Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2306 and GFF2307 are separated by 177 nucleotides GFF2307 and GFF2308 overlap by 4 nucleotides
GFF2306 - PCP degradation transcriptional activation protein, at 82,643 to 83,578
GFF2306
GFF2307 - hypothetical protein, at 83,756 to 84,004
GFF2307
GFF2308 - putative transporter YycB, at 84,001 to 84,927
GFF2308
Position (kb) 83
84
85 Strain fitness (log2 ratio) -2
-1
0
1 at 82.814 kb on - strand, within GFF2306 at 82.872 kb on + strand, within GFF2306 at 82.872 kb on + strand, within GFF2306 at 82.873 kb on - strand, within GFF2306 at 82.892 kb on + strand, within GFF2306 at 82.892 kb on + strand, within GFF2306 at 82.892 kb on + strand, within GFF2306 at 82.893 kb on - strand, within GFF2306 at 83.251 kb on - strand, within GFF2306 at 83.251 kb on - strand, within GFF2306 at 83.358 kb on + strand, within GFF2306 at 83.358 kb on + strand, within GFF2306 at 83.359 kb on - strand, within GFF2306 at 83.377 kb on - strand, within GFF2306 at 83.377 kb on - strand, within GFF2306 at 83.451 kb on + strand, within GFF2306 at 83.452 kb on - strand, within GFF2306 at 83.452 kb on - strand, within GFF2306 at 83.452 kb on - strand, within GFF2306 at 83.514 kb on + strand at 83.514 kb on + strand at 83.528 kb on + strand at 83.528 kb on + strand at 83.529 kb on - strand at 83.529 kb on - strand at 83.529 kb on - strand at 83.566 kb on + strand at 83.566 kb on + strand at 83.567 kb on - strand at 83.567 kb on - strand at 83.630 kb on + strand at 83.670 kb on + strand at 83.671 kb on - strand at 83.708 kb on - strand at 83.922 kb on + strand, within GFF2307 at 83.937 kb on - strand, within GFF2307 at 83.937 kb on - strand, within GFF2307 at 83.937 kb on - strand, within GFF2307 at 84.047 kb on + strand at 84.245 kb on + strand, within GFF2308 at 84.245 kb on + strand, within GFF2308 at 84.245 kb on + strand, within GFF2308 at 84.245 kb on + strand, within GFF2308 at 84.248 kb on + strand, within GFF2308 at 84.248 kb on + strand, within GFF2308 at 84.278 kb on + strand, within GFF2308 at 84.364 kb on + strand, within GFF2308 at 84.518 kb on + strand, within GFF2308 at 84.518 kb on + strand, within GFF2308 at 84.533 kb on - strand, within GFF2308 at 84.533 kb on - strand, within GFF2308 at 84.533 kb on - strand, within GFF2308 at 84.595 kb on + strand, within GFF2308 at 84.595 kb on + strand, within GFF2308 at 84.596 kb on - strand, within GFF2308 at 84.811 kb on + strand, within GFF2308 at 84.812 kb on - strand, within GFF2308 at 84.812 kb on - strand, within GFF2308 at 84.813 kb on + strand, within GFF2308 at 84.813 kb on + strand, within GFF2308 at 84.871 kb on - strand at 84.871 kb on - strand at 84.871 kb on - strand at 84.959 kb on + strand at 84.959 kb on + strand at 84.960 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 82,814 - GFF2306 0.18 -2.0 82,872 + GFF2306 0.24 +0.6 82,872 + GFF2306 0.24 +0.9 82,873 - GFF2306 0.25 -0.4 82,892 + GFF2306 0.27 +1.2 82,892 + GFF2306 0.27 +0.2 82,892 + GFF2306 0.27 +0.4 82,893 - GFF2306 0.27 -1.0 83,251 - GFF2306 0.65 +1.6 83,251 - GFF2306 0.65 +0.1 83,358 + GFF2306 0.76 -1.7 83,358 + GFF2306 0.76 -1.2 83,359 - GFF2306 0.76 -0.5 83,377 - GFF2306 0.78 -0.0 83,377 - GFF2306 0.78 -0.4 83,451 + GFF2306 0.86 -0.4 83,452 - GFF2306 0.86 -0.0 83,452 - GFF2306 0.86 -1.0 83,452 - GFF2306 0.86 -0.7 83,514 + -0.2 83,514 + +0.3 83,528 + -0.1 83,528 + +0.8 83,529 - -0.6 83,529 - -0.7 83,529 - -0.2 83,566 + -1.5 83,566 + +0.2 83,567 - +0.8 83,567 - -0.0 83,630 + +0.0 83,670 + +0.6 83,671 - -0.1 83,708 - +0.8 83,922 + GFF2307 0.67 -1.7 83,937 - GFF2307 0.73 -0.9 83,937 - GFF2307 0.73 -0.1 83,937 - GFF2307 0.73 -1.4 84,047 + +1.1 84,245 + GFF2308 0.26 +1.1 84,245 + GFF2308 0.26 +0.1 84,245 + GFF2308 0.26 -1.6 84,245 + GFF2308 0.26 -0.4 84,248 + GFF2308 0.27 -1.2 84,248 + GFF2308 0.27 -0.7 84,278 + GFF2308 0.30 +0.2 84,364 + GFF2308 0.39 -0.4 84,518 + GFF2308 0.56 -0.4 84,518 + GFF2308 0.56 -1.5 84,533 - GFF2308 0.57 -0.1 84,533 - GFF2308 0.57 -0.4 84,533 - GFF2308 0.57 -1.7 84,595 + GFF2308 0.64 +0.7 84,595 + GFF2308 0.64 -0.6 84,596 - GFF2308 0.64 -0.4 84,811 + GFF2308 0.87 -1.3 84,812 - GFF2308 0.87 +0.1 84,812 - GFF2308 0.87 -0.5 84,813 + GFF2308 0.88 -1.1 84,813 + GFF2308 0.88 +0.2 84,871 - -0.2 84,871 - +0.4 84,871 - -0.2 84,959 + -0.3 84,959 + -0.0 84,960 - +1.0
Or see this region's nucleotide sequence