Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1904 and GFF1905 overlap by 11 nucleotides GFF1905 and GFF1906 are separated by 10 nucleotides GFF1906 and GFF1907 are separated by 244 nucleotides
GFF1904 - p-hydroxybenzoic acid efflux pump subunit AaeB, at 121,641 to 123,833
GFF1904
GFF1905 - Protein AaeX, at 123,823 to 124,023
GFF1905
GFF1906 - p-hydroxybenzoic acid efflux pump subunit AaeA, at 124,034 to 124,891
GFF1906
GFF1907 - hypothetical protein, at 125,136 to 125,873
GFF1907
Position (kb) 124
125 Strain fitness (log2 ratio) -2
-1
0
1 at 123.195 kb on + strand, within GFF1904 at 123.196 kb on + strand, within GFF1904 at 123.196 kb on - strand, within GFF1904 at 123.204 kb on + strand, within GFF1904 at 123.205 kb on - strand, within GFF1904 at 123.205 kb on - strand, within GFF1904 at 123.205 kb on - strand, within GFF1904 at 123.205 kb on - strand, within GFF1904 at 123.223 kb on - strand, within GFF1904 at 123.223 kb on - strand, within GFF1904 at 123.543 kb on + strand, within GFF1904 at 123.544 kb on - strand, within GFF1904 at 123.853 kb on + strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.854 kb on - strand, within GFF1905 at 123.982 kb on - strand, within GFF1905 at 123.982 kb on - strand, within GFF1905 at 123.982 kb on - strand, within GFF1905 at 123.982 kb on - strand, within GFF1905 at 123.982 kb on - strand, within GFF1905 at 124.015 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.115 kb on + strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.116 kb on - strand at 124.434 kb on - strand, within GFF1906 at 124.512 kb on - strand, within GFF1906 at 124.544 kb on + strand, within GFF1906 at 124.545 kb on - strand, within GFF1906 at 124.718 kb on + strand, within GFF1906 at 124.858 kb on + strand at 124.858 kb on + strand at 125.177 kb on + strand at 125.179 kb on + strand at 125.179 kb on + strand at 125.180 kb on - strand at 125.228 kb on + strand, within GFF1907 at 125.228 kb on + strand, within GFF1907 at 125.253 kb on - strand, within GFF1907 at 125.253 kb on - strand, within GFF1907 at 125.325 kb on + strand, within GFF1907 at 125.348 kb on + strand, within GFF1907 at 125.348 kb on + strand, within GFF1907 at 125.409 kb on - strand, within GFF1907 at 125.419 kb on + strand, within GFF1907 at 125.463 kb on + strand, within GFF1907 at 125.490 kb on + strand, within GFF1907 at 125.590 kb on - strand, within GFF1907 at 125.596 kb on - strand, within GFF1907 at 125.596 kb on - strand, within GFF1907 at 125.603 kb on + strand, within GFF1907 at 125.660 kb on - strand, within GFF1907 at 125.701 kb on + strand, within GFF1907 at 125.738 kb on + strand, within GFF1907 at 125.758 kb on - strand, within GFF1907 at 125.765 kb on - strand, within GFF1907 at 125.803 kb on + strand at 125.803 kb on + strand at 125.803 kb on + strand at 125.803 kb on + strand at 125.806 kb on - strand at 125.806 kb on - strand at 125.885 kb on + strand at 125.885 kb on + strand at 125.886 kb on - strand at 125.886 kb on - strand at 125.888 kb on + strand at 125.889 kb on - strand at 125.889 kb on - strand at 125.889 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 123,195 + GFF1904 0.71 -1.9 123,196 + GFF1904 0.71 -0.1 123,196 - GFF1904 0.71 -0.3 123,204 + GFF1904 0.71 -0.3 123,205 - GFF1904 0.71 +0.1 123,205 - GFF1904 0.71 -0.3 123,205 - GFF1904 0.71 +0.4 123,205 - GFF1904 0.71 -0.7 123,223 - GFF1904 0.72 -0.1 123,223 - GFF1904 0.72 -0.5 123,543 + GFF1904 0.87 -0.4 123,544 - GFF1904 0.87 -0.4 123,853 + GFF1905 0.15 +0.6 123,854 - GFF1905 0.15 -0.5 123,854 - GFF1905 0.15 +0.0 123,854 - GFF1905 0.15 -0.7 123,854 - GFF1905 0.15 +0.5 123,854 - GFF1905 0.15 +0.1 123,854 - GFF1905 0.15 -0.1 123,854 - GFF1905 0.15 +0.6 123,982 - GFF1905 0.79 +0.4 123,982 - GFF1905 0.79 +0.3 123,982 - GFF1905 0.79 +0.0 123,982 - GFF1905 0.79 +0.9 123,982 - GFF1905 0.79 -1.1 124,015 + +0.7 124,115 + -0.8 124,115 + +0.3 124,115 + +1.5 124,115 + +0.1 124,115 + +0.5 124,115 + +1.1 124,115 + +0.1 124,116 - +0.1 124,116 - -0.5 124,116 - +0.3 124,116 - -1.1 124,116 - -1.0 124,116 - -0.3 124,116 - -2.4 124,434 - GFF1906 0.47 +1.5 124,512 - GFF1906 0.56 -0.5 124,544 + GFF1906 0.59 +0.2 124,545 - GFF1906 0.60 +1.1 124,718 + GFF1906 0.80 +0.3 124,858 + -0.4 124,858 + +0.7 125,177 + +0.4 125,179 + -1.5 125,179 + +0.8 125,180 - -1.1 125,228 + GFF1907 0.12 +0.0 125,228 + GFF1907 0.12 -0.8 125,253 - GFF1907 0.16 +1.5 125,253 - GFF1907 0.16 +0.7 125,325 + GFF1907 0.26 +0.1 125,348 + GFF1907 0.29 +0.3 125,348 + GFF1907 0.29 -0.5 125,409 - GFF1907 0.37 +0.5 125,419 + GFF1907 0.38 +0.4 125,463 + GFF1907 0.44 -0.5 125,490 + GFF1907 0.48 +0.4 125,590 - GFF1907 0.62 -0.5 125,596 - GFF1907 0.62 -0.9 125,596 - GFF1907 0.62 +0.8 125,603 + GFF1907 0.63 +0.8 125,660 - GFF1907 0.71 -0.3 125,701 + GFF1907 0.77 -1.0 125,738 + GFF1907 0.82 -0.5 125,758 - GFF1907 0.84 -0.4 125,765 - GFF1907 0.85 -0.8 125,803 + -1.2 125,803 + -0.5 125,803 + +1.1 125,803 + +0.5 125,806 - -0.9 125,806 - -1.2 125,885 + -1.1 125,885 + -0.1 125,886 - -1.5 125,886 - -0.8 125,888 + +1.0 125,889 - +0.5 125,889 - -0.7 125,889 - -1.7
Or see this region's nucleotide sequence