Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF136 and GFF137 are separated by 88 nucleotides GFF137 and GFF138 are separated by 148 nucleotides
GFF136 - HTH-type transcriptional regulator BetI, at 156,484 to 157,077
GFF136
GFF137 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 157,166 to 158,638
GFF137
GFF138 - Oxygen-dependent choline dehydrogenase, at 158,787 to 160,490
GFF138
Position (kb) 157
158
159 Strain fitness (log2 ratio) -1
0
1
2 at 156.192 kb on + strand at 156.339 kb on + strand at 156.468 kb on + strand at 156.468 kb on + strand at 156.469 kb on - strand at 156.499 kb on - strand at 156.628 kb on + strand, within GFF136 at 156.884 kb on - strand, within GFF136 at 157.037 kb on - strand at 157.042 kb on + strand at 157.042 kb on + strand at 157.042 kb on + strand at 157.042 kb on + strand at 157.042 kb on + strand at 157.042 kb on + strand at 157.043 kb on - strand at 157.043 kb on - strand at 157.075 kb on + strand at 157.075 kb on + strand at 157.165 kb on + strand at 157.165 kb on + strand at 157.165 kb on + strand at 157.165 kb on + strand at 157.166 kb on - strand at 157.166 kb on - strand at 157.166 kb on - strand at 157.166 kb on - strand at 157.166 kb on - strand at 157.194 kb on - strand at 157.209 kb on - strand at 157.472 kb on + strand, within GFF137 at 157.473 kb on - strand, within GFF137 at 157.508 kb on + strand, within GFF137 at 157.508 kb on + strand, within GFF137 at 157.509 kb on - strand, within GFF137 at 157.509 kb on - strand, within GFF137 at 157.511 kb on + strand, within GFF137 at 157.626 kb on - strand, within GFF137 at 157.740 kb on - strand, within GFF137 at 157.740 kb on - strand, within GFF137 at 158.003 kb on + strand, within GFF137 at 158.004 kb on - strand, within GFF137 at 158.183 kb on + strand, within GFF137 at 158.184 kb on - strand, within GFF137 at 158.184 kb on - strand, within GFF137 at 158.184 kb on - strand, within GFF137 at 158.184 kb on - strand, within GFF137 at 158.198 kb on - strand, within GFF137 at 158.357 kb on + strand, within GFF137 at 158.621 kb on + strand at 158.621 kb on + strand at 158.622 kb on - strand at 158.645 kb on - strand at 158.684 kb on - strand at 158.757 kb on + strand at 158.758 kb on - strand at 158.767 kb on + strand at 158.767 kb on + strand at 158.767 kb on + strand at 158.767 kb on + strand at 158.767 kb on + strand at 158.800 kb on - strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.805 kb on + strand at 158.806 kb on - strand at 158.806 kb on - strand at 158.806 kb on - strand at 158.806 kb on - strand at 158.806 kb on - strand at 158.815 kb on + strand at 158.816 kb on - strand at 158.816 kb on - strand at 158.816 kb on - strand at 158.835 kb on - strand at 158.835 kb on - strand at 158.835 kb on - strand at 158.970 kb on + strand, within GFF138 at 158.971 kb on - strand, within GFF138 at 158.983 kb on - strand, within GFF138 at 158.983 kb on - strand, within GFF138 at 159.078 kb on + strand, within GFF138 at 159.078 kb on + strand, within GFF138 at 159.078 kb on + strand, within GFF138 at 159.078 kb on + strand, within GFF138 at 159.078 kb on + strand, within GFF138 at 159.079 kb on - strand, within GFF138 at 159.079 kb on - strand, within GFF138 at 159.079 kb on - strand, within GFF138 at 159.079 kb on - strand, within GFF138 at 159.079 kb on - strand, within GFF138 at 159.102 kb on + strand, within GFF138 at 159.102 kb on + strand, within GFF138 at 159.103 kb on - strand, within GFF138 at 159.103 kb on - strand, within GFF138 at 159.162 kb on + strand, within GFF138 at 159.403 kb on - strand, within GFF138
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 156,192 + -1.6 156,339 + +0.9 156,468 + +0.2 156,468 + +0.1 156,469 - -0.6 156,499 - -0.4 156,628 + GFF136 0.24 +0.3 156,884 - GFF136 0.67 +0.8 157,037 - -0.8 157,042 + -1.2 157,042 + -0.7 157,042 + -0.1 157,042 + +0.2 157,042 + +1.1 157,042 + +0.3 157,043 - +0.6 157,043 - -0.2 157,075 + -0.8 157,075 + +0.3 157,165 + +0.8 157,165 + -0.4 157,165 + +1.4 157,165 + +1.0 157,166 - -0.1 157,166 - -0.4 157,166 - +0.1 157,166 - +0.1 157,166 - +2.0 157,194 - +0.1 157,209 - +0.0 157,472 + GFF137 0.21 +0.8 157,473 - GFF137 0.21 +0.6 157,508 + GFF137 0.23 +1.5 157,508 + GFF137 0.23 +1.1 157,509 - GFF137 0.23 +0.3 157,509 - GFF137 0.23 -0.5 157,511 + GFF137 0.23 +0.6 157,626 - GFF137 0.31 -0.2 157,740 - GFF137 0.39 +0.3 157,740 - GFF137 0.39 -0.2 158,003 + GFF137 0.57 -0.1 158,004 - GFF137 0.57 +0.7 158,183 + GFF137 0.69 +0.6 158,184 - GFF137 0.69 +0.6 158,184 - GFF137 0.69 -0.7 158,184 - GFF137 0.69 +0.2 158,184 - GFF137 0.69 -0.2 158,198 - GFF137 0.70 +0.1 158,357 + GFF137 0.81 +0.7 158,621 + -1.0 158,621 + +0.2 158,622 - +0.6 158,645 - +0.0 158,684 - -1.2 158,757 + +1.6 158,758 - +0.4 158,767 + -0.2 158,767 + -0.1 158,767 + -0.7 158,767 + +0.4 158,767 + -0.1 158,800 - +1.7 158,805 + -0.3 158,805 + -0.1 158,805 + +0.2 158,805 + -1.3 158,805 + +0.1 158,805 + +0.2 158,805 + -0.4 158,806 - +0.3 158,806 - +1.7 158,806 - +0.3 158,806 - -1.5 158,806 - +1.7 158,815 + +0.2 158,816 - -0.0 158,816 - -0.3 158,816 - -0.5 158,835 - -0.4 158,835 - +1.2 158,835 - -0.3 158,970 + GFF138 0.11 -0.2 158,971 - GFF138 0.11 +0.4 158,983 - GFF138 0.12 -0.6 158,983 - GFF138 0.12 +1.9 159,078 + GFF138 0.17 -1.5 159,078 + GFF138 0.17 -0.7 159,078 + GFF138 0.17 +0.8 159,078 + GFF138 0.17 -0.2 159,078 + GFF138 0.17 -0.7 159,079 - GFF138 0.17 +0.4 159,079 - GFF138 0.17 -0.6 159,079 - GFF138 0.17 -0.5 159,079 - GFF138 0.17 -0.2 159,079 - GFF138 0.17 -0.4 159,102 + GFF138 0.18 +0.0 159,102 + GFF138 0.18 -0.1 159,103 - GFF138 0.19 +0.8 159,103 - GFF138 0.19 -0.1 159,162 + GFF138 0.22 +1.6 159,403 - GFF138 0.36 +0.7
Or see this region's nucleotide sequence