Strain Fitness in Sphingobium sp. HT1-2 around GFF3826

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
3,865,564	-		GFF3825	0.46	-1.9
3,865,564	-		GFF3825	0.46	+0.5
3,865,570	-		GFF3825	0.46	-1.4
3,865,572	+		GFF3825	0.46	+0.0
3,865,572	+		GFF3825	0.46	-0.8
3,865,595	+		GFF3825	0.48	+0.3
3,865,603	-		GFF3825	0.48	-0.8
3,865,618	-		GFF3825	0.49	-0.5
3,865,621	+		GFF3825	0.49	+0.4
3,865,629	-		GFF3825	0.50	-1.8
3,865,644	+		GFF3825	0.51	-0.6
3,865,651	+		GFF3825	0.51	+0.2
3,865,653	+		GFF3825	0.51	-1.1
3,865,666	+		GFF3825	0.52	-0.6
3,865,695	+		GFF3825	0.54	-0.3
3,865,703	-		GFF3825	0.54	-1.6
3,865,705	+		GFF3825	0.55	-1.6
3,865,705	+		GFF3825	0.55	-0.1
3,865,705	+		GFF3825	0.55	+0.4
3,865,705	+		GFF3825	0.55	-1.7
3,865,705	+		GFF3825	0.55	-1.0
3,865,705	+		GFF3825	0.55	-0.7
3,865,713	-		GFF3825	0.55	-0.3
3,865,713	-		GFF3825	0.55	-0.5
3,865,715	+		GFF3825	0.55	+0.2
3,865,723	-		GFF3825	0.56	+0.2
3,865,725	-		GFF3825	0.56	+0.2
3,865,737	+		GFF3825	0.57	+0.9
3,865,749	-		GFF3825	0.57	-0.3
3,865,760	-		GFF3825	0.58	-2.8
3,865,767	+		GFF3825	0.58	-1.0
3,865,767	+		GFF3825	0.58	+0.1
3,865,767	+		GFF3825	0.58	-1.3
3,865,767	+		GFF3825	0.58	-0.7
3,865,767	+		GFF3825	0.58	-0.8
3,865,767	+		GFF3825	0.58	-1.5
3,865,767	+		GFF3825	0.58	-1.1
3,865,767	+		GFF3825	0.58	+0.1
3,865,767	+		GFF3825	0.58	-2.0
3,865,767	+		GFF3825	0.58	-1.1
3,865,771	-		GFF3825	0.59	+0.6
3,865,775	-		GFF3825	0.59	-0.4
3,865,775	-		GFF3825	0.59	-1.2
3,865,775	-		GFF3825	0.59	+0.4
3,865,775	-		GFF3825	0.59	+0.9
3,865,786	-		GFF3825	0.60	-1.4
3,865,794	+		GFF3825	0.60	+0.4
3,865,794	+		GFF3825	0.60	-1.2
3,865,794	+		GFF3825	0.60	-0.2
3,865,794	+		GFF3825	0.60	+0.7
3,865,794	+		GFF3825	0.60	-1.0
3,865,802	-		GFF3825	0.61	-0.4
3,865,802	-		GFF3825	0.61	-0.7
3,865,809	+		GFF3825	0.61	-1.8
3,865,809	+		GFF3825	0.61	-1.6
3,865,817	-		GFF3825	0.62	-1.2
3,865,836	+		GFF3825	0.63	-1.1
3,865,842	+		GFF3825	0.63	-0.1
3,865,881	+		GFF3825	0.66	-0.8
3,865,894	+		GFF3825	0.66	+0.8
3,865,894	+		GFF3825	0.66	+0.7
3,865,914	+		GFF3825	0.68	-1.8
3,865,914	+		GFF3825	0.68	+0.5
3,865,914	+		GFF3825	0.68	+0.8
3,865,914	+		GFF3825	0.68	-1.1
3,865,922	-		GFF3825	0.68	-0.1
3,865,922	-		GFF3825	0.68	+0.1
3,865,922	-		GFF3825	0.68	+1.2
3,865,922	-		GFF3825	0.68	-1.2
3,865,922	-		GFF3825	0.68	+1.2
3,865,922	-		GFF3825	0.68	-1.6
3,865,922	-		GFF3825	0.68	-0.2
3,865,928	+		GFF3825	0.69	+0.5
3,865,936	+		GFF3825	0.69	-1.3
3,865,936	-		GFF3825	0.69	-2.0
3,865,936	-		GFF3825	0.69	-0.5
3,865,938	-		GFF3825	0.69	+0.8
3,865,940	-		GFF3825	0.69	+0.9
3,865,940	-		GFF3825	0.69	-1.3
3,865,947	+		GFF3825	0.70	-0.5
3,865,953	-		GFF3825	0.70	+0.8
3,865,953	-		GFF3825	0.70	-0.4
3,865,960	+		GFF3825	0.71	-0.5
3,865,985	+		GFF3825	0.72	+0.1
3,866,003	+		GFF3825	0.73	+0.6
3,866,010	-		GFF3825	0.74	+0.5
3,866,013	+		GFF3825	0.74	-1.5
3,866,013	+		GFF3825	0.74	+0.7
3,866,022	+		GFF3825	0.74	-0.6
3,866,032	-		GFF3825	0.75	-1.2
3,866,032	-		GFF3825	0.75	-1.0
3,866,049	-		GFF3825	0.76	-0.4
3,866,074	+		GFF3825	0.78	-1.5
3,866,077	-		GFF3825	0.78	-1.1
3,866,091	-		GFF3825	0.79	-0.3
3,866,104	+		GFF3825	0.80	-0.9
3,866,104	+		GFF3825	0.80	-0.8
3,866,112	-		GFF3825	0.80	-1.4
3,866,112	-		GFF3825	0.80	+0.9
3,866,132	-		GFF3825	0.81	+0.1
3,866,145	+		GFF3825	0.82	-0.7
3,866,154	-		GFF3825	0.83	-0.1
3,866,154	-		GFF3825	0.83	-0.8
3,866,154	-		GFF3825	0.83	-0.2
3,866,161	+		GFF3825	0.83	-1.1
3,866,169	-		GFF3825	0.84	-1.0
3,866,180	+		GFF3825	0.84	-0.4
3,866,182	+		GFF3825	0.84	-0.0
3,866,182	+		GFF3825	0.84	-0.0
3,866,182	+		GFF3825	0.84	-1.4
3,866,182	+		GFF3825	0.84	-0.6
3,866,182	+		GFF3825	0.84	-0.6
3,866,182	+		GFF3825	0.84	+1.0
3,866,182	+		GFF3825	0.84	-2.3
3,866,182	+		GFF3825	0.84	+0.6
3,866,182	+		GFF3825	0.84	-1.4
3,866,182	+		GFF3825	0.84	+0.3
3,866,182	+		GFF3825	0.84	+0.6
3,866,185	-		GFF3825	0.85	+0.6
3,866,188	-		GFF3825	0.85	+0.1
3,866,190	-		GFF3825	0.85	+0.2
3,866,190	-		GFF3825	0.85	-2.5
3,866,190	-		GFF3825	0.85	-1.1
3,866,190	-		GFF3825	0.85	+1.0
3,866,190	-		GFF3825	0.85	-2.2
3,866,190	-		GFF3825	0.85	+0.3
3,866,190	-		GFF3825	0.85	-1.9
3,866,190	-		GFF3825	0.85	+0.4
3,866,190	-		GFF3825	0.85	-0.5
3,866,190	-		GFF3825	0.85	-1.8
3,866,190	-		GFF3825	0.85	+1.3
3,866,203	-		GFF3825	0.86	+0.0
3,866,204	+		GFF3825	0.86	-0.2
3,866,204	+		GFF3825	0.86	+0.8
3,866,204	+		GFF3825	0.86	+0.9
3,866,204	+		GFF3825	0.86	+0.7
3,866,204	+		GFF3825	0.86	+0.9
3,866,204	+		GFF3825	0.86	+1.7
3,866,204	+		GFF3825	0.86	+0.4
3,866,204	+		GFF3825	0.86	+0.6
3,866,204	+		GFF3825	0.86	-1.4
3,866,204	+		GFF3825	0.86	-2.0
3,866,204	+		GFF3825	0.86	-1.9
3,866,204	+		GFF3825	0.86	+0.5
3,866,204	+		GFF3825	0.86	+1.5
3,866,204	+		GFF3825	0.86	+0.5
3,866,204	+		GFF3825	0.86	-2.3
3,866,212	-		GFF3825	0.86	-1.4
3,866,212	-		GFF3825	0.86	+0.1
3,866,212	-		GFF3825	0.86	-0.7
3,866,212	-		GFF3825	0.86	+0.5
3,866,212	-		GFF3825	0.86	-1.2
3,866,212	-		GFF3825	0.86	-2.1
3,866,212	-		GFF3825	0.86	+0.2
3,866,212	-		GFF3825	0.86	+0.5
3,866,212	-		GFF3825	0.86	+0.0
3,866,212	-		GFF3825	0.86	-1.1
3,866,214	+		GFF3825	0.86	-1.0
3,866,222	-		GFF3825	0.87	+0.7
3,866,263	+		GFF3825	0.89	-0.1
3,866,280	+				-0.5
3,866,286	+				-0.2
3,866,294	-				+1.3
3,866,320	+				-1.3
3,866,320	+				-1.4
3,866,330	-				-0.3
3,866,348	+				+0.2
3,866,355	-				-0.2
3,866,355	-				+0.7
3,866,356	-				-1.4
3,866,377	+				-1.0
3,866,390	+				+0.2
3,866,399	+				-0.0
3,866,407	-				-0.1
3,866,409	+				-1.0
3,866,423	-				-1.0
3,866,425	+				-1.0
3,866,434	-				-1.8
3,866,458	+				+0.3
3,866,459	-				-0.1
3,866,466	-				-0.6
3,866,466	-				+1.5
3,866,471	-				-0.4
3,866,518	+				-0.4
3,866,518	+				+0.3
3,866,518	+				+1.4
3,866,518	+				-1.3
3,866,518	+				-0.4
3,866,518	+				-1.0
3,866,526	-				-0.2
3,866,526	-				+0.6
3,866,526	-				-1.6
3,866,526	-				+0.7
3,866,526	-				-1.6
3,866,526	-				+0.3
3,866,526	-				+0.8
3,866,526	-				-1.4
3,866,526	-				-1.6
3,866,526	-				-1.4
3,866,526	-				-0.6
3,866,528	-				-1.0
3,866,528	-				-1.5
3,866,530	+				+0.7
3,866,535	+				-0.3
3,866,535	+				-0.3
3,866,536	+				+0.3
3,866,575	+				-1.1
3,866,594	+		GFF3826	0.12	-0.7
3,866,594	+		GFF3826	0.12	-0.2
3,866,594	+		GFF3826	0.12	-0.2
3,866,594	+		GFF3826	0.12	-1.0
3,866,602	-		GFF3826	0.14	-0.5
3,866,602	-		GFF3826	0.14	+0.5
3,866,602	-		GFF3826	0.14	-1.1
3,866,602	-		GFF3826	0.14	+0.4
3,866,621	+		GFF3826	0.20	-1.8
3,866,627	+		GFF3826	0.22	+0.6
3,866,635	-		GFF3826	0.25	+2.0
3,866,635	-		GFF3826	0.25	+0.1
3,866,638	+		GFF3826	0.25	-1.0
3,866,645	-		GFF3826	0.28	-1.5
3,866,680	+		GFF3826	0.39	-0.5
3,866,680	+		GFF3826	0.39	+0.5
3,866,688	-		GFF3826	0.41	-1.5
3,866,688	-		GFF3826	0.41	-0.7
3,866,701	-		GFF3826	0.45	-1.2
3,866,703	+		GFF3826	0.46	-0.6
3,866,703	+		GFF3826	0.46	-0.0
3,866,711	-		GFF3826	0.48	-1.2
3,866,716	+		GFF3826	0.50	-0.6
3,866,727	-		GFF3826	0.53	-0.2
3,866,743	+		GFF3826	0.58	-0.9
3,866,795	-		GFF3826	0.75	+0.4
3,866,826	-		GFF3826	0.85	-0.6
3,866,847	-				-0.0
3,866,849	-				+0.1
3,866,853	+				-1.8
3,866,853	+				+0.6
3,866,853	+				+0.8
3,866,853	+				-0.5
3,866,861	-				-1.6
3,866,861	-				-0.3
3,866,900	+				-1.2
3,866,916	+				-1.9
3,867,856	+				-0.4
3,867,856	+				-0.4
3,867,856	+				-1.3
3,867,864	-				-0.9