Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2460 and GFF2461 are separated by 55 nucleotides GFF2461 and GFF2462 are separated by 18 nucleotides GFF2462 and GFF2463 overlap by 1 nucleotides GFF2463 and GFF2464 overlap by 4 nucleotides GFF2464 and GFF2465 are separated by 3 nucleotides
GFF2460 - Flagellar motor switch protein FliM, at 248,708 to 249,676
GFF2460
GFF2461 - Flagellar motor switch protein FliN, at 249,732 to 250,190
GFF2461
GFF2462 - hypothetical protein, at 250,209 to 250,643
GFF2462
GFF2463 - Flagellar biosynthetic protein FliP, at 250,643 to 251,401
GFF2463
GFF2464 - Flagellar biosynthetic protein FliQ, at 251,398 to 251,667
GFF2464
GFF2465 - Flagellar biosynthetic protein FliR, at 251,671 to 252,456
GFF2465
Position (kb) 250
251
252 Strain fitness (log2 ratio) -1
0
1
2 at 249.698 kb on - strand at 249.698 kb on - strand at 249.743 kb on + strand at 249.744 kb on - strand at 250.111 kb on + strand, within GFF2461 at 250.112 kb on - strand, within GFF2461 at 250.112 kb on - strand, within GFF2461 at 250.641 kb on + strand at 250.641 kb on + strand at 250.641 kb on + strand at 250.642 kb on - strand at 250.642 kb on - strand at 250.642 kb on - strand at 250.642 kb on - strand at 250.766 kb on + strand, within GFF2463 at 250.767 kb on - strand, within GFF2463 at 250.813 kb on + strand, within GFF2463 at 250.814 kb on - strand, within GFF2463 at 251.000 kb on + strand, within GFF2463 at 251.001 kb on - strand, within GFF2463 at 251.001 kb on - strand, within GFF2463 at 251.001 kb on - strand, within GFF2463 at 251.192 kb on - strand, within GFF2463 at 251.192 kb on - strand, within GFF2463 at 251.215 kb on + strand, within GFF2463 at 251.215 kb on + strand, within GFF2463 at 251.215 kb on + strand, within GFF2463 at 251.216 kb on - strand, within GFF2463 at 251.216 kb on - strand, within GFF2463 at 251.216 kb on - strand, within GFF2463 at 251.216 kb on - strand, within GFF2463 at 251.278 kb on + strand, within GFF2463 at 251.278 kb on + strand, within GFF2463 at 251.279 kb on - strand, within GFF2463 at 251.421 kb on + strand at 251.422 kb on - strand at 251.463 kb on + strand, within GFF2464 at 251.463 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.623 kb on + strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.624 kb on - strand, within GFF2464 at 251.638 kb on + strand, within GFF2464 at 251.813 kb on - strand, within GFF2465 at 251.813 kb on - strand, within GFF2465 at 251.813 kb on - strand, within GFF2465 at 251.813 kb on - strand, within GFF2465 at 252.184 kb on + strand, within GFF2465 at 252.184 kb on + strand, within GFF2465 at 252.185 kb on - strand, within GFF2465 at 252.185 kb on - strand, within GFF2465 at 252.266 kb on + strand, within GFF2465 at 252.267 kb on - strand, within GFF2465
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 249,698 - +0.5 249,698 - +0.4 249,743 + -0.6 249,744 - +0.8 250,111 + GFF2461 0.83 -0.1 250,112 - GFF2461 0.83 -1.3 250,112 - GFF2461 0.83 +0.7 250,641 + +0.5 250,641 + +1.1 250,641 + -0.5 250,642 - +0.3 250,642 - -0.1 250,642 - +0.9 250,642 - -0.7 250,766 + GFF2463 0.16 +0.3 250,767 - GFF2463 0.16 +0.5 250,813 + GFF2463 0.22 +0.5 250,814 - GFF2463 0.23 +0.3 251,000 + GFF2463 0.47 +0.8 251,001 - GFF2463 0.47 +0.8 251,001 - GFF2463 0.47 +0.6 251,001 - GFF2463 0.47 +1.0 251,192 - GFF2463 0.72 +0.8 251,192 - GFF2463 0.72 +0.8 251,215 + GFF2463 0.75 +1.3 251,215 + GFF2463 0.75 +0.7 251,215 + GFF2463 0.75 +0.8 251,216 - GFF2463 0.75 +0.3 251,216 - GFF2463 0.75 +2.2 251,216 - GFF2463 0.75 +0.6 251,216 - GFF2463 0.75 +0.5 251,278 + GFF2463 0.84 +1.4 251,278 + GFF2463 0.84 +1.0 251,279 - GFF2463 0.84 +1.0 251,421 + +0.8 251,422 - +0.8 251,463 + GFF2464 0.24 +0.8 251,463 + GFF2464 0.24 +1.1 251,623 + GFF2464 0.83 +1.1 251,623 + GFF2464 0.83 +1.1 251,623 + GFF2464 0.83 +0.8 251,623 + GFF2464 0.83 +0.5 251,623 + GFF2464 0.83 +0.4 251,623 + GFF2464 0.83 -0.1 251,623 + GFF2464 0.83 -0.1 251,623 + GFF2464 0.83 +1.3 251,624 - GFF2464 0.84 +0.2 251,624 - GFF2464 0.84 +1.2 251,624 - GFF2464 0.84 +2.1 251,624 - GFF2464 0.84 +0.4 251,624 - GFF2464 0.84 -0.0 251,624 - GFF2464 0.84 +0.7 251,638 + GFF2464 0.89 +0.3 251,813 - GFF2465 0.18 -0.2 251,813 - GFF2465 0.18 +0.0 251,813 - GFF2465 0.18 +0.8 251,813 - GFF2465 0.18 +0.7 252,184 + GFF2465 0.65 +1.4 252,184 + GFF2465 0.65 -0.2 252,185 - GFF2465 0.65 +1.1 252,185 - GFF2465 0.65 +1.1 252,266 + GFF2465 0.76 +0.4 252,267 - GFF2465 0.76 +0.5
Or see this region's nucleotide sequence