Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3027 and GFF3028 are separated by 124 nucleotides GFF3028 and GFF3029 overlap by 4 nucleotides GFF3029 and GFF3030 are separated by 396 nucleotides GFF3030 and GFF3031 are separated by 156 nucleotides
GFF3027 - hypothetical protein, at 429,695 to 430,291
GFF3027
GFF3028 - hypothetical protein, at 430,416 to 430,673
GFF3028
GFF3029 - hypothetical protein, at 430,670 to 430,882
GFF3029
GFF3030 - hypothetical protein, at 431,279 to 431,458
GFF3030
GFF3031 - 6-phosphogluconolactonase, at 431,615 to 432,790
GFF3031
Position (kb) 431
432 Strain fitness (log2 ratio) -1
0
1 at 430.289 kb on + strand at 430.289 kb on + strand at 430.289 kb on + strand at 430.289 kb on + strand at 430.289 kb on + strand at 430.289 kb on + strand at 430.290 kb on - strand at 430.290 kb on - strand at 430.566 kb on + strand, within GFF3028 at 430.566 kb on + strand, within GFF3028 at 430.996 kb on + strand at 430.996 kb on + strand at 430.997 kb on - strand at 431.018 kb on + strand at 431.018 kb on + strand at 431.041 kb on + strand at 431.041 kb on + strand at 431.041 kb on + strand at 431.195 kb on - strand at 431.334 kb on + strand, within GFF3030 at 431.334 kb on + strand, within GFF3030 at 431.346 kb on + strand, within GFF3030 at 431.346 kb on + strand, within GFF3030 at 431.346 kb on + strand, within GFF3030 at 431.346 kb on + strand, within GFF3030 at 431.346 kb on + strand, within GFF3030 at 431.347 kb on - strand, within GFF3030 at 431.449 kb on + strand at 431.450 kb on - strand at 431.450 kb on - strand at 431.450 kb on - strand at 431.450 kb on - strand at 431.550 kb on + strand at 431.575 kb on + strand at 431.575 kb on + strand at 431.575 kb on + strand at 431.576 kb on - strand at 431.576 kb on - strand at 431.576 kb on - strand at 431.578 kb on + strand at 431.578 kb on + strand at 431.856 kb on - strand, within GFF3031 at 431.987 kb on + strand, within GFF3031 at 432.000 kb on + strand, within GFF3031 at 432.001 kb on - strand, within GFF3031 at 432.001 kb on - strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.159 kb on + strand, within GFF3031 at 432.160 kb on - strand, within GFF3031 at 432.160 kb on - strand, within GFF3031 at 432.165 kb on + strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.166 kb on - strand, within GFF3031 at 432.207 kb on + strand, within GFF3031 at 432.207 kb on + strand, within GFF3031 at 432.208 kb on - strand, within GFF3031 at 432.375 kb on + strand, within GFF3031
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 430,289 + +0.5 430,289 + +0.0 430,289 + -0.3 430,289 + -0.6 430,289 + +0.2 430,289 + -0.7 430,290 - -0.2 430,290 - -0.8 430,566 + GFF3028 0.58 +0.2 430,566 + GFF3028 0.58 +0.3 430,996 + +0.1 430,996 + +0.0 430,997 - -0.9 431,018 + +0.1 431,018 + -1.7 431,041 + -0.2 431,041 + -1.2 431,041 + -1.3 431,195 - -1.2 431,334 + GFF3030 0.31 -0.1 431,334 + GFF3030 0.31 +0.4 431,346 + GFF3030 0.37 -0.2 431,346 + GFF3030 0.37 -0.2 431,346 + GFF3030 0.37 +1.2 431,346 + GFF3030 0.37 +1.0 431,346 + GFF3030 0.37 +0.5 431,347 - GFF3030 0.38 +0.9 431,449 + +1.3 431,450 - -0.7 431,450 - -0.2 431,450 - -1.2 431,450 - +1.0 431,550 + -1.3 431,575 + -0.6 431,575 + +0.2 431,575 + +1.0 431,576 - -0.4 431,576 - -0.6 431,576 - -0.2 431,578 + +0.5 431,578 + -0.8 431,856 - GFF3031 0.20 +1.2 431,987 + GFF3031 0.32 -0.1 432,000 + GFF3031 0.33 -0.2 432,001 - GFF3031 0.33 -0.9 432,001 - GFF3031 0.33 +0.0 432,159 + GFF3031 0.46 -0.1 432,159 + GFF3031 0.46 +0.4 432,159 + GFF3031 0.46 +0.1 432,160 - GFF3031 0.46 -0.7 432,160 - GFF3031 0.46 +0.2 432,165 + GFF3031 0.47 -0.4 432,166 - GFF3031 0.47 +1.3 432,166 - GFF3031 0.47 +1.0 432,166 - GFF3031 0.47 +0.4 432,166 - GFF3031 0.47 -1.1 432,166 - GFF3031 0.47 -0.4 432,166 - GFF3031 0.47 +1.6 432,166 - GFF3031 0.47 -0.5 432,207 + GFF3031 0.50 -1.1 432,207 + GFF3031 0.50 -0.5 432,208 - GFF3031 0.50 -0.9 432,375 + GFF3031 0.65 +0.7
Or see this region's nucleotide sequence