Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2624 and GFF2625 are separated by 142 nucleotides GFF2625 and GFF2626 are separated by 74 nucleotides GFF2626 and GFF2627 are separated by 131 nucleotides
GFF2624 - hypothetical protein, at 425,835 to 427,880
GFF2624
GFF2625 - putative DNA endonuclease SmrA, at 428,023 to 428,580
GFF2625
GFF2626 - hypothetical protein, at 428,655 to 428,975
GFF2626
GFF2627 - hypothetical protein, at 429,107 to 429,697
GFF2627
Position (kb) 428
429 Strain fitness (log2 ratio) -1
0
1 at 427.150 kb on - strand, within GFF2624 at 427.305 kb on - strand, within GFF2624 at 427.436 kb on + strand, within GFF2624 at 427.448 kb on + strand, within GFF2624 at 427.449 kb on - strand, within GFF2624 at 427.585 kb on + strand, within GFF2624 at 427.701 kb on + strand at 427.801 kb on + strand at 427.863 kb on - strand at 427.879 kb on - strand at 427.883 kb on - strand at 427.909 kb on + strand at 427.972 kb on - strand at 427.980 kb on - strand at 428.066 kb on + strand at 428.066 kb on + strand at 428.210 kb on - strand, within GFF2625 at 428.210 kb on - strand, within GFF2625 at 428.968 kb on - strand at 429.037 kb on + strand at 429.038 kb on - strand at 429.063 kb on + strand at 429.065 kb on + strand at 429.065 kb on + strand at 429.065 kb on + strand at 429.065 kb on + strand at 429.066 kb on - strand at 429.066 kb on - strand at 429.066 kb on - strand at 429.066 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 427,150 - GFF2624 0.64 +0.7 427,305 - GFF2624 0.72 -0.4 427,436 + GFF2624 0.78 +0.8 427,448 + GFF2624 0.79 -0.3 427,449 - GFF2624 0.79 -0.1 427,585 + GFF2624 0.86 -1.2 427,701 + -0.2 427,801 + +0.7 427,863 - -1.0 427,879 - +0.8 427,883 - +1.2 427,909 + -0.1 427,972 - -0.1 427,980 - +0.0 428,066 + -0.4 428,066 + +0.5 428,210 - GFF2625 0.34 +0.4 428,210 - GFF2625 0.34 +0.9 428,968 - -0.9 429,037 + -0.6 429,038 - +1.3 429,063 + -1.1 429,065 + +1.3 429,065 + -0.1 429,065 + -1.5 429,065 + -0.1 429,066 - +0.2 429,066 - -0.7 429,066 - +0.1 429,066 - +0.2
Or see this region's nucleotide sequence