Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2657 and GFF2658 are separated by 70 nucleotides GFF2658 and GFF2659 are separated by 56 nucleotides GFF2659 and GFF2660 are separated by 221 nucleotides GFF2660 and GFF2661 are separated by 86 nucleotides GFF2661 and GFF2662 are separated by 46 nucleotides GFF2662 and GFF2663 are separated by 135 nucleotides
GFF2657 - Protein UmuC, at 456,593 to 457,873
GFF2657
GFF2658 - hypothetical protein, at 457,944 to 458,264
GFF2658
GFF2659 - hypothetical protein, at 458,321 to 458,599
GFF2659
GFF2660 - hypothetical protein, at 458,821 to 459,009
GFF2660
GFF2661 - hypothetical protein, at 459,096 to 459,263
GFF2661
GFF2662 - hypothetical protein, at 459,310 to 459,681
GFF2662
GFF2663 - hypothetical protein, at 459,817 to 460,236
GFF2663
Position (kb) 458
459
460 Strain fitness (log2 ratio) -1
0
1
2 at 457.832 kb on - strand at 457.862 kb on - strand at 457.929 kb on - strand at 458.045 kb on + strand, within GFF2658 at 458.105 kb on + strand, within GFF2658 at 458.105 kb on + strand, within GFF2658 at 458.106 kb on - strand, within GFF2658 at 458.266 kb on + strand at 458.273 kb on - strand at 458.361 kb on + strand, within GFF2659 at 458.361 kb on + strand, within GFF2659 at 458.361 kb on + strand, within GFF2659 at 458.361 kb on + strand, within GFF2659 at 458.361 kb on + strand, within GFF2659 at 458.362 kb on - strand, within GFF2659 at 458.374 kb on + strand, within GFF2659 at 458.375 kb on - strand, within GFF2659 at 458.440 kb on - strand, within GFF2659 at 458.475 kb on + strand, within GFF2659 at 458.476 kb on - strand, within GFF2659 at 458.476 kb on - strand, within GFF2659 at 458.565 kb on - strand, within GFF2659 at 458.623 kb on + strand at 458.624 kb on - strand at 458.624 kb on - strand at 458.624 kb on - strand at 458.739 kb on + strand at 458.739 kb on + strand at 458.740 kb on - strand at 458.740 kb on - strand at 458.764 kb on + strand at 458.764 kb on + strand at 458.820 kb on + strand at 458.820 kb on + strand at 458.820 kb on + strand at 458.820 kb on + strand at 458.820 kb on + strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.821 kb on - strand at 458.835 kb on + strand at 458.896 kb on + strand, within GFF2660 at 458.896 kb on + strand, within GFF2660 at 458.897 kb on - strand, within GFF2660 at 459.080 kb on + strand at 459.081 kb on - strand at 459.081 kb on - strand at 459.081 kb on - strand at 459.081 kb on - strand at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.122 kb on + strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.123 kb on - strand, within GFF2661 at 459.192 kb on + strand, within GFF2661 at 459.193 kb on - strand, within GFF2661 at 459.264 kb on + strand at 459.264 kb on + strand at 459.265 kb on - strand at 459.265 kb on - strand at 459.265 kb on - strand at 459.293 kb on + strand at 459.294 kb on - strand at 459.294 kb on - strand at 459.317 kb on + strand at 459.317 kb on + strand at 459.768 kb on + strand at 459.768 kb on + strand at 459.816 kb on + strand at 459.816 kb on + strand at 459.817 kb on - strand at 459.817 kb on - strand at 459.817 kb on - strand at 459.830 kb on + strand at 459.830 kb on + strand at 459.831 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 457,832 - +0.6 457,862 - +1.5 457,929 - -1.3 458,045 + GFF2658 0.31 -0.1 458,105 + GFF2658 0.50 -0.9 458,105 + GFF2658 0.50 +0.3 458,106 - GFF2658 0.50 -0.1 458,266 + -1.4 458,273 - -0.3 458,361 + GFF2659 0.14 -0.5 458,361 + GFF2659 0.14 +2.0 458,361 + GFF2659 0.14 -0.3 458,361 + GFF2659 0.14 -1.0 458,361 + GFF2659 0.14 +0.8 458,362 - GFF2659 0.15 -0.1 458,374 + GFF2659 0.19 -1.2 458,375 - GFF2659 0.19 +0.7 458,440 - GFF2659 0.43 -0.1 458,475 + GFF2659 0.55 -0.5 458,476 - GFF2659 0.56 +0.8 458,476 - GFF2659 0.56 +0.3 458,565 - GFF2659 0.87 +0.8 458,623 + -0.4 458,624 - +0.2 458,624 - +0.5 458,624 - +1.4 458,739 + +0.3 458,739 + -1.3 458,740 - +0.1 458,740 - +0.8 458,764 + -0.4 458,764 + -0.5 458,820 + +0.6 458,820 + -0.5 458,820 + -1.0 458,820 + -0.7 458,820 + +0.8 458,821 - -0.6 458,821 - +0.1 458,821 - -0.1 458,821 - +0.1 458,821 - +0.4 458,821 - +0.1 458,821 - +1.2 458,835 + -0.8 458,896 + GFF2660 0.40 +0.3 458,896 + GFF2660 0.40 -0.1 458,897 - GFF2660 0.40 +0.8 459,080 + -0.7 459,081 - +0.4 459,081 - +0.0 459,081 - -0.6 459,081 - +0.4 459,122 + GFF2661 0.15 +0.1 459,122 + GFF2661 0.15 +2.7 459,122 + GFF2661 0.15 -0.9 459,122 + GFF2661 0.15 -0.1 459,122 + GFF2661 0.15 -0.6 459,122 + GFF2661 0.15 -1.0 459,122 + GFF2661 0.15 -0.0 459,123 - GFF2661 0.16 -0.0 459,123 - GFF2661 0.16 +1.6 459,123 - GFF2661 0.16 +0.8 459,123 - GFF2661 0.16 -0.1 459,123 - GFF2661 0.16 +0.1 459,123 - GFF2661 0.16 -0.1 459,123 - GFF2661 0.16 -0.4 459,123 - GFF2661 0.16 +1.1 459,123 - GFF2661 0.16 +0.1 459,123 - GFF2661 0.16 -0.7 459,123 - GFF2661 0.16 -0.2 459,192 + GFF2661 0.57 -0.5 459,193 - GFF2661 0.58 -0.4 459,264 + -0.1 459,264 + +0.9 459,265 - -0.3 459,265 - -0.3 459,265 - +1.0 459,293 + +0.2 459,294 - +0.3 459,294 - -0.8 459,317 + -0.5 459,317 + -0.2 459,768 + -0.0 459,768 + +0.9 459,816 + -0.5 459,816 + -0.8 459,817 - +1.8 459,817 - -0.1 459,817 - -0.1 459,830 + -0.1 459,830 + +0.8 459,831 - +0.4
Or see this region's nucleotide sequence