Strain Fitness in Sphingobium sp. HT1-2 around GFF4266

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
4,279,765	+				-1.6
4,279,765	+				+1.2
4,279,765	+				-1.4
4,279,773	-				-1.2
4,279,773	-				-1.2
4,279,773	-				-2.8
4,279,773	-				-0.8
4,279,773	-				-1.5
4,279,773	-				-0.2
4,279,783	-				-1.4
4,279,783	-				-0.9
4,279,821	-				-1.3
4,279,835	+				-2.4
4,279,840	+				-1.7
4,279,845	+				-1.2
4,279,845	+				+1.7
4,279,870	+				-0.0
4,279,878	+				-2.0
4,279,906	+		GFF4265	0.22	-0.0
4,279,906	+		GFF4265	0.22	+0.1
4,279,914	-		GFF4265	0.26	-0.7
4,279,916	+		GFF4265	0.27	+0.4
4,279,918	+		GFF4265	0.28	+0.1
4,279,926	-		GFF4265	0.32	-1.3
4,279,926	-		GFF4265	0.32	-2.0
4,279,926	-		GFF4265	0.32	-0.6
4,279,941	-		GFF4265	0.38	-1.4
4,279,941	-		GFF4265	0.38	-0.7
4,279,941	-		GFF4265	0.38	-0.3
4,279,947	-		GFF4265	0.41	+0.8
4,279,952	-		GFF4265	0.43	-0.1
4,279,957	-		GFF4265	0.46	+0.1
4,279,974	-		GFF4265	0.53	+0.2
4,279,975	-		GFF4265	0.54	-0.1
4,279,975	-		GFF4265	0.54	-0.0
4,279,981	+		GFF4265	0.57	-0.6
4,279,989	-		GFF4265	0.60	-1.0
4,279,993	-		GFF4265	0.62	-0.6
4,280,009	-		GFF4265	0.69	-1.1
4,280,030	+		GFF4265	0.79	-0.5
4,280,030	-		GFF4265	0.79	-1.6
4,280,035	+		GFF4265	0.81	-0.2
4,280,035	+		GFF4265	0.81	-0.5
4,280,035	+		GFF4265	0.81	-1.8
4,280,035	+		GFF4265	0.81	-1.3
4,280,035	+		GFF4265	0.81	-1.5
4,280,043	-		GFF4265	0.85	-0.5
4,280,043	-		GFF4265	0.85	-1.3
4,280,043	-		GFF4265	0.85	+0.3
4,280,057	+				-0.6
4,280,057	+				-0.5
4,280,057	+				-2.0
4,280,065	+				+0.1
4,280,065	-				-0.8
4,280,065	-				-1.5
4,280,077	+				-0.6
4,280,077	+				-2.2
4,280,085	-				-0.8
4,280,095	+				-1.0
4,280,103	-				-1.6
4,280,109	+				-1.9
4,280,112	-				+0.4
4,280,113	-				-1.3
4,280,117	-				-0.5
4,280,117	-				-0.0
4,280,121	+				+0.2
4,280,129	-				+0.3
4,280,139	+				-0.0
4,280,144	+				+0.2
4,280,147	-				-1.5
4,280,147	-				-0.1
4,280,149	-				-1.3
4,280,149	-				-1.2
4,280,149	-				-0.5
4,280,154	-				-0.8
4,280,156	+				-1.6
4,280,157	-				-1.8
4,280,164	-				+0.7
4,280,170	-				-0.8
4,280,172	-				+1.0
4,280,192	+				+0.6
4,280,198	+				-0.4
4,280,198	+				+0.5
4,280,198	+				-1.2
4,280,198	+				-1.3
4,280,200	-				+0.4
4,280,205	-				-1.1
4,280,206	-				-0.3
4,280,206	-				-0.6
4,280,213	+				+0.6
4,280,213	+				-1.5
4,280,213	+				-1.1
4,280,213	+				-1.2
4,280,213	+				-0.9
4,280,213	+				-0.9
4,280,213	+				-0.6
4,280,213	+				-1.4
4,280,213	+				+0.2
4,280,213	+				+0.8
4,280,221	-				-0.6
4,280,221	-				-1.6
4,280,221	-				-0.5
4,280,221	-				-0.7
4,280,221	-				-0.0
4,280,221	-				-0.1
4,280,221	-				-0.7
4,280,221	-				+0.9
4,280,221	-				+0.3
4,280,227	-				-0.8
4,280,227	-				+0.3
4,280,235	+				+0.5
4,280,236	-				-1.0
4,280,241	-				+0.3
4,280,241	-				-0.5
4,280,243	-				-0.5
4,280,250	+				-1.0
4,280,253	-				-1.8
4,280,264	-				-0.0
4,280,264	-				+0.5
4,280,269	-				-1.6
4,280,271	+				-0.9
4,280,271	+				-0.4
4,280,279	-				-2.0
4,280,279	-				-1.8
4,280,347	+				+0.4
4,280,369	-				+0.8
4,280,374	+				-1.2
4,280,379	-				+1.1
4,280,397	-				-1.4
4,280,399	+				-1.0
4,280,408	-				-0.9
4,280,411	-				-1.9
4,280,418	+				+0.4
4,280,418	+				-1.3
4,280,419	-				-2.6
4,280,426	-				-0.0
4,280,426	-				-0.3
4,280,426	-				-0.6
4,280,445	+				-0.6
4,280,460	+				-1.8
4,280,475	+				-0.2
4,280,477	-				-2.2
4,280,480	+				-0.8
4,280,480	+				-0.6
4,280,480	+				-0.9
4,280,483	-				-1.3
4,280,492	-				-0.0
4,280,556	-				+0.3
4,280,582	-				+1.3
4,280,582	-				+1.7
4,280,599	-				+0.0
4,280,600	-				-1.7
4,280,602	-				-0.8
4,280,624	+				+0.7
4,280,626	-				-1.2
4,280,679	-				-2.6
4,280,683	-				-0.6
4,280,684	-				+0.9
4,280,684	-				-0.0
4,280,693	+				-2.4
4,280,698	+				+1.1
4,280,708	+				-1.5
4,280,708	+				-1.3
4,280,716	-				-0.5
4,280,730	+				+0.8
4,280,735	-				+0.1
4,280,735	-				-0.9
4,280,757	+		GFF4266	0.14	-2.6
4,280,768	+		GFF4266	0.20	+0.8
4,280,768	-		GFF4266	0.20	-0.3
4,280,768	-		GFF4266	0.20	-1.4
4,280,787	+		GFF4266	0.31	-0.9
4,280,822	-		GFF4266	0.51	-0.1
4,280,845	-		GFF4266	0.64	-1.9
4,280,849	+		GFF4266	0.67	-1.6
4,280,851	-		GFF4266	0.68	+0.8
4,280,854	+		GFF4266	0.70	-0.9
4,280,861	+		GFF4266	0.74	-0.1
4,280,861	+		GFF4266	0.74	-1.0
4,280,861	+		GFF4266	0.74	+1.1
4,280,861	+		GFF4266	0.74	-2.9
4,280,869	-		GFF4266	0.78	-0.4
4,280,869	-		GFF4266	0.78	-0.1
4,280,869	-		GFF4266	0.78	-1.5
4,280,869	-		GFF4266	0.78	+0.4
4,280,869	-		GFF4266	0.78	+0.4
4,280,869	-		GFF4266	0.78	-1.3
4,280,869	-		GFF4266	0.78	-1.0
4,280,869	-		GFF4266	0.78	-1.3
4,280,869	-		GFF4266	0.78	-0.1
4,280,869	-		GFF4266	0.78	+1.2
4,280,869	-		GFF4266	0.78	+1.3
4,280,869	-		GFF4266	0.78	-1.0
4,280,869	-		GFF4266	0.78	-2.6
4,280,880	-		GFF4266	0.84	-0.5
4,280,891	-				+0.5
4,280,893	-				+0.0
4,280,893	-				+0.5
4,280,901	-				+0.4
4,280,904	+				-2.0
4,280,940	+				-1.3
4,280,999	+				+1.1
4,280,999	+				-1.3
4,280,999	+				-0.2
4,280,999	+				-0.8
4,280,999	+				-0.7
4,280,999	+				-0.7
4,280,999	+				-0.2
4,280,999	+				+0.6
4,280,999	+				-0.4
4,280,999	+				-2.6
4,280,999	+				-0.5
4,280,999	+				+0.5
4,280,999	+				-1.0
4,280,999	+				-0.7
4,280,999	+				-2.5
4,280,999	+				-2.0
4,280,999	+				+1.2
4,280,999	+				-1.2
4,280,999	+				+0.6
4,280,999	+				+0.3
4,280,999	+				-2.1
4,280,999	+				-1.1
4,280,999	+				-0.6
4,280,999	+				-1.2
4,280,999	+				+0.2
4,280,999	+				-1.6
4,280,999	+				-0.6
4,280,999	+				+0.3
4,280,999	+				-2.2
4,280,999	+				-0.3
4,280,999	+				-1.2
4,281,007	-				+0.6
4,281,007	-				-0.2
4,281,007	-				-1.2
4,281,007	-				+0.5
4,281,007	-				-0.9
4,281,007	-				-0.7
4,281,007	-				+0.2
4,281,007	-				-0.0
4,281,007	-				-0.0
4,281,007	-				+1.1
4,281,007	-				-1.2
4,281,007	-				-0.7
4,281,007	-				-0.9
4,281,007	-				-0.5
4,281,007	-				-0.7
4,281,007	-				-1.1
4,281,007	-				-1.1
4,281,007	-				+1.2
4,281,007	-				+1.4
4,281,007	-				-0.7
4,281,007	-				-0.2
4,281,007	-				-0.0
4,281,007	-				-0.8
4,281,007	-				-0.5
4,281,007	-				-1.5
4,281,007	-				+0.4
4,281,007	-				-0.5
4,281,007	-				+1.4
4,281,021	+				-2.6
4,281,021	+				-1.7
4,281,021	+				+0.5
4,281,021	+				-0.9
4,281,021	+				-2.1
4,281,021	+				-0.3
4,281,021	+				-0.1
4,281,021	+				-0.5
4,281,021	+				+0.2
4,281,021	+				-0.2
4,281,029	-				+0.1
4,281,029	-				-0.2
4,281,029	-				-0.1
4,281,029	-				-0.7
4,281,029	-				-0.2
4,281,029	-				-1.9
4,281,029	-				+0.1
4,281,029	-				-1.8
4,281,029	-				+0.1
4,281,029	-				+0.2
4,281,029	-				-1.5
4,281,041	+				+0.4
4,281,049	-				+0.6
4,281,063	-				-1.9
4,281,104	+				+0.6
4,281,104	+				+0.2
4,281,104	+				-1.9
4,281,112	-				-0.9
4,281,112	-				-1.6
4,281,112	-				-0.7
4,281,112	-				-0.4
4,281,112	-				-2.2
4,281,112	-				-1.7
4,281,112	-				-0.1
4,281,112	-				-0.6
4,281,131	+				+0.4
4,281,150	+		GFF4267	0.10	-0.0
4,281,155	-		GFF4267	0.10	-2.8
4,281,155	-		GFF4267	0.10	-1.1
4,281,155	-		GFF4267	0.10	-1.3
4,281,158	-		GFF4267	0.10	+0.1
4,281,158	-		GFF4267	0.10	-1.1
4,281,168	-		GFF4267	0.11	-0.7
4,281,168	-		GFF4267	0.11	-0.8
4,281,185	+		GFF4267	0.11	-1.1
4,281,185	+		GFF4267	0.11	-1.5
4,281,185	+		GFF4267	0.11	-1.2
4,281,185	+		GFF4267	0.11	-0.1
4,281,188	-		GFF4267	0.12	-0.2
4,281,193	-		GFF4267	0.12	-0.9
4,281,193	-		GFF4267	0.12	+0.2
4,281,193	-		GFF4267	0.12	-0.2
4,281,194	-		GFF4267	0.12	+0.9
4,281,195	+		GFF4267	0.12	-1.3
4,281,199	+		GFF4267	0.12	-0.3
4,281,200	+		GFF4267	0.12	+0.4
4,281,200	+		GFF4267	0.12	+0.4
4,281,200	+		GFF4267	0.12	-0.9
4,281,207	-		GFF4267	0.12	-1.1
4,281,208	-		GFF4267	0.12	-1.6
4,281,208	-		GFF4267	0.12	-1.1
4,281,208	-		GFF4267	0.12	-2.2
4,281,213	-		GFF4267	0.13	+0.4
4,281,224	+		GFF4267	0.13	-0.3
4,281,231	+		GFF4267	0.13	-0.8
4,281,231	+		GFF4267	0.13	-0.9
4,281,232	+		GFF4267	0.13	+0.9
4,281,235	-		GFF4267	0.13	-0.6
4,281,242	+		GFF4267	0.14	+0.1
4,281,242	+		GFF4267	0.14	+0.7
4,281,242	+		GFF4267	0.14	-0.5
4,281,242	+		GFF4267	0.14	-3.3
4,281,242	+		GFF4267	0.14	+1.0
4,281,250	-		GFF4267	0.14	+0.2
4,281,250	-		GFF4267	0.14	+0.5
4,281,250	-		GFF4267	0.14	-2.7
4,281,250	-		GFF4267	0.14	-0.3
4,281,258	+		GFF4267	0.14	+0.5
4,281,279	+		GFF4267	0.15	-0.0
4,281,279	+		GFF4267	0.15	-1.5
4,281,279	+		GFF4267	0.15	+0.7
4,281,287	-		GFF4267	0.15	-0.6
4,281,287	-		GFF4267	0.15	+0.1
4,281,287	-		GFF4267	0.15	-0.6
4,281,287	-		GFF4267	0.15	-1.4
4,281,287	-		GFF4267	0.15	-1.7
4,281,297	+		GFF4267	0.16	-0.7
4,281,297	+		GFF4267	0.16	-3.3
4,281,312	+		GFF4267	0.16	-0.2
4,281,312	+		GFF4267	0.16	+0.5
4,281,320	-		GFF4267	0.17	-0.5
4,281,320	-		GFF4267	0.17	-0.1
4,281,320	-		GFF4267	0.17	+0.1
4,281,320	-		GFF4267	0.17	-0.6
4,281,320	-		GFF4267	0.17	-2.0
4,281,320	-		GFF4267	0.17	-1.5
4,281,320	-		GFF4267	0.17	+0.4
4,281,320	-		GFF4267	0.17	-0.4
4,281,348	-		GFF4267	0.18	-1.0
4,281,385	-		GFF4267	0.19	+0.4
4,281,386	+		GFF4267	0.19	+0.1
4,281,386	+		GFF4267	0.19	-0.6
4,281,480	+		GFF4267	0.23	-0.7
4,281,480	+		GFF4267	0.23	+0.2
4,281,490	+		GFF4267	0.24	-0.5
4,281,495	+		GFF4267	0.24	+0.3
4,281,498	-		GFF4267	0.24	-1.1
4,281,512	-		GFF4267	0.24	-0.0
4,281,512	-		GFF4267	0.24	-1.8
4,281,521	+		GFF4267	0.25	+0.7
4,281,535	+		GFF4267	0.25	-2.0
4,281,545	+		GFF4267	0.26	+0.3
4,281,545	+		GFF4267	0.26	+0.1
4,281,545	+		GFF4267	0.26	-0.5
4,281,545	+		GFF4267	0.26	-1.0
4,281,545	+		GFF4267	0.26	-2.1
4,281,550	+		GFF4267	0.26	-0.9
4,281,550	+		GFF4267	0.26	+0.3
4,281,553	-		GFF4267	0.26	+0.9
4,281,553	-		GFF4267	0.26	-1.0
4,281,553	-		GFF4267	0.26	+0.1
4,281,553	-		GFF4267	0.26	+0.0
4,281,553	-		GFF4267	0.26	+1.0
4,281,553	-		GFF4267	0.26	-0.8
4,281,557	+		GFF4267	0.26	+0.1
4,281,558	-		GFF4267	0.26	-0.1
4,281,558	-		GFF4267	0.26	-1.2
4,281,562	+		GFF4267	0.26	-0.1
4,281,563	-		GFF4267	0.27	-1.2
4,281,563	-		GFF4267	0.27	-1.9
4,281,567	+		GFF4267	0.27	-0.9
4,281,593	+		GFF4267	0.28	+0.5
4,281,600	-		GFF4267	0.28	-1.1
4,281,602	+		GFF4267	0.28	+0.2
4,281,602	+		GFF4267	0.28	-1.5
4,281,602	+		GFF4267	0.28	-0.6
4,281,602	+		GFF4267	0.28	-0.8
4,281,602	+		GFF4267	0.28	-0.7
4,281,602	+		GFF4267	0.28	+0.3
4,281,602	+		GFF4267	0.28	+0.4
4,281,602	+		GFF4267	0.28	-0.0
4,281,602	+		GFF4267	0.28	-0.5
4,281,602	+		GFF4267	0.28	-0.3
4,281,602	+		GFF4267	0.28	+0.4
4,281,602	+		GFF4267	0.28	-2.0
4,281,602	+		GFF4267	0.28	-0.8
4,281,602	+		GFF4267	0.28	+0.5
4,281,604	+		GFF4267	0.28	-1.8
4,281,607	+		GFF4267	0.28	-1.7
4,281,610	-		GFF4267	0.28	-1.4
4,281,610	-		GFF4267	0.28	-1.8
4,281,610	-		GFF4267	0.28	+0.7
4,281,610	-		GFF4267	0.28	-1.4
4,281,610	-		GFF4267	0.28	-1.2
4,281,610	-		GFF4267	0.28	+0.2
4,281,610	-		GFF4267	0.28	+0.6
4,281,612	+		GFF4267	0.28	+0.6
4,281,614	+		GFF4267	0.29	-1.5
4,281,615	-		GFF4267	0.29	-1.1
4,281,620	-		GFF4267	0.29	-0.8
4,281,620	-		GFF4267	0.29	-1.0
4,281,622	-		GFF4267	0.29	-0.3
4,281,622	-		GFF4267	0.29	+0.3
4,281,625	-		GFF4267	0.29	-0.1
4,281,627	+		GFF4267	0.29	-0.1
4,281,627	+		GFF4267	0.29	+0.4
4,281,635	-		GFF4267	0.29	-1.9
4,281,644	-		GFF4267	0.30	-1.3
4,281,653	-		GFF4267	0.30	-0.9
4,281,660	+		GFF4267	0.30	-1.5
4,281,676	+		GFF4267	0.31	-0.9
4,281,676	+		GFF4267	0.31	-1.1
4,281,684	-		GFF4267	0.31	-0.8
4,281,703	+		GFF4267	0.32	-0.8
4,281,710	+		GFF4267	0.32	-2.0
4,281,717	-		GFF4267	0.33	-0.2
4,281,718	-		GFF4267	0.33	+1.0
4,281,740	+		GFF4267	0.34	+0.3
4,281,748	-		GFF4267	0.34	-0.9
4,281,766	+		GFF4267	0.35	-1.0
4,281,768	+		GFF4267	0.35	+0.3
4,281,768	+		GFF4267	0.35	-0.3
4,281,774	-		GFF4267	0.35	-2.6
4,281,774	-		GFF4267	0.35	-1.8
4,281,776	+		GFF4267	0.35	-1.0
4,281,776	+		GFF4267	0.35	-1.0
4,281,776	-		GFF4267	0.35	-3.6
4,281,781	+		GFF4267	0.35	+0.7
4,281,781	+		GFF4267	0.35	+0.1
4,281,781	+		GFF4267	0.35	-0.3
4,281,784	-		GFF4267	0.35	+0.2
4,281,786	+		GFF4267	0.35	-0.6
4,281,789	-		GFF4267	0.36	-0.4
4,281,794	-		GFF4267	0.36	-0.4
4,281,794	-		GFF4267	0.36	-1.3
4,281,796	+		GFF4267	0.36	+0.1
4,281,804	-		GFF4267	0.36	-1.1
4,281,840	-		GFF4267	0.38	-0.9
4,281,858	+		GFF4267	0.38	-0.3
4,281,858	+		GFF4267	0.38	+0.2
4,281,866	-		GFF4267	0.39	-0.1
4,281,867	-		GFF4267	0.39	-0.7
4,281,872	-		GFF4267	0.39	-0.2
4,281,872	-		GFF4267	0.39	-0.6
4,281,887	-		GFF4267	0.39	-0.3
4,281,902	-		GFF4267	0.40	-2.0