Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3274 and GFF3275 are separated by 23 nucleotides GFF3275 and GFF3276 are separated by 207 nucleotides
GFF3274 - Curved DNA-binding protein, at 260,930 to 261,874
GFF3274
GFF3275 - Chaperone modulatory protein CbpM, at 261,898 to 262,203
GFF3275
GFF3276 - hypothetical protein, at 262,411 to 263,811
GFF3276
Position (kb) 261
262
263 Strain fitness (log2 ratio) -2
-1
0
1
2 at 260.945 kb on + strand at 260.946 kb on - strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.948 kb on + strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.949 kb on - strand at 260.955 kb on + strand at 260.956 kb on - strand at 261.002 kb on + strand at 261.024 kb on - strand at 261.024 kb on - strand at 261.086 kb on + strand, within GFF3274 at 261.086 kb on + strand, within GFF3274 at 261.086 kb on + strand, within GFF3274 at 261.087 kb on - strand, within GFF3274 at 261.087 kb on - strand, within GFF3274 at 261.398 kb on + strand, within GFF3274 at 261.398 kb on + strand, within GFF3274 at 261.398 kb on + strand, within GFF3274 at 261.398 kb on + strand, within GFF3274 at 261.399 kb on - strand, within GFF3274 at 261.539 kb on + strand, within GFF3274 at 261.539 kb on + strand, within GFF3274 at 261.762 kb on - strand, within GFF3274 at 261.890 kb on - strand at 261.967 kb on + strand, within GFF3275 at 261.968 kb on - strand, within GFF3275 at 262.201 kb on + strand at 262.201 kb on + strand at 262.201 kb on + strand at 262.201 kb on + strand at 262.202 kb on - strand at 262.202 kb on - strand at 262.265 kb on + strand at 262.314 kb on - strand at 262.570 kb on - strand, within GFF3276 at 262.632 kb on + strand, within GFF3276 at 262.678 kb on + strand, within GFF3276 at 262.751 kb on - strand, within GFF3276 at 262.862 kb on - strand, within GFF3276 at 262.862 kb on - strand, within GFF3276 at 262.935 kb on + strand, within GFF3276 at 262.972 kb on + strand, within GFF3276 at 262.972 kb on + strand, within GFF3276 at 262.972 kb on + strand, within GFF3276 at 262.973 kb on - strand, within GFF3276 at 262.973 kb on - strand, within GFF3276 at 263.029 kb on + strand, within GFF3276 at 263.134 kb on + strand, within GFF3276 at 263.158 kb on + strand, within GFF3276 at 263.159 kb on - strand, within GFF3276
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 260,945 + +1.2 260,946 - -1.5 260,948 + +0.6 260,948 + -0.3 260,948 + -0.4 260,948 + -0.7 260,948 + +1.1 260,948 + -0.7 260,948 + -1.3 260,948 + -0.3 260,949 - -0.2 260,949 - +0.2 260,949 - -1.0 260,949 - -0.6 260,949 - -0.2 260,949 - -0.7 260,949 - -0.8 260,955 + +0.1 260,956 - -0.7 261,002 + +0.7 261,024 - -0.2 261,024 - +0.3 261,086 + GFF3274 0.17 -2.0 261,086 + GFF3274 0.17 +1.1 261,086 + GFF3274 0.17 -0.0 261,087 - GFF3274 0.17 -0.0 261,087 - GFF3274 0.17 -0.3 261,398 + GFF3274 0.50 -0.3 261,398 + GFF3274 0.50 +0.1 261,398 + GFF3274 0.50 +2.1 261,398 + GFF3274 0.50 +0.8 261,399 - GFF3274 0.50 -0.9 261,539 + GFF3274 0.64 -0.8 261,539 + GFF3274 0.64 +1.5 261,762 - GFF3274 0.88 -0.1 261,890 - -0.8 261,967 + GFF3275 0.23 +1.2 261,968 - GFF3275 0.23 -0.4 262,201 + -0.6 262,201 + +0.5 262,201 + -0.9 262,201 + -2.2 262,202 - +1.1 262,202 - -2.1 262,265 + +0.1 262,314 - +2.0 262,570 - GFF3276 0.11 -0.1 262,632 + GFF3276 0.16 -0.3 262,678 + GFF3276 0.19 -2.7 262,751 - GFF3276 0.24 -0.7 262,862 - GFF3276 0.32 -1.2 262,862 - GFF3276 0.32 +0.5 262,935 + GFF3276 0.37 +1.1 262,972 + GFF3276 0.40 +0.0 262,972 + GFF3276 0.40 -0.1 262,972 + GFF3276 0.40 -0.4 262,973 - GFF3276 0.40 -0.3 262,973 - GFF3276 0.40 -2.2 263,029 + GFF3276 0.44 -0.6 263,134 + GFF3276 0.52 -0.4 263,158 + GFF3276 0.53 -0.1 263,159 - GFF3276 0.53 +0.7
Or see this region's nucleotide sequence