Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2960 and GFF2961 are separated by 155 nucleotides GFF2961 and GFF2962 are separated by 67 nucleotides GFF2962 and GFF2963 are separated by 328 nucleotides GFF2963 and GFF2964 are separated by 470 nucleotides GFF2964 and GFF2965 are separated by 97 nucleotides
GFF2960 - hypothetical protein, at 333,753 to 334,790
GFF2960
GFF2961 - hypothetical protein, at 334,946 to 335,176
GFF2961
GFF2962 - hypothetical protein, at 335,244 to 335,411
GFF2962
GFF2963 - hypothetical protein, at 335,740 to 335,916
GFF2963
GFF2964 - Glucose starvation-inducible protein B, at 336,387 to 336,737
GFF2964
GFF2965 - ATP-dependent Clp protease proteolytic subunit, at 336,835 to 337,386
GFF2965
Position (kb) 335
336 Strain fitness (log2 ratio) -2
-1
0
1
2 at 334.774 kb on + strand at 334.775 kb on - strand at 334.775 kb on - strand at 334.800 kb on + strand at 334.813 kb on + strand at 334.813 kb on + strand at 334.814 kb on - strand at 334.814 kb on - strand at 334.814 kb on - strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.871 kb on + strand at 334.872 kb on - strand at 334.872 kb on - strand at 334.872 kb on - strand at 334.872 kb on - strand at 334.872 kb on - strand at 334.873 kb on + strand at 334.873 kb on + strand at 334.874 kb on - strand at 334.874 kb on - strand at 334.874 kb on - strand at 334.874 kb on - strand at 335.175 kb on - strand at 335.186 kb on + strand at 335.187 kb on - strand at 335.228 kb on + strand at 335.262 kb on - strand, within GFF2962 at 335.428 kb on + strand at 335.429 kb on - strand at 335.432 kb on + strand at 335.432 kb on + strand at 335.432 kb on + strand at 335.433 kb on - strand at 335.433 kb on - strand at 335.433 kb on - strand at 335.433 kb on - strand at 335.434 kb on + strand at 335.434 kb on + strand at 335.434 kb on + strand at 335.435 kb on - strand at 335.435 kb on - strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.436 kb on + strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.437 kb on - strand at 335.440 kb on + strand at 335.441 kb on - strand at 335.441 kb on - strand at 335.441 kb on - strand at 335.446 kb on + strand at 335.599 kb on - strand at 335.599 kb on - strand at 335.600 kb on + strand at 335.678 kb on + strand at 335.678 kb on + strand at 335.678 kb on + strand at 335.679 kb on - strand at 335.679 kb on - strand at 335.704 kb on - strand at 335.707 kb on + strand at 335.736 kb on + strand at 335.736 kb on + strand at 335.736 kb on + strand at 335.736 kb on + strand at 335.737 kb on - strand at 335.754 kb on + strand at 335.766 kb on + strand, within GFF2963 at 335.767 kb on - strand, within GFF2963 at 335.969 kb on + strand at 335.969 kb on + strand at 335.970 kb on - strand at 336.034 kb on + strand at 336.034 kb on + strand at 336.151 kb on + strand at 336.201 kb on + strand at 336.229 kb on + strand at 336.243 kb on - strand at 336.329 kb on + strand at 336.329 kb on + strand at 336.399 kb on - strand at 336.399 kb on - strand at 336.481 kb on - strand, within GFF2964 at 336.497 kb on + strand, within GFF2964 at 336.792 kb on + strand at 336.793 kb on - strand at 336.798 kb on + strand at 336.798 kb on + strand at 336.798 kb on + strand at 336.798 kb on + strand at 336.798 kb on + strand at 336.798 kb on + strand at 336.799 kb on - strand at 336.799 kb on - strand at 336.799 kb on - strand at 336.799 kb on - strand at 336.799 kb on - strand at 336.806 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 334,774 + -0.3 334,775 - -1.3 334,775 - -1.4 334,800 + +0.5 334,813 + +0.9 334,813 + -0.4 334,814 - +2.0 334,814 - -1.3 334,814 - +0.5 334,871 + -1.2 334,871 + +1.4 334,871 + -1.0 334,871 + -0.8 334,871 + -1.2 334,871 + +0.1 334,871 + +0.3 334,871 + +1.0 334,872 - +1.3 334,872 - -1.6 334,872 - -0.4 334,872 - -0.2 334,872 - -0.2 334,873 + +0.5 334,873 + +0.3 334,874 - +0.7 334,874 - -0.3 334,874 - +0.1 334,874 - -0.6 335,175 - +0.9 335,186 + -1.2 335,187 - -0.3 335,228 + -0.9 335,262 - GFF2962 0.11 -1.9 335,428 + -1.0 335,429 - -0.7 335,432 + -1.6 335,432 + -0.4 335,432 + -0.9 335,433 - -0.9 335,433 - +0.9 335,433 - -1.0 335,433 - -0.9 335,434 + -0.9 335,434 + +0.3 335,434 + -0.5 335,435 - +0.9 335,435 - -1.7 335,436 + +0.2 335,436 + -0.9 335,436 + -0.1 335,436 + +1.1 335,436 + -0.5 335,436 + +1.0 335,436 + +1.3 335,437 - -1.9 335,437 - +0.1 335,437 - -0.1 335,437 - -0.2 335,437 - +0.0 335,437 - -0.4 335,437 - +0.4 335,440 + +1.1 335,441 - -1.6 335,441 - +1.1 335,441 - +1.8 335,446 + -0.1 335,599 - -0.2 335,599 - +1.1 335,600 + +0.2 335,678 + +0.2 335,678 + +0.9 335,678 + -0.6 335,679 - +0.1 335,679 - +1.9 335,704 - +0.8 335,707 + +0.6 335,736 + +0.4 335,736 + +0.2 335,736 + -0.0 335,736 + +0.0 335,737 - -0.1 335,754 + -0.3 335,766 + GFF2963 0.15 +0.4 335,767 - GFF2963 0.15 +0.4 335,969 + -0.1 335,969 + -0.1 335,970 - +0.5 336,034 + -0.2 336,034 + -0.2 336,151 + +0.6 336,201 + -1.0 336,229 + -0.4 336,243 - -0.5 336,329 + +0.0 336,329 + +0.4 336,399 - -0.2 336,399 - +0.3 336,481 - GFF2964 0.27 -0.2 336,497 + GFF2964 0.31 -1.6 336,792 + +0.0 336,793 - -0.3 336,798 + -0.3 336,798 + -0.9 336,798 + -0.0 336,798 + -1.1 336,798 + -1.5 336,798 + -0.3 336,799 - +0.2 336,799 - +0.7 336,799 - -0.2 336,799 - -0.1 336,799 - +0.4 336,806 - +0.8
Or see this region's nucleotide sequence