Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1289 and GFF1290 are separated by 42 nucleotides GFF1290 and GFF1291 are separated by 14 nucleotides GFF1291 and GFF1292 are separated by 94 nucleotides
GFF1289 - Soluble pyridine nucleotide transhydrogenase, at 46,144 to 47,538
GFF1289
GFF1290 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 47,581 to 48,303
GFF1290
GFF1291 - hypothetical protein, at 48,318 to 48,899
GFF1291
GFF1292 - Lipoprotein-releasing system transmembrane protein LolC, at 48,994 to 50,244
GFF1292
Position (kb) 48
49 Strain fitness (log2 ratio) -2
-1
0
1
2 at 47.442 kb on + strand at 47.512 kb on + strand at 47.625 kb on + strand at 47.626 kb on - strand at 47.739 kb on + strand, within GFF1290 at 47.740 kb on - strand, within GFF1290 at 47.740 kb on - strand, within GFF1290 at 47.777 kb on + strand, within GFF1290 at 47.778 kb on - strand, within GFF1290 at 48.083 kb on + strand, within GFF1290 at 48.084 kb on - strand, within GFF1290 at 48.084 kb on - strand, within GFF1290 at 48.290 kb on + strand at 48.290 kb on + strand at 48.291 kb on - strand at 48.291 kb on - strand at 48.291 kb on - strand at 48.315 kb on - strand at 48.315 kb on - strand at 48.320 kb on - strand at 48.382 kb on + strand, within GFF1291 at 48.382 kb on + strand, within GFF1291 at 48.382 kb on + strand, within GFF1291 at 48.383 kb on - strand, within GFF1291 at 48.442 kb on + strand, within GFF1291 at 48.442 kb on + strand, within GFF1291 at 48.443 kb on - strand, within GFF1291 at 48.513 kb on + strand, within GFF1291 at 48.560 kb on - strand, within GFF1291 at 48.862 kb on + strand at 48.888 kb on + strand at 48.888 kb on + strand at 48.888 kb on + strand at 48.888 kb on + strand at 48.888 kb on + strand at 48.933 kb on + strand at 48.933 kb on + strand at 48.933 kb on + strand at 48.933 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 47,442 + -0.5 47,512 + -1.5 47,625 + +0.1 47,626 - +1.1 47,739 + GFF1290 0.22 +0.4 47,740 - GFF1290 0.22 -0.4 47,740 - GFF1290 0.22 +0.1 47,777 + GFF1290 0.27 -0.5 47,778 - GFF1290 0.27 +1.1 48,083 + GFF1290 0.69 -2.2 48,084 - GFF1290 0.70 -0.4 48,084 - GFF1290 0.70 -0.4 48,290 + -0.8 48,290 + +0.8 48,291 - +0.6 48,291 - -0.1 48,291 - +0.2 48,315 - -0.2 48,315 - -0.3 48,320 - +1.2 48,382 + GFF1291 0.11 -0.2 48,382 + GFF1291 0.11 -0.4 48,382 + GFF1291 0.11 +0.7 48,383 - GFF1291 0.11 -0.7 48,442 + GFF1291 0.21 +0.3 48,442 + GFF1291 0.21 +0.4 48,443 - GFF1291 0.21 -0.5 48,513 + GFF1291 0.34 +1.2 48,560 - GFF1291 0.42 +1.8 48,862 + +0.4 48,888 + +0.7 48,888 + +0.0 48,888 + -0.2 48,888 + +0.0 48,888 + +0.9 48,933 + -0.5 48,933 + +0.6 48,933 + +0.4 48,933 + -0.1
Or see this region's nucleotide sequence