Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2639 and GFF2640 are separated by 80 nucleotides GFF2640 and GFF2641 are separated by 71 nucleotides GFF2641 and GFF2642 are separated by 241 nucleotides
GFF2639 - hypothetical protein, at 439,778 to 440,296
GFF2639
GFF2640 - hypothetical protein, at 440,377 to 440,907
GFF2640
GFF2641 - hypothetical protein, at 440,979 to 441,170
GFF2641
GFF2642 - Polyamine aminopropyltransferase, at 441,412 to 442,287
GFF2642
Position (kb) 440
441
442 Strain fitness (log2 ratio) -2
-1
0
1
2 at 439.985 kb on - strand, within GFF2639 at 440.175 kb on - strand, within GFF2639 at 440.295 kb on - strand at 440.295 kb on - strand at 440.473 kb on + strand, within GFF2640 at 440.518 kb on + strand, within GFF2640 at 440.518 kb on + strand, within GFF2640 at 440.519 kb on - strand, within GFF2640 at 440.602 kb on + strand, within GFF2640 at 440.602 kb on + strand, within GFF2640 at 440.602 kb on + strand, within GFF2640 at 440.603 kb on - strand, within GFF2640 at 440.603 kb on - strand, within GFF2640 at 440.709 kb on + strand, within GFF2640 at 440.710 kb on - strand, within GFF2640 at 440.710 kb on - strand, within GFF2640 at 440.752 kb on + strand, within GFF2640 at 440.809 kb on + strand, within GFF2640 at 440.892 kb on - strand at 440.947 kb on - strand at 440.963 kb on - strand at 441.042 kb on - strand, within GFF2641 at 441.289 kb on + strand at 441.289 kb on + strand at 441.343 kb on + strand at 441.343 kb on + strand at 441.343 kb on + strand at 441.344 kb on - strand at 441.344 kb on - strand at 441.344 kb on - strand at 441.344 kb on - strand at 441.344 kb on - strand at 441.344 kb on - strand at 441.605 kb on - strand, within GFF2642 at 441.605 kb on - strand, within GFF2642 at 441.687 kb on + strand, within GFF2642 at 441.687 kb on + strand, within GFF2642 at 441.802 kb on + strand, within GFF2642 at 441.802 kb on + strand, within GFF2642 at 441.940 kb on + strand, within GFF2642 at 441.941 kb on - strand, within GFF2642 at 442.093 kb on + strand, within GFF2642 at 442.094 kb on - strand, within GFF2642 at 442.094 kb on - strand, within GFF2642 at 442.094 kb on - strand, within GFF2642 at 442.141 kb on + strand, within GFF2642
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 439,985 - GFF2639 0.40 +0.6 440,175 - GFF2639 0.76 +0.1 440,295 - +0.5 440,295 - -1.3 440,473 + GFF2640 0.18 +0.8 440,518 + GFF2640 0.27 -0.4 440,518 + GFF2640 0.27 +0.8 440,519 - GFF2640 0.27 +0.2 440,602 + GFF2640 0.42 -0.1 440,602 + GFF2640 0.42 -0.9 440,602 + GFF2640 0.42 +1.1 440,603 - GFF2640 0.43 -0.1 440,603 - GFF2640 0.43 -0.8 440,709 + GFF2640 0.63 -1.1 440,710 - GFF2640 0.63 +1.0 440,710 - GFF2640 0.63 +0.1 440,752 + GFF2640 0.71 +0.0 440,809 + GFF2640 0.81 -0.8 440,892 - +0.5 440,947 - -0.2 440,963 - +2.2 441,042 - GFF2641 0.33 -0.8 441,289 + +0.3 441,289 + -1.1 441,343 + -0.7 441,343 + +0.7 441,343 + +0.1 441,344 - +0.0 441,344 - -1.4 441,344 - -1.6 441,344 - +0.9 441,344 - +0.1 441,344 - -0.1 441,605 - GFF2642 0.22 -0.8 441,605 - GFF2642 0.22 +1.1 441,687 + GFF2642 0.31 -1.2 441,687 + GFF2642 0.31 +0.2 441,802 + GFF2642 0.45 -0.2 441,802 + GFF2642 0.45 -1.2 441,940 + GFF2642 0.60 -0.1 441,941 - GFF2642 0.60 +0.1 442,093 + GFF2642 0.78 -2.6 442,094 - GFF2642 0.78 -2.5 442,094 - GFF2642 0.78 -0.5 442,094 - GFF2642 0.78 -0.9 442,141 + GFF2642 0.83 -1.5
Or see this region's nucleotide sequence