Strain Fitness in Sphingobium sp. HT1-2 around GFF2715

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,735,463	+				-0.2
2,735,463	+				-0.7
2,735,471	-				-0.3
2,735,491	-				+1.0
2,735,496	-				+1.4
2,735,511	+				-0.4
2,735,521	+				-0.0
2,735,529	-				-1.5
2,735,529	-				+1.2
2,735,543	-				+0.2
2,735,587	+				-0.0
2,735,587	+				-1.1
2,735,587	+				-0.2
2,735,589	+				-1.5
2,735,595	+				-1.3
2,735,595	-				-0.9
2,735,595	-				-1.7
2,735,635	-				+0.6
2,735,654	+				-1.4
2,735,676	-				-0.2
2,735,676	-				-1.1
2,735,688	-				+2.5
2,735,689	-				-0.2
2,735,708	+		GFF2714	0.12	-0.8
2,735,746	+		GFF2714	0.19	-1.3
2,735,751	+		GFF2714	0.20	+0.2
2,735,758	-		GFF2714	0.22	-0.2
2,735,758	-		GFF2714	0.22	-1.5
2,735,759	-		GFF2714	0.22	-1.8
2,735,775	+		GFF2714	0.25	-0.4
2,735,775	+		GFF2714	0.25	-0.9
2,735,783	-		GFF2714	0.27	-0.2
2,735,783	-		GFF2714	0.27	+1.3
2,735,786	+		GFF2714	0.27	-0.5
2,735,811	-		GFF2714	0.32	+0.8
2,735,831	+		GFF2714	0.36	+1.0
2,735,841	+		GFF2714	0.38	-0.3
2,735,853	+		GFF2714	0.40	-0.3
2,735,853	+		GFF2714	0.40	-1.7
2,735,861	-		GFF2714	0.42	-1.3
2,735,861	-		GFF2714	0.42	-0.9
2,735,861	-		GFF2714	0.42	-1.6
2,735,861	-		GFF2714	0.42	-0.2
2,735,861	-		GFF2714	0.42	-1.2
2,735,861	-		GFF2714	0.42	-0.7
2,735,861	-		GFF2714	0.42	+0.1
2,735,861	-		GFF2714	0.42	-0.8
2,735,861	-		GFF2714	0.42	+1.8
2,735,861	-		GFF2714	0.42	+0.8
2,735,864	+		GFF2714	0.42	-0.4
2,735,864	+		GFF2714	0.42	-0.6
2,735,872	-		GFF2714	0.44	-0.2
2,735,872	-		GFF2714	0.44	-0.9
2,735,872	-		GFF2714	0.44	+0.2
2,735,872	-		GFF2714	0.44	-0.3
2,735,872	-		GFF2714	0.44	+0.8
2,735,872	-		GFF2714	0.44	-1.7
2,735,901	+		GFF2714	0.50	-0.8
2,735,909	+		GFF2714	0.51	+0.9
2,735,909	+		GFF2714	0.51	+0.0
2,735,909	+		GFF2714	0.51	-1.8
2,735,909	+		GFF2714	0.51	-1.3
2,735,909	+		GFF2714	0.51	-1.0
2,735,914	+		GFF2714	0.52	-1.8
2,735,914	+		GFF2714	0.52	-0.4
2,735,914	+		GFF2714	0.52	-0.3
2,735,914	+		GFF2714	0.52	-0.6
2,735,914	+		GFF2714	0.52	-1.1
2,735,917	-		GFF2714	0.53	+0.5
2,735,917	-		GFF2714	0.53	-3.4
2,735,917	-		GFF2714	0.53	-1.9
2,735,917	-		GFF2714	0.53	+1.3
2,735,919	+		GFF2714	0.53	-0.7
2,735,919	+		GFF2714	0.53	-1.0
2,735,922	-		GFF2714	0.54	-1.4
2,735,922	-		GFF2714	0.54	+1.4
2,735,927	-		GFF2714	0.55	-0.2
2,735,927	-		GFF2714	0.55	+0.4
2,735,935	-		GFF2714	0.56	+1.3
2,735,944	+		GFF2714	0.58	-1.6
2,735,945	+		GFF2714	0.58	-1.9
2,735,947	-		GFF2714	0.58	-0.5
2,735,953	-		GFF2714	0.60	-1.3
2,735,972	+		GFF2714	0.63	+0.1
2,735,973	+		GFF2714	0.64	-0.9
2,735,974	+		GFF2714	0.64	+0.2
2,735,977	+		GFF2714	0.64	-0.5
2,735,980	-		GFF2714	0.65	-0.6
2,735,980	-		GFF2714	0.65	-0.5
2,735,980	-		GFF2714	0.65	-0.4
2,735,985	-		GFF2714	0.66	-0.5
2,735,985	-		GFF2714	0.66	+0.7
2,736,022	+		GFF2714	0.73	-0.8
2,736,029	+		GFF2714	0.74	-0.5
2,736,030	-		GFF2714	0.75	-0.9
2,736,032	-		GFF2714	0.75	+1.4
2,736,034	+		GFF2714	0.75	+0.9
2,736,044	-		GFF2714	0.77	-1.6
2,736,103	-		GFF2714	0.89	+0.8
2,736,103	-		GFF2714	0.89	-1.9
2,736,124	+				-1.2
2,736,140	-				+0.3
2,736,146	+				-1.7
2,736,151	+				-1.9
2,736,159	-				-0.1
2,736,227	+				-0.9
2,736,227	+				-0.4
2,736,232	+				-0.6
2,736,232	+				-0.0
2,736,235	-				-1.2
2,736,240	-				+0.1
2,736,245	-				+0.6
2,736,261	-				-0.9
2,736,263	+				+0.2
2,736,273	+				+0.6
2,736,291	+				+0.3
2,736,294	-				-0.6
2,736,298	+				-2.2
2,736,299	-				-0.9
2,736,299	-				-1.0
2,736,299	-				-1.7
2,736,310	+				-0.2
2,736,310	-				-1.7
2,736,311	-				+0.6
2,736,315	-				-1.4
2,736,338	-				-0.7
2,736,338	-				-0.9
2,736,338	-				+0.3
2,736,341	+				-1.6
2,736,345	+				+0.5
2,736,348	-				+0.6
2,736,353	-				-0.3
2,736,381	+				-0.7
2,736,396	+				-0.2
2,736,401	+				-2.2
2,736,421	-				-1.0
2,736,431	-				-1.1
2,736,452	-				-0.9
2,736,452	-				-0.4
2,736,452	-				+0.9
2,736,467	-				-0.3
2,736,469	+				-0.9
2,736,484	-		GFF2715	0.10	+0.5
2,736,494	-		GFF2715	0.12	-0.8
2,736,514	+		GFF2715	0.16	-2.2
2,736,519	+		GFF2715	0.17	-1.3
2,736,522	-		GFF2715	0.18	-1.6
2,736,524	+		GFF2715	0.18	+1.2
2,736,524	+		GFF2715	0.18	-0.1
2,736,526	+		GFF2715	0.18	+0.8
2,736,526	+		GFF2715	0.18	-1.5
2,736,527	-		GFF2715	0.19	-1.3
2,736,527	-		GFF2715	0.19	-0.6
2,736,527	-		GFF2715	0.19	-0.9
2,736,546	+		GFF2715	0.22	+0.8
2,736,582	-		GFF2715	0.29	+1.4
2,736,645	+		GFF2715	0.42	-0.5
2,736,653	-		GFF2715	0.43	-0.5
2,736,658	-		GFF2715	0.44	-0.1
2,736,658	-		GFF2715	0.44	+2.0
2,736,677	-		GFF2715	0.48	-2.3
2,736,706	+		GFF2715	0.54	+0.3
2,736,706	+		GFF2715	0.54	+0.5
2,736,706	+		GFF2715	0.54	-0.3
2,736,706	+		GFF2715	0.54	-0.2
2,736,706	+		GFF2715	0.54	-1.3
2,736,706	+		GFF2715	0.54	-1.0
2,736,706	+		GFF2715	0.54	-0.8
2,736,706	+		GFF2715	0.54	-0.0
2,736,706	+		GFF2715	0.54	+0.7
2,736,706	+		GFF2715	0.54	-1.7
2,736,706	+		GFF2715	0.54	-0.5
2,736,706	+		GFF2715	0.54	+0.8
2,736,706	+		GFF2715	0.54	+0.3
2,736,706	+		GFF2715	0.54	-1.4
2,736,706	+		GFF2715	0.54	-0.6
2,736,706	+		GFF2715	0.54	-1.4
2,736,706	+		GFF2715	0.54	-0.7
2,736,706	+		GFF2715	0.54	-0.7
2,736,706	+		GFF2715	0.54	+0.3
2,736,706	+		GFF2715	0.54	+0.1
2,736,706	+		GFF2715	0.54	-0.7
2,736,706	+		GFF2715	0.54	-2.1
2,736,706	+		GFF2715	0.54	-0.3
2,736,706	+		GFF2715	0.54	-1.4
2,736,706	+		GFF2715	0.54	+0.8
2,736,706	+		GFF2715	0.54	+0.5
2,736,706	+		GFF2715	0.54	-1.1
2,736,706	+		GFF2715	0.54	-0.3
2,736,706	+		GFF2715	0.54	-1.0
2,736,706	+		GFF2715	0.54	-1.8
2,736,706	+		GFF2715	0.54	-1.6
2,736,706	+		GFF2715	0.54	-1.1
2,736,706	+		GFF2715	0.54	-0.1
2,736,706	+		GFF2715	0.54	+1.6
2,736,706	+		GFF2715	0.54	-1.2
2,736,706	+		GFF2715	0.54	-1.7
2,736,706	+		GFF2715	0.54	-1.1
2,736,706	+		GFF2715	0.54	+1.9
2,736,706	+		GFF2715	0.54	+0.7
2,736,706	+		GFF2715	0.54	+0.1
2,736,706	+		GFF2715	0.54	+0.2
2,736,706	+		GFF2715	0.54	-0.4
2,736,714	-		GFF2715	0.55	-0.9
2,736,714	-		GFF2715	0.55	+0.6
2,736,714	-		GFF2715	0.55	+0.6
2,736,714	-		GFF2715	0.55	-1.6
2,736,714	-		GFF2715	0.55	-1.9
2,736,714	-		GFF2715	0.55	+0.3
2,736,714	-		GFF2715	0.55	-0.7
2,736,714	-		GFF2715	0.55	+0.4
2,736,714	-		GFF2715	0.55	-0.3
2,736,714	-		GFF2715	0.55	-0.4
2,736,714	-		GFF2715	0.55	+0.6
2,736,714	-		GFF2715	0.55	+0.4
2,736,714	-		GFF2715	0.55	-1.2
2,736,714	-		GFF2715	0.55	-1.5
2,736,714	-		GFF2715	0.55	-1.0
2,736,714	-		GFF2715	0.55	-0.2
2,736,714	-		GFF2715	0.55	-0.5
2,736,714	-		GFF2715	0.55	-0.5
2,736,714	-		GFF2715	0.55	-1.8
2,736,714	-		GFF2715	0.55	-0.5
2,736,714	-		GFF2715	0.55	+0.0
2,736,714	-		GFF2715	0.55	-0.2
2,736,714	-		GFF2715	0.55	-0.6
2,736,714	-		GFF2715	0.55	-1.2
2,736,714	-		GFF2715	0.55	+0.9
2,736,714	-		GFF2715	0.55	-0.3
2,736,714	-		GFF2715	0.55	-0.9
2,736,714	-		GFF2715	0.55	-0.2
2,736,714	-		GFF2715	0.55	+0.1
2,736,725	+		GFF2715	0.58	-0.1
2,736,725	+		GFF2715	0.58	-1.8
2,736,730	+		GFF2715	0.59	+0.8
2,736,733	-		GFF2715	0.59	-0.5
2,736,735	+		GFF2715	0.60	+0.4
2,736,743	-		GFF2715	0.61	-0.9
2,736,743	-		GFF2715	0.61	+0.6
2,736,757	-		GFF2715	0.64	-0.4
2,736,762	-		GFF2715	0.65	-0.6
2,736,763	-		GFF2715	0.65	-0.1
2,736,766	+		GFF2715	0.66	+0.4
2,736,774	-		GFF2715	0.67	-1.0
2,736,788	+		GFF2715	0.70	-0.2
2,736,809	+		GFF2715	0.74	+0.5
2,736,817	-		GFF2715	0.76	+0.7
2,736,822	-		GFF2715	0.77	-1.6
2,736,822	-		GFF2715	0.77	-0.6
2,736,841	-		GFF2715	0.80	-0.7
2,736,849	-		GFF2715	0.82	-0.7
2,736,869	+		GFF2715	0.86	-1.2
2,736,870	+		GFF2715	0.86	+0.0
2,736,870	+		GFF2715	0.86	-0.4
2,736,878	+		GFF2715	0.88	+0.7
2,736,878	-		GFF2715	0.88	-0.3
2,736,886	-		GFF2715	0.89	+1.0
2,736,902	-				+0.3
2,736,902	-				-0.1
2,736,922	-				-1.3
2,736,983	+				-1.5
2,736,983	+				-0.9
2,736,983	+				+0.7
2,736,983	+				-1.3
2,736,991	-				-0.9
2,736,998	+				-1.4
2,737,001	+				-0.5
2,737,006	-				-0.5
2,737,052	+				-1.7
2,737,075	+				+0.6
2,737,136	-				-0.4
2,737,141	+				+0.0
2,737,141	+				+0.1
2,737,141	+				-1.1
2,737,141	+				-1.4
2,737,141	+				+0.6
2,737,141	+				-0.7
2,737,141	+				-0.3
2,737,141	+				-0.1
2,737,141	+				-0.5
2,737,149	-				+1.2
2,737,149	-				-0.8
2,737,149	-				-0.5
2,737,149	-				+1.2
2,737,149	-				-1.7
2,737,149	-				-1.3
2,737,149	-				-0.8
2,737,183	+		GFF2716	0.12	+0.8
2,737,189	+		GFF2716	0.12	+0.1
2,737,200	+		GFF2716	0.13	-0.5
2,737,200	+		GFF2716	0.13	-1.3
2,737,200	+		GFF2716	0.13	-1.1
2,737,219	+		GFF2716	0.15	+0.4
2,737,257	-		GFF2716	0.19	-0.5
2,737,259	+		GFF2716	0.19	-0.3
2,737,260	+		GFF2716	0.20	-1.2
2,737,265	+		GFF2716	0.20	+0.5
2,737,267	-		GFF2716	0.20	+0.3
2,737,267	-		GFF2716	0.20	-0.3
2,737,267	-		GFF2716	0.20	+0.8
2,737,267	-		GFF2716	0.20	-1.0
2,737,267	-		GFF2716	0.20	+1.1
2,737,267	-		GFF2716	0.20	-0.2
2,737,311	+		GFF2716	0.25	-1.9
2,737,313	+		GFF2716	0.25	-1.5
2,737,314	+		GFF2716	0.25	+1.1
2,737,319	-		GFF2716	0.26	-0.8
2,737,319	-		GFF2716	0.26	-0.3
2,737,337	-		GFF2716	0.27	+0.8
2,737,353	-		GFF2716	0.29	-1.3
2,737,360	+		GFF2716	0.30	-0.1
2,737,374	+		GFF2716	0.31	-0.3
2,737,393	+		GFF2716	0.33	-1.1
2,737,405	+		GFF2716	0.34	-0.2
2,737,441	+		GFF2716	0.38	+0.9
2,737,441	+		GFF2716	0.38	+1.1
2,737,441	+		GFF2716	0.38	-1.6
2,737,444	-		GFF2716	0.38	-1.1
2,737,449	-		GFF2716	0.39	-0.4
2,737,489	+		GFF2716	0.43	-1.4
2,737,489	+		GFF2716	0.43	+0.0
2,737,489	+		GFF2716	0.43	+0.1
2,737,489	+		GFF2716	0.43	-0.4
2,737,489	+		GFF2716	0.43	-1.4
2,737,489	+		GFF2716	0.43	-0.2
2,737,489	+		GFF2716	0.43	-0.2
2,737,489	+		GFF2716	0.43	+0.5
2,737,489	+		GFF2716	0.43	+0.8
2,737,489	+		GFF2716	0.43	+0.9
2,737,489	+		GFF2716	0.43	-1.5
2,737,489	+		GFF2716	0.43	-1.5
2,737,489	+		GFF2716	0.43	+0.9
2,737,489	+		GFF2716	0.43	-0.7
2,737,489	+		GFF2716	0.43	+1.0
2,737,489	+		GFF2716	0.43	-1.1
2,737,490	-		GFF2716	0.43	-0.7
2,737,497	-		GFF2716	0.44	-0.1
2,737,497	-		GFF2716	0.44	-1.5
2,737,497	-		GFF2716	0.44	-0.1
2,737,497	-		GFF2716	0.44	+0.8
2,737,497	-		GFF2716	0.44	-1.1
2,737,497	-		GFF2716	0.44	-1.2
2,737,497	-		GFF2716	0.44	-1.6
2,737,497	-		GFF2716	0.44	-0.9
2,737,497	-		GFF2716	0.44	-0.8
2,737,497	-		GFF2716	0.44	+1.6
2,737,497	-		GFF2716	0.44	-0.8
2,737,497	-		GFF2716	0.44	-0.9
2,737,497	-		GFF2716	0.44	-1.2
2,737,497	-		GFF2716	0.44	-1.1
2,737,497	-		GFF2716	0.44	+1.0
2,737,497	-		GFF2716	0.44	+0.8
2,737,497	-		GFF2716	0.44	-0.2
2,737,497	-		GFF2716	0.44	-0.6
2,737,497	-		GFF2716	0.44	+0.3
2,737,497	-		GFF2716	0.44	-1.1
2,737,497	-		GFF2716	0.44	-1.4
2,737,497	-		GFF2716	0.44	-1.3
2,737,497	-		GFF2716	0.44	-1.4
2,737,497	-		GFF2716	0.44	+0.3
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