overlap by 20 nucleotides
GFF3428 - hypothetical protein, at 432,855 to 434,318
GFF3428
GFF3429 - hypothetical protein, at 434,311 to 434,859
GFF3429
GFF3430 - hypothetical protein, at 434,840 to 437,014
GFF3430
Position (kb) 434
435 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.401 kb on - strand, within GFF3428 at 433.508 kb on + strand, within GFF3428 at 433.609 kb on + strand, within GFF3428 at 433.611 kb on + strand, within GFF3428 at 433.612 kb on - strand, within GFF3428 at 433.612 kb on - strand, within GFF3428 at 433.615 kb on + strand, within GFF3428 at 433.634 kb on - strand, within GFF3428 at 433.658 kb on + strand, within GFF3428 at 433.777 kb on - strand, within GFF3428 at 433.798 kb on + strand, within GFF3428 at 433.829 kb on - strand, within GFF3428 at 433.841 kb on + strand, within GFF3428 at 433.861 kb on - strand, within GFF3428 at 433.867 kb on - strand, within GFF3428 at 434.201 kb on + strand at 434.264 kb on + strand at 434.264 kb on + strand at 434.265 kb on - strand at 434.284 kb on - strand at 434.302 kb on + strand at 434.303 kb on - strand at 434.469 kb on + strand, within GFF3429 at 434.498 kb on + strand, within GFF3429 at 434.498 kb on + strand, within GFF3429 at 434.626 kb on + strand, within GFF3429 at 434.626 kb on + strand, within GFF3429 at 434.626 kb on + strand, within GFF3429 at 434.626 kb on + strand, within GFF3429 at 434.627 kb on - strand, within GFF3429 at 434.627 kb on - strand, within GFF3429 at 434.627 kb on - strand, within GFF3429 at 434.800 kb on + strand, within GFF3429 at 434.800 kb on + strand, within GFF3429 at 434.850 kb on + strand at 434.851 kb on - strand at 434.899 kb on - strand at 434.938 kb on + strand at 434.979 kb on + strand at 435.213 kb on + strand, within GFF3430 at 435.213 kb on + strand, within GFF3430 at 435.213 kb on + strand, within GFF3430 at 435.214 kb on - strand, within GFF3430 at 435.251 kb on - strand, within GFF3430 at 435.298 kb on - strand, within GFF3430 at 435.461 kb on - strand, within GFF3430 at 435.461 kb on - strand, within GFF3430 at 435.491 kb on + strand, within GFF3430 at 435.524 kb on - strand, within GFF3430 at 435.524 kb on - strand, within GFF3430 at 435.583 kb on + strand, within GFF3430 at 435.614 kb on + strand, within GFF3430 at 435.615 kb on - strand, within GFF3430 at 435.638 kb on - strand, within GFF3430 at 435.678 kb on - strand, within GFF3430 at 435.770 kb on + strand, within GFF3430
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 433,401 - GFF3428 0.37 -1.4 433,508 + GFF3428 0.45 -0.5 433,609 + GFF3428 0.52 -0.1 433,611 + GFF3428 0.52 -0.6 433,612 - GFF3428 0.52 -0.1 433,612 - GFF3428 0.52 +1.9 433,615 + GFF3428 0.52 +0.5 433,634 - GFF3428 0.53 -1.0 433,658 + GFF3428 0.55 -1.9 433,777 - GFF3428 0.63 +0.5 433,798 + GFF3428 0.64 +0.7 433,829 - GFF3428 0.67 -0.6 433,841 + GFF3428 0.67 +0.2 433,861 - GFF3428 0.69 +0.5 433,867 - GFF3428 0.69 +0.3 434,201 + -0.1 434,264 + -0.5 434,264 + -0.2 434,265 - +0.5 434,284 - +0.1 434,302 + +0.2 434,303 - +0.2 434,469 + GFF3429 0.29 +1.4 434,498 + GFF3429 0.34 +0.6 434,498 + GFF3429 0.34 -1.1 434,626 + GFF3429 0.57 +0.8 434,626 + GFF3429 0.57 +0.4 434,626 + GFF3429 0.57 -0.2 434,626 + GFF3429 0.57 +0.3 434,627 - GFF3429 0.58 +0.7 434,627 - GFF3429 0.58 +0.9 434,627 - GFF3429 0.58 +0.1 434,800 + GFF3429 0.89 +0.2 434,800 + GFF3429 0.89 +1.1 434,850 + -0.1 434,851 - -1.6 434,899 - -0.5 434,938 + -0.2 434,979 + -0.1 435,213 + GFF3430 0.17 +0.4 435,213 + GFF3430 0.17 +0.8 435,213 + GFF3430 0.17 +0.9 435,214 - GFF3430 0.17 +0.2 435,251 - GFF3430 0.19 -0.7 435,298 - GFF3430 0.21 -0.5 435,461 - GFF3430 0.29 +0.2 435,461 - GFF3430 0.29 +0.5 435,491 + GFF3430 0.30 +1.3 435,524 - GFF3430 0.31 +0.3 435,524 - GFF3430 0.31 -0.2 435,583 + GFF3430 0.34 +0.4 435,614 + GFF3430 0.36 -0.3 435,615 - GFF3430 0.36 +0.5 435,638 - GFF3430 0.37 -0.3 435,678 - GFF3430 0.39 -0.6 435,770 + GFF3430 0.43 -1.0
Or see this region's nucleotide sequence