Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1185 and GFF1186 are separated by 112 nucleotides GFF1186 and GFF1187 are separated by 22 nucleotides GFF1187 and GFF1188 are separated by 12 nucleotides GFF1188 and GFF1189 overlap by 8 nucleotides
GFF1185 - hypothetical protein, at 521,424 to 523,043
GFF1185
GFF1186 - hypothetical protein, at 523,156 to 523,587
GFF1186
GFF1187 - hypothetical protein, at 523,610 to 523,750
GFF1187
GFF1188 - hypothetical protein, at 523,763 to 524,125
GFF1188
GFF1189 - putative manganese catalase, at 524,118 to 524,999
GFF1189
Position (kb) 523
524
525 Strain fitness (log2 ratio) -1
0
1
2 at 522.833 kb on - strand, within GFF1185 at 522.833 kb on - strand, within GFF1185 at 522.983 kb on + strand at 522.983 kb on + strand at 522.984 kb on - strand at 523.008 kb on - strand at 523.067 kb on + strand at 523.232 kb on + strand, within GFF1186 at 523.233 kb on - strand, within GFF1186 at 523.233 kb on - strand, within GFF1186 at 523.288 kb on + strand, within GFF1186 at 523.298 kb on + strand, within GFF1186 at 523.301 kb on + strand, within GFF1186 at 523.301 kb on + strand, within GFF1186 at 523.384 kb on + strand, within GFF1186 at 523.618 kb on + strand at 523.741 kb on - strand at 523.815 kb on - strand, within GFF1188 at 523.934 kb on + strand, within GFF1188 at 523.935 kb on - strand, within GFF1188 at 524.297 kb on - strand, within GFF1189 at 524.351 kb on + strand, within GFF1189 at 524.351 kb on + strand, within GFF1189 at 524.351 kb on + strand, within GFF1189 at 524.351 kb on + strand, within GFF1189 at 524.352 kb on - strand, within GFF1189 at 524.352 kb on - strand, within GFF1189 at 524.359 kb on + strand, within GFF1189 at 524.359 kb on + strand, within GFF1189 at 524.359 kb on + strand, within GFF1189 at 524.359 kb on + strand, within GFF1189 at 524.602 kb on + strand, within GFF1189 at 524.602 kb on + strand, within GFF1189 at 524.602 kb on + strand, within GFF1189 at 524.707 kb on + strand, within GFF1189 at 524.823 kb on + strand, within GFF1189 at 524.823 kb on + strand, within GFF1189 at 524.824 kb on - strand, within GFF1189 at 524.987 kb on + strand at 524.987 kb on + strand at 524.987 kb on + strand at 524.991 kb on + strand at 524.991 kb on + strand at 524.992 kb on - strand at 524.992 kb on - strand at 524.992 kb on - strand at 525.058 kb on + strand at 525.058 kb on + strand at 525.058 kb on + strand at 525.058 kb on + strand at 525.059 kb on - strand at 525.059 kb on - strand at 525.059 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 522,833 - GFF1185 0.87 -1.3 522,833 - GFF1185 0.87 +0.2 522,983 + -0.8 522,983 + -0.2 522,984 - -0.5 523,008 - +0.7 523,067 + +1.5 523,232 + GFF1186 0.18 +0.2 523,233 - GFF1186 0.18 +0.1 523,233 - GFF1186 0.18 +0.8 523,288 + GFF1186 0.31 +0.5 523,298 + GFF1186 0.33 -0.4 523,301 + GFF1186 0.34 -0.6 523,301 + GFF1186 0.34 -0.8 523,384 + GFF1186 0.53 -1.0 523,618 + -0.6 523,741 - -0.5 523,815 - GFF1188 0.14 +0.8 523,934 + GFF1188 0.47 -0.8 523,935 - GFF1188 0.47 +0.7 524,297 - GFF1189 0.20 -0.2 524,351 + GFF1189 0.26 +0.4 524,351 + GFF1189 0.26 +1.1 524,351 + GFF1189 0.26 -1.2 524,351 + GFF1189 0.26 +0.0 524,352 - GFF1189 0.27 +1.1 524,352 - GFF1189 0.27 -0.1 524,359 + GFF1189 0.27 -0.3 524,359 + GFF1189 0.27 +0.6 524,359 + GFF1189 0.27 +0.0 524,359 + GFF1189 0.27 -0.1 524,602 + GFF1189 0.55 +1.7 524,602 + GFF1189 0.55 +1.5 524,602 + GFF1189 0.55 -0.2 524,707 + GFF1189 0.67 +0.3 524,823 + GFF1189 0.80 +2.0 524,823 + GFF1189 0.80 +0.1 524,824 - GFF1189 0.80 +0.8 524,987 + -1.2 524,987 + +0.8 524,987 + -0.5 524,991 + +0.1 524,991 + +0.7 524,992 - +0.1 524,992 - -0.2 524,992 - +0.3 525,058 + +0.4 525,058 + -0.4 525,058 + -0.0 525,058 + -0.3 525,059 - -0.7 525,059 - -0.5 525,059 - +0.2
Or see this region's nucleotide sequence