Strain Fitness in Sphingobium sp. HT1-2 around GFF5277

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
5,267,561	-				-0.2
5,267,565	+				+1.0
5,267,587	+				+0.5
5,267,608	-				+1.7
5,267,619	+				-1.3
5,267,627	-				-0.1
5,267,627	-				-0.6
5,267,627	-				-0.8
5,267,635	+				-0.5
5,267,642	+				-0.7
5,267,643	-				-0.0
5,267,645	-				-0.3
5,267,648	+				-0.9
5,267,648	+				-0.7
5,267,648	+				+0.4
5,267,648	+				-1.0
5,267,648	+				-1.2
5,267,648	+				-0.9
5,267,648	+				-1.7
5,267,656	-				+0.3
5,267,656	-				-1.8
5,267,656	-				-0.8
5,267,656	-				-0.1
5,267,658	-				+0.6
5,267,680	+				-0.8
5,267,680	+				-1.8
5,267,680	+				-1.1
5,267,687	+		GFF5276	0.11	-0.5
5,267,688	-		GFF5276	0.11	+0.1
5,267,688	-		GFF5276	0.11	+0.2
5,267,688	-		GFF5276	0.11	-0.1
5,267,688	-		GFF5276	0.11	-0.1
5,267,696	-		GFF5276	0.12	-2.1
5,267,696	-		GFF5276	0.12	+0.3
5,267,778	+		GFF5276	0.26	+1.6
5,267,783	+		GFF5276	0.27	-1.7
5,267,786	-		GFF5276	0.27	-0.4
5,267,786	-		GFF5276	0.27	-1.5
5,267,808	+		GFF5276	0.31	-1.0
5,267,820	+		GFF5276	0.33	+0.6
5,267,821	-		GFF5276	0.33	-0.5
5,267,822	-		GFF5276	0.33	+0.6
5,267,831	+		GFF5276	0.35	-0.6
5,267,833	-		GFF5276	0.35	-1.0
5,267,837	+		GFF5276	0.36	+0.8
5,267,837	-		GFF5276	0.36	-0.5
5,267,847	+		GFF5276	0.37	-0.5
5,267,856	-		GFF5276	0.39	+0.5
5,267,871	+		GFF5276	0.41	+0.6
5,267,879	-		GFF5276	0.43	-0.3
5,267,893	-		GFF5276	0.45	+0.5
5,267,904	+		GFF5276	0.47	+1.0
5,267,908	+		GFF5276	0.48	+0.2
5,267,914	+		GFF5276	0.49	+0.4
5,267,927	-		GFF5276	0.51	+0.3
5,267,937	+		GFF5276	0.52	-0.5
5,267,940	-		GFF5276	0.53	-0.8
5,267,940	-		GFF5276	0.53	-0.6
5,267,949	-		GFF5276	0.54	+0.4
5,267,949	-		GFF5276	0.54	-1.1
5,267,950	+		GFF5276	0.55	-0.5
5,267,972	+		GFF5276	0.58	-1.4
5,267,972	+		GFF5276	0.58	-0.6
5,267,980	-		GFF5276	0.60	+0.2
5,267,980	-		GFF5276	0.60	-1.5
5,267,991	+		GFF5276	0.61	-0.4
5,268,005	+		GFF5276	0.64	-1.8
5,268,010	+		GFF5276	0.65	-0.1
5,268,013	-		GFF5276	0.65	+1.1
5,268,015	+		GFF5276	0.65	+0.7
5,268,017	-		GFF5276	0.66	+0.7
5,268,024	+		GFF5276	0.67	-0.1
5,268,024	+		GFF5276	0.67	-1.5
5,268,024	+		GFF5276	0.67	+0.9
5,268,024	+		GFF5276	0.67	-1.2
5,268,024	+		GFF5276	0.67	-1.1
5,268,024	+		GFF5276	0.67	-2.8
5,268,024	+		GFF5276	0.67	+0.4
5,268,032	-		GFF5276	0.68	-1.8
5,268,032	-		GFF5276	0.68	-0.1
5,268,032	-		GFF5276	0.68	-0.7
5,268,032	-		GFF5276	0.68	-1.2
5,268,032	-		GFF5276	0.68	-0.9
5,268,032	-		GFF5276	0.68	+0.3
5,268,032	-		GFF5276	0.68	-0.7
5,268,032	-		GFF5276	0.68	-0.1
5,268,032	-		GFF5276	0.68	-1.4
5,268,032	-		GFF5276	0.68	-1.9
5,268,033	+		GFF5276	0.68	-1.0
5,268,052	-		GFF5276	0.71	-0.0
5,268,057	+		GFF5276	0.72	-2.0
5,268,057	+		GFF5276	0.72	-1.3
5,268,057	+		GFF5276	0.72	+0.9
5,268,065	-		GFF5276	0.74	-0.3
5,268,065	-		GFF5276	0.74	+0.3
5,268,065	-		GFF5276	0.74	-0.8
5,268,084	+		GFF5276	0.77	-1.2
5,268,087	+		GFF5276	0.77	+0.1
5,268,095	+		GFF5276	0.79	-0.9
5,268,103	-		GFF5276	0.80	-0.6
5,268,115	+		GFF5276	0.82	-1.4
5,268,115	+		GFF5276	0.82	-0.7
5,268,115	+		GFF5276	0.82	+1.3
5,268,139	+		GFF5276	0.86	-0.8
5,268,152	+		GFF5276	0.88	-1.1
5,268,157	+		GFF5276	0.89	-0.5
5,268,160	-		GFF5276	0.89	-0.6
5,268,170	-				-1.0
5,268,199	+				-1.2
5,268,207	-				+0.9
5,268,209	-				+0.4
5,268,213	+				-1.0
5,268,223	+				+0.4
5,268,226	-				+0.5
5,268,229	-				-0.6
5,268,231	-				+0.5
5,268,231	-				+0.9
5,268,231	-				-1.3
5,268,278	+				-1.1
5,268,286	+				+0.4
5,268,313	-				-0.4
5,268,342	+				-0.8
5,268,357	+				+0.4
5,268,359	+				+0.1
5,268,359	+				-1.5
5,268,378	+				+0.3
5,268,379	+				-1.1
5,268,385	+				-0.7
5,268,385	+				-0.2
5,268,385	+				+0.5
5,268,385	+				-0.6
5,268,386	+				-1.1
5,268,386	+				-0.9
5,268,393	-				-0.7
5,268,409	+				-0.7
5,268,409	+				+1.4
5,268,409	+				+1.4
5,268,475	+				-2.8
5,268,490	-				+0.9
5,268,494	+				-0.4
5,268,553	-				+0.1
5,268,553	-				-0.5
5,268,553	-				-0.9
5,268,553	-				-1.1
5,268,660	+		GFF5277	0.15	+0.4
5,268,664	+		GFF5277	0.15	+0.6
5,268,665	+		GFF5277	0.15	+0.7
5,268,678	+		GFF5277	0.17	-1.0
5,268,702	+		GFF5277	0.20	-0.7
5,268,702	+		GFF5277	0.20	-0.8
5,268,702	+		GFF5277	0.20	-0.6
5,268,702	+		GFF5277	0.20	-1.5
5,268,702	+		GFF5277	0.20	+0.4
5,268,702	+		GFF5277	0.20	-1.7
5,268,702	+		GFF5277	0.20	-0.7
5,268,702	+		GFF5277	0.20	-1.6
5,268,702	+		GFF5277	0.20	+1.5
5,268,702	+		GFF5277	0.20	+1.7
5,268,702	+		GFF5277	0.20	+0.1
5,268,702	+		GFF5277	0.20	-0.7
5,268,709	+		GFF5277	0.21	-1.4
5,268,710	+		GFF5277	0.21	+0.2
5,268,710	+		GFF5277	0.21	-0.0
5,268,710	+		GFF5277	0.21	-0.1
5,268,710	-		GFF5277	0.21	+0.3
5,268,710	-		GFF5277	0.21	+0.1
5,268,710	-		GFF5277	0.21	-0.5
5,268,710	-		GFF5277	0.21	+0.7
5,268,715	+		GFF5277	0.21	-0.7
5,268,715	+		GFF5277	0.21	-0.0
5,268,715	+		GFF5277	0.21	-0.7
5,268,715	+		GFF5277	0.21	-1.5
5,268,715	+		GFF5277	0.21	+0.8
5,268,715	+		GFF5277	0.21	+0.4
5,268,715	+		GFF5277	0.21	-0.3
5,268,715	+		GFF5277	0.21	+0.3
5,268,715	+		GFF5277	0.21	-0.8
5,268,717	-		GFF5277	0.21	-0.6
5,268,718	-		GFF5277	0.22	-1.0
5,268,718	-		GFF5277	0.22	-1.4
5,268,718	-		GFF5277	0.22	+0.2
5,268,723	-		GFF5277	0.22	-0.3
5,268,723	-		GFF5277	0.22	-1.2
5,268,723	-		GFF5277	0.22	-0.3
5,268,723	-		GFF5277	0.22	-0.8
5,268,723	-		GFF5277	0.22	-1.3
5,268,723	-		GFF5277	0.22	-0.9
5,268,723	-		GFF5277	0.22	-0.7
5,268,728	-		GFF5277	0.23	+0.4
5,268,741	+		GFF5277	0.24	-0.6
5,268,751	+		GFF5277	0.26	+0.2
5,268,751	+		GFF5277	0.26	+0.1
5,268,751	+		GFF5277	0.26	-0.6
5,268,751	+		GFF5277	0.26	-1.3
5,268,751	+		GFF5277	0.26	-2.1
5,268,751	+		GFF5277	0.26	-0.7
5,268,758	+		GFF5277	0.26	-1.0
5,268,758	+		GFF5277	0.26	+0.2
5,268,759	-		GFF5277	0.26	+0.2
5,268,759	-		GFF5277	0.26	+1.0
5,268,759	-		GFF5277	0.26	-2.6
5,268,759	-		GFF5277	0.26	-0.8
5,268,759	-		GFF5277	0.26	-0.8
5,268,759	-		GFF5277	0.26	+1.1
5,268,766	-		GFF5277	0.27	-0.7
5,268,766	-		GFF5277	0.27	-1.3
5,268,766	-		GFF5277	0.27	-0.6
5,268,773	+		GFF5277	0.28	+0.3
5,268,773	+		GFF5277	0.28	-0.1
5,268,773	+		GFF5277	0.28	-1.5
5,268,773	+		GFF5277	0.28	+0.9
5,268,773	+		GFF5277	0.28	+0.6
5,268,773	+		GFF5277	0.28	-1.7
5,268,776	-		GFF5277	0.29	-0.8
5,268,781	-		GFF5277	0.29	-1.8
5,268,781	-		GFF5277	0.29	+0.4
5,268,781	-		GFF5277	0.29	-0.8
5,268,781	-		GFF5277	0.29	-1.4
5,268,781	-		GFF5277	0.29	+1.1
5,268,781	-		GFF5277	0.29	+0.4
5,268,781	-		GFF5277	0.29	+0.7
5,268,781	-		GFF5277	0.29	-1.5
5,268,781	-		GFF5277	0.29	+0.4
5,268,781	-		GFF5277	0.29	+1.4
5,268,781	-		GFF5277	0.29	-1.2
5,268,781	-		GFF5277	0.29	-0.7
5,268,781	-		GFF5277	0.29	-1.2
5,268,783	+		GFF5277	0.29	+0.9
5,268,786	-		GFF5277	0.30	-0.2
5,268,788	-		GFF5277	0.30	-0.5
5,268,819	-		GFF5277	0.34	+0.4
5,268,822	+		GFF5277	0.34	-1.0
5,268,822	+		GFF5277	0.34	-1.9
5,268,822	+		GFF5277	0.34	-0.2
5,268,822	+		GFF5277	0.34	-3.0
5,268,822	+		GFF5277	0.34	+0.4
5,268,822	+		GFF5277	0.34	+1.4
5,268,822	+		GFF5277	0.34	-0.5
5,268,822	+		GFF5277	0.34	+1.0
5,268,822	+		GFF5277	0.34	-0.6
5,268,822	+		GFF5277	0.34	+0.0
5,268,822	+		GFF5277	0.34	+0.9
5,268,822	+		GFF5277	0.34	-2.2
5,268,830	-		GFF5277	0.35	-0.8
5,268,830	-		GFF5277	0.35	-1.9
5,268,830	-		GFF5277	0.35	-0.8
5,268,830	-		GFF5277	0.35	-0.5
5,268,830	-		GFF5277	0.35	-2.3
5,268,830	-		GFF5277	0.35	-1.1
5,268,830	-		GFF5277	0.35	+0.9
5,268,830	-		GFF5277	0.35	+0.9
5,268,830	-		GFF5277	0.35	+0.3
5,268,830	-		GFF5277	0.35	-0.1
5,268,830	-		GFF5277	0.35	+0.6
5,268,830	-		GFF5277	0.35	+1.1
5,268,830	-		GFF5277	0.35	-1.0
5,268,830	-		GFF5277	0.35	+0.6
5,268,835	-		GFF5277	0.36	-0.3
5,268,837	+		GFF5277	0.36	+0.5
5,268,845	-		GFF5277	0.37	-0.0
5,268,855	+		GFF5277	0.38	+1.7
5,268,863	+		GFF5277	0.39	-0.4
5,268,869	+		GFF5277	0.40	-0.9
5,268,869	+		GFF5277	0.40	-0.6
5,268,871	-		GFF5277	0.40	-1.7
5,268,874	+		GFF5277	0.40	-0.0
5,268,874	+		GFF5277	0.40	-0.7
5,268,874	+		GFF5277	0.40	-1.0
5,268,874	+		GFF5277	0.40	-0.9
5,268,882	-		GFF5277	0.41	-0.2
5,268,882	-		GFF5277	0.41	+0.3
5,268,882	-		GFF5277	0.41	+1.3
5,268,890	+		GFF5277	0.42	-1.5
5,268,890	+		GFF5277	0.42	+0.2
5,268,892	+		GFF5277	0.42	-1.6
5,268,892	+		GFF5277	0.42	-0.8
5,268,892	+		GFF5277	0.42	+0.8
5,268,900	+		GFF5277	0.43	-0.7
5,268,900	+		GFF5277	0.43	+0.1
5,268,900	-		GFF5277	0.43	-0.7
5,268,900	-		GFF5277	0.43	-1.5
5,268,900	-		GFF5277	0.43	-0.2
5,268,900	-		GFF5277	0.43	+0.2
5,268,900	-		GFF5277	0.43	-0.8
5,268,915	+		GFF5277	0.45	-0.7
5,268,915	+		GFF5277	0.45	-0.3
5,268,923	+		GFF5277	0.46	+0.1
5,268,933	+		GFF5277	0.47	+0.8
5,268,933	+		GFF5277	0.47	-0.9
5,268,933	+		GFF5277	0.47	+0.6
5,268,933	+		GFF5277	0.47	+0.4
5,268,933	+		GFF5277	0.47	-0.1
5,268,933	+		GFF5277	0.47	-1.2
5,268,933	+		GFF5277	0.47	+0.4
5,268,941	-		GFF5277	0.48	+0.4
5,268,941	-		GFF5277	0.48	-1.1
5,268,941	-		GFF5277	0.48	+0.1
5,268,941	-		GFF5277	0.48	+0.3
5,268,941	-		GFF5277	0.48	+0.7
5,268,941	-		GFF5277	0.48	-0.9
5,268,941	-		GFF5277	0.48	+0.9
5,268,941	-		GFF5277	0.48	-1.7
5,268,941	-		GFF5277	0.48	+1.3
5,268,941	-		GFF5277	0.48	-0.6
5,268,941	-		GFF5277	0.48	+0.1
5,268,941	-		GFF5277	0.48	-1.3
5,268,941	-		GFF5277	0.48	-0.0
5,268,943	+		GFF5277	0.49	-1.5
5,268,976	-		GFF5277	0.53	-0.5
5,268,976	-		GFF5277	0.53	-0.9
5,268,976	-		GFF5277	0.53	-2.6
5,268,976	-		GFF5277	0.53	-0.3
5,268,976	-		GFF5277	0.53	-1.7
5,268,986	-		GFF5277	0.54	+0.4
5,268,986	-		GFF5277	0.54	+1.3
5,269,062	+		GFF5277	0.63	+1.4
5,269,068	+		GFF5277	0.64	-0.7
5,269,069	+		GFF5277	0.64	+0.2
5,269,070	+		GFF5277	0.64	+1.0
5,269,085	+		GFF5277	0.66	-1.3
5,269,085	+		GFF5277	0.66	+1.2
5,269,094	+		GFF5277	0.67	-0.5
5,269,095	+		GFF5277	0.67	-1.1
5,269,103	-		GFF5277	0.68	-1.2
5,269,122	+		GFF5277	0.70	+1.4
5,269,130	-		GFF5277	0.71	+1.5
5,269,132	+		GFF5277	0.71	-0.9
5,269,137	+		GFF5277	0.72	-0.5
5,269,140	-		GFF5277	0.72	+1.1
5,269,142	+		GFF5277	0.72	-1.4
5,269,142	+		GFF5277	0.72	+1.3
5,269,150	-		GFF5277	0.73	-0.1
5,269,150	-		GFF5277	0.73	+0.7
5,269,154	+		GFF5277	0.74	-0.8
5,269,157	-		GFF5277	0.74	+0.5
5,269,159	+		GFF5277	0.74	-0.3
5,269,160	+		GFF5277	0.75	+0.4
5,269,160	+		GFF5277	0.75	-0.5
5,269,168	-		GFF5277	0.76	-0.6
5,269,168	-		GFF5277	0.76	-1.4
5,269,168	-		GFF5277	0.76	-0.6
5,269,173	-		GFF5277	0.76	+0.8
5,269,184	+		GFF5277	0.77	+0.7
5,269,184	+		GFF5277	0.77	-0.3
5,269,184	+		GFF5277	0.77	-0.8
5,269,187	-		GFF5277	0.78	-1.0
5,269,187	-		GFF5277	0.78	-0.9
5,269,192	-		GFF5277	0.78	+0.3
5,269,192	-		GFF5277	0.78	+1.0
5,269,194	+		GFF5277	0.79	-0.0
5,269,194	+		GFF5277	0.79	+0.1
5,269,194	+		GFF5277	0.79	-0.5
5,269,194	+		GFF5277	0.79	-0.7
5,269,196	+		GFF5277	0.79	-0.1
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5,269,298	-				+0.1
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5,269,668	+				-0.7
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5,269,674	+				+0.3
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5,269,674	+				+0.1
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5,269,682	-				-0.8
5,269,682	-				-1.1
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5,269,684	+				+0.9
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5,269,697	+				-1.9
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