Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2927 and GFF2928 are separated by 14 nucleotides GFF2928 and GFF2929 are separated by 143 nucleotides
GFF2927 - Putative tartrate transporter, at 299,404 to 300,702
GFF2927
GFF2928 - Glyoxylate/hydroxypyruvate reductase B, at 300,717 to 301,685
GFF2928
GFF2929 - Arginine--pyruvate transaminase AruH, at 301,829 to 303,016
GFF2929
Position (kb) 300
301
302 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 299.779 kb on + strand, within GFF2927 at 299.779 kb on + strand, within GFF2927 at 299.780 kb on - strand, within GFF2927 at 299.780 kb on - strand, within GFF2927 at 299.780 kb on - strand, within GFF2927 at 299.780 kb on - strand, within GFF2927 at 299.780 kb on - strand, within GFF2927 at 299.882 kb on - strand, within GFF2927 at 299.952 kb on + strand, within GFF2927 at 300.145 kb on + strand, within GFF2927 at 300.349 kb on + strand, within GFF2927 at 300.349 kb on + strand, within GFF2927 at 300.350 kb on - strand, within GFF2927 at 300.383 kb on - strand, within GFF2927 at 300.415 kb on + strand, within GFF2927 at 300.415 kb on + strand, within GFF2927 at 300.416 kb on - strand, within GFF2927 at 300.533 kb on - strand, within GFF2927 at 300.545 kb on - strand, within GFF2927 at 300.580 kb on + strand at 300.580 kb on + strand at 300.580 kb on + strand at 300.580 kb on + strand at 300.581 kb on - strand at 300.584 kb on + strand at 300.584 kb on + strand at 300.585 kb on - strand at 300.585 kb on - strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.738 kb on + strand at 300.739 kb on - strand at 300.791 kb on - strand at 300.791 kb on - strand at 300.954 kb on + strand, within GFF2928 at 300.954 kb on + strand, within GFF2928 at 300.954 kb on + strand, within GFF2928 at 300.955 kb on - strand, within GFF2928 at 300.955 kb on - strand, within GFF2928 at 301.236 kb on + strand, within GFF2928 at 301.236 kb on + strand, within GFF2928 at 301.237 kb on - strand, within GFF2928 at 301.237 kb on - strand, within GFF2928 at 301.237 kb on - strand, within GFF2928 at 301.237 kb on - strand, within GFF2928 at 301.287 kb on + strand, within GFF2928 at 301.418 kb on + strand, within GFF2928 at 301.418 kb on + strand, within GFF2928 at 301.418 kb on + strand, within GFF2928 at 301.418 kb on + strand, within GFF2928 at 301.764 kb on - strand at 302.094 kb on + strand, within GFF2929 at 302.094 kb on + strand, within GFF2929 at 302.094 kb on + strand, within GFF2929 at 302.095 kb on - strand, within GFF2929 at 302.131 kb on - strand, within GFF2929 at 302.131 kb on - strand, within GFF2929 at 302.382 kb on + strand, within GFF2929 at 302.383 kb on - strand, within GFF2929 at 302.385 kb on - strand, within GFF2929 at 302.385 kb on - strand, within GFF2929 at 302.397 kb on + strand, within GFF2929 at 302.397 kb on + strand, within GFF2929 at 302.397 kb on + strand, within GFF2929 at 302.398 kb on - strand, within GFF2929 at 302.398 kb on - strand, within GFF2929 at 302.597 kb on + strand, within GFF2929 at 302.597 kb on + strand, within GFF2929 at 302.598 kb on - strand, within GFF2929 at 302.598 kb on - strand, within GFF2929 at 302.598 kb on - strand, within GFF2929 at 302.631 kb on + strand, within GFF2929 at 302.631 kb on + strand, within GFF2929 at 302.632 kb on - strand, within GFF2929 at 302.632 kb on - strand, within GFF2929 at 302.636 kb on - strand, within GFF2929 at 302.636 kb on - strand, within GFF2929 at 302.640 kb on + strand, within GFF2929 at 302.640 kb on + strand, within GFF2929 at 302.640 kb on + strand, within GFF2929 at 302.640 kb on + strand, within GFF2929 at 302.641 kb on - strand, within GFF2929
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 299,779 + GFF2927 0.29 +0.8 299,779 + GFF2927 0.29 +0.4 299,780 - GFF2927 0.29 +0.5 299,780 - GFF2927 0.29 +0.5 299,780 - GFF2927 0.29 -0.5 299,780 - GFF2927 0.29 +1.0 299,780 - GFF2927 0.29 +0.4 299,882 - GFF2927 0.37 +0.6 299,952 + GFF2927 0.42 -0.0 300,145 + GFF2927 0.57 +0.4 300,349 + GFF2927 0.73 +0.1 300,349 + GFF2927 0.73 +0.0 300,350 - GFF2927 0.73 -0.7 300,383 - GFF2927 0.75 -0.3 300,415 + GFF2927 0.78 -0.4 300,415 + GFF2927 0.78 -0.9 300,416 - GFF2927 0.78 +0.7 300,533 - GFF2927 0.87 +0.1 300,545 - GFF2927 0.88 +0.2 300,580 + +0.3 300,580 + +0.0 300,580 + -0.4 300,580 + -2.0 300,581 - -1.3 300,584 + -0.5 300,584 + +0.3 300,585 - -0.7 300,585 - +0.2 300,738 + -3.5 300,738 + -0.9 300,738 + -1.4 300,738 + -2.3 300,739 - -1.3 300,791 - -0.7 300,791 - -1.9 300,954 + GFF2928 0.24 -1.5 300,954 + GFF2928 0.24 -1.8 300,954 + GFF2928 0.24 -0.1 300,955 - GFF2928 0.25 +0.5 300,955 - GFF2928 0.25 +0.4 301,236 + GFF2928 0.54 -0.2 301,236 + GFF2928 0.54 -2.0 301,237 - GFF2928 0.54 -1.7 301,237 - GFF2928 0.54 -1.6 301,237 - GFF2928 0.54 +0.1 301,237 - GFF2928 0.54 -1.2 301,287 + GFF2928 0.59 -0.9 301,418 + GFF2928 0.72 -1.4 301,418 + GFF2928 0.72 -1.7 301,418 + GFF2928 0.72 +0.7 301,418 + GFF2928 0.72 -2.2 301,764 - -1.0 302,094 + GFF2929 0.22 +0.2 302,094 + GFF2929 0.22 +0.1 302,094 + GFF2929 0.22 +0.0 302,095 - GFF2929 0.22 +0.2 302,131 - GFF2929 0.25 +0.2 302,131 - GFF2929 0.25 -0.6 302,382 + GFF2929 0.47 +0.3 302,383 - GFF2929 0.47 +0.0 302,385 - GFF2929 0.47 -0.6 302,385 - GFF2929 0.47 +0.7 302,397 + GFF2929 0.48 -0.3 302,397 + GFF2929 0.48 +1.4 302,397 + GFF2929 0.48 +0.8 302,398 - GFF2929 0.48 -0.3 302,398 - GFF2929 0.48 -1.0 302,597 + GFF2929 0.65 -0.1 302,597 + GFF2929 0.65 -0.8 302,598 - GFF2929 0.65 -0.3 302,598 - GFF2929 0.65 -0.1 302,598 - GFF2929 0.65 -0.4 302,631 + GFF2929 0.68 -0.2 302,631 + GFF2929 0.68 +0.4 302,632 - GFF2929 0.68 +1.0 302,632 - GFF2929 0.68 -1.0 302,636 - GFF2929 0.68 -0.5 302,636 - GFF2929 0.68 -2.2 302,640 + GFF2929 0.68 +0.0 302,640 + GFF2929 0.68 +0.0 302,640 + GFF2929 0.68 -0.7 302,640 + GFF2929 0.68 -1.1 302,641 - GFF2929 0.68 -0.8
Or see this region's nucleotide sequence