Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF27 and GFF28 are separated by 333 nucleotides GFF28 and GFF29 are separated by 84 nucleotides
GFF27 - Spermidine/putrescine import ATP-binding protein PotA, at 26,821 to 27,945
GFF27
GFF28 - Response regulator UvrY, at 28,279 to 28,908
GFF28
GFF29 - Membrane-bound lytic murein transglycosylase F, at 28,993 to 31,389
GFF29
Position (kb) 28
29 Strain fitness (log2 ratio) -2
-1
0
1 at 27.344 kb on + strand, within GFF27 at 27.345 kb on - strand, within GFF27 at 27.345 kb on - strand, within GFF27 at 27.659 kb on + strand, within GFF27 at 27.660 kb on - strand, within GFF27 at 27.660 kb on - strand, within GFF27 at 27.660 kb on - strand, within GFF27 at 27.814 kb on - strand, within GFF27 at 27.875 kb on + strand at 27.876 kb on - strand at 27.876 kb on - strand at 27.876 kb on - strand at 27.930 kb on + strand at 27.930 kb on + strand at 27.931 kb on - strand at 27.987 kb on + strand at 27.988 kb on - strand at 28.036 kb on - strand at 28.125 kb on + strand at 28.128 kb on + strand at 28.128 kb on + strand at 28.129 kb on - strand at 28.151 kb on - strand at 28.158 kb on - strand at 28.231 kb on + strand at 28.232 kb on - strand at 28.304 kb on + strand at 28.304 kb on + strand at 28.304 kb on + strand at 28.305 kb on - strand at 28.305 kb on - strand at 28.305 kb on - strand at 28.305 kb on - strand at 28.305 kb on - strand at 28.384 kb on - strand, within GFF28 at 28.607 kb on + strand, within GFF28 at 28.897 kb on + strand at 28.897 kb on + strand at 28.897 kb on + strand at 28.898 kb on - strand at 28.930 kb on - strand at 29.326 kb on + strand, within GFF29 at 29.326 kb on + strand, within GFF29 at 29.326 kb on + strand, within GFF29 at 29.327 kb on - strand, within GFF29 at 29.327 kb on - strand, within GFF29 at 29.327 kb on - strand, within GFF29 at 29.327 kb on - strand, within GFF29 at 29.437 kb on + strand, within GFF29 at 29.437 kb on + strand, within GFF29 at 29.437 kb on + strand, within GFF29 at 29.437 kb on + strand, within GFF29 at 29.438 kb on - strand, within GFF29 at 29.438 kb on - strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.711 kb on + strand, within GFF29 at 29.712 kb on - strand, within GFF29
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 27,344 + GFF27 0.46 -0.2 27,345 - GFF27 0.47 +0.1 27,345 - GFF27 0.47 +0.9 27,659 + GFF27 0.74 -0.7 27,660 - GFF27 0.75 -1.5 27,660 - GFF27 0.75 -0.0 27,660 - GFF27 0.75 -0.9 27,814 - GFF27 0.88 +0.5 27,875 + -0.7 27,876 - -0.2 27,876 - -1.3 27,876 - -0.5 27,930 + -1.0 27,930 + +0.3 27,931 - -0.7 27,987 + -0.3 27,988 - -0.5 28,036 - +0.2 28,125 + -1.7 28,128 + -0.2 28,128 + -0.4 28,129 - -0.1 28,151 - +0.2 28,158 - -0.5 28,231 + +1.4 28,232 - -1.9 28,304 + +0.6 28,304 + +1.6 28,304 + +0.3 28,305 - +0.0 28,305 - +0.4 28,305 - -0.3 28,305 - +0.3 28,305 - -1.1 28,384 - GFF28 0.17 -0.3 28,607 + GFF28 0.52 +1.3 28,897 + +0.2 28,897 + -1.0 28,897 + +0.9 28,898 - -1.0 28,930 - -1.0 29,326 + GFF29 0.14 -1.9 29,326 + GFF29 0.14 -0.5 29,326 + GFF29 0.14 +0.5 29,327 - GFF29 0.14 +1.5 29,327 - GFF29 0.14 -0.6 29,327 - GFF29 0.14 -1.0 29,327 - GFF29 0.14 -0.3 29,437 + GFF29 0.19 +0.5 29,437 + GFF29 0.19 +0.9 29,437 + GFF29 0.19 -1.0 29,437 + GFF29 0.19 +0.3 29,438 - GFF29 0.19 -1.3 29,438 - GFF29 0.19 -0.1 29,711 + GFF29 0.30 +0.6 29,711 + GFF29 0.30 -0.8 29,711 + GFF29 0.30 -0.2 29,711 + GFF29 0.30 -1.8 29,711 + GFF29 0.30 -0.1 29,711 + GFF29 0.30 +0.9 29,712 - GFF29 0.30 -1.2
Or see this region's nucleotide sequence