Strain Fitness in Sphingobium sp. HT1-2 around GFF2635

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,652,854	-		GFF2634	0.65	-0.5
2,652,895	+		GFF2634	0.67	+0.6
2,652,903	-		GFF2634	0.67	+0.0
2,652,929	+		GFF2634	0.69	-0.2
2,652,929	+		GFF2634	0.69	-0.7
2,652,942	-		GFF2634	0.70	-0.4
2,652,964	+		GFF2634	0.71	+0.3
2,652,970	+		GFF2634	0.71	+0.7
2,652,979	+		GFF2634	0.72	-0.6
2,652,991	+		GFF2634	0.72	+0.6
2,652,991	+		GFF2634	0.72	-0.2
2,653,004	+		GFF2634	0.73	-0.8
2,653,004	+		GFF2634	0.73	-0.3
2,653,077	+		GFF2634	0.77	-0.6
2,653,077	-		GFF2634	0.77	+1.1
2,653,089	-		GFF2634	0.78	-1.2
2,653,090	+		GFF2634	0.78	-1.4
2,653,090	+		GFF2634	0.78	-0.4
2,653,090	+		GFF2634	0.78	+0.1
2,653,098	-		GFF2634	0.78	-1.0
2,653,098	-		GFF2634	0.78	-0.7
2,653,098	-		GFF2634	0.78	-0.4
2,653,106	-		GFF2634	0.79	+0.8
2,653,116	+		GFF2634	0.79	+0.1
2,653,121	+		GFF2634	0.80	-1.4
2,653,121	+		GFF2634	0.80	-0.3
2,653,121	+		GFF2634	0.80	+0.7
2,653,121	+		GFF2634	0.80	-1.2
2,653,121	+		GFF2634	0.80	-0.4
2,653,121	+		GFF2634	0.80	-0.9
2,653,121	+		GFF2634	0.80	-1.4
2,653,121	+		GFF2634	0.80	-0.4
2,653,121	+		GFF2634	0.80	-1.4
2,653,121	+		GFF2634	0.80	+0.0
2,653,129	-		GFF2634	0.80	-1.0
2,653,129	-		GFF2634	0.80	+0.5
2,653,129	-		GFF2634	0.80	+1.3
2,653,129	-		GFF2634	0.80	-0.7
2,653,129	-		GFF2634	0.80	-0.1
2,653,129	-		GFF2634	0.80	-0.1
2,653,129	-		GFF2634	0.80	+1.3
2,653,129	-		GFF2634	0.80	-0.9
2,653,129	-		GFF2634	0.80	-1.5
2,653,129	-		GFF2634	0.80	-0.3
2,653,129	-		GFF2634	0.80	-1.2
2,653,129	-		GFF2634	0.80	-1.4
2,653,129	-		GFF2634	0.80	-0.7
2,653,145	+		GFF2634	0.81	-1.3
2,653,147	-		GFF2634	0.81	+0.1
2,653,164	+		GFF2634	0.82	-1.3
2,653,169	+		GFF2634	0.82	-0.3
2,653,169	+		GFF2634	0.82	-1.5
2,653,177	-		GFF2634	0.83	+0.1
2,653,177	-		GFF2634	0.83	-0.3
2,653,184	+		GFF2634	0.83	-1.4
2,653,201	-		GFF2634	0.84	-1.1
2,653,227	-		GFF2634	0.85	-0.6
2,653,231	+		GFF2634	0.86	-1.1
2,653,247	-		GFF2634	0.87	-0.2
2,653,273	+		GFF2634	0.88	-0.3
2,653,273	+		GFF2634	0.88	-0.4
2,653,273	+		GFF2634	0.88	-0.6
2,653,273	+		GFF2634	0.88	-0.7
2,653,273	+		GFF2634	0.88	+0.1
2,653,273	+		GFF2634	0.88	-0.7
2,653,281	-		GFF2634	0.88	+0.3
2,653,281	-		GFF2634	0.88	-0.5
2,653,281	-		GFF2634	0.88	+0.0
2,653,281	-		GFF2634	0.88	-0.3
2,653,281	-		GFF2634	0.88	-0.3
2,653,297	+		GFF2634	0.89	-0.3
2,653,314	+				-0.6
2,653,317	-				-1.7
2,653,319	+				-0.8
2,653,322	-				-0.8
2,653,322	-				-0.9
2,653,322	-				+0.4
2,653,337	+				-1.3
2,653,337	+				-1.8
2,653,339	+				-0.3
2,653,339	+				-1.2
2,653,347	-				+0.4
2,653,347	-				-0.7
2,653,351	+				-0.2
2,653,355	-				-0.2
2,653,370	+				-0.5
2,653,385	+				-0.8
2,653,399	+				+0.8
2,653,399	+				-0.9
2,653,399	+				+2.3
2,653,399	+				-1.1
2,653,407	-				-0.8
2,653,409	+				-0.9
2,653,409	+				-0.4
2,653,417	-				-0.6
2,653,417	-				-1.4
2,653,432	+				-0.9
2,653,432	+				-1.4
2,653,440	-				-0.3
2,653,458	-				+0.1
2,653,458	-				-0.6
2,653,458	-				-0.1
2,653,484	+				-0.5
2,653,490	+				-1.9
2,653,498	+				-0.8
2,653,506	-				+1.2
2,653,520	+				-0.3
2,653,528	-				-0.7
2,653,533	+				+0.5
2,653,543	+				-1.1
2,653,543	+				-1.5
2,653,543	+				-1.2
2,653,551	+				-2.1
2,653,551	-				+0.9
2,653,552	-				+0.0
2,653,575	+				-1.4
2,653,575	+				-0.8
2,653,583	-				-1.0
2,653,585	-				+0.0
2,653,585	-				-0.4
2,653,585	-				-1.6
2,653,585	-				-1.5
2,653,600	+				-0.7
2,653,600	+				-0.3
2,653,623	+				-2.4
2,653,631	-				-0.5
2,653,667	-				-0.3
2,653,717	-				-0.9
2,653,746	-				+0.7
2,653,752	+				-0.7
2,653,796	-				-0.2
2,653,807	+				-0.4
2,653,812	+				+0.1
2,653,819	-				+0.1
2,653,820	+				+0.8
2,653,820	+				-1.0
2,653,820	+				-0.4
2,653,820	+				-0.2
2,653,822	-				-1.9
2,653,832	+				+0.7
2,653,842	+				-0.2
2,653,850	-				-1.1
2,653,850	-				-0.6
2,653,862	+				-0.2
2,653,887	+				-0.5
2,653,902	-				-1.1
2,653,912	+				-1.5
2,653,936	-				+0.2
2,653,946	+				-0.4
2,653,946	+				-2.4
2,653,946	+				-1.3
2,653,954	-				-1.3
2,653,955	-				-0.1
2,653,980	+				-0.3
2,653,980	+				-1.3
2,653,980	+				+0.2
2,653,980	+				+0.0
2,653,980	+				-1.1
2,653,980	+				-0.6
2,653,980	+				+0.9
2,653,980	+				-1.4
2,653,980	+				-0.2
2,653,980	+				+0.6
2,653,980	+				-0.3
2,653,980	+				-1.7
2,653,980	+				-1.1
2,653,980	+				-2.0
2,653,980	+				-0.3
2,653,980	+				+1.7
2,653,980	+				+1.6
2,653,980	+				+1.8
2,653,986	+		GFF2635	0.10	-0.4
2,653,988	-		GFF2635	0.10	-0.2
2,653,988	-		GFF2635	0.10	-0.6
2,653,988	-		GFF2635	0.10	-0.2
2,653,988	-		GFF2635	0.10	-1.0
2,653,988	-		GFF2635	0.10	-0.7
2,653,988	-		GFF2635	0.10	-1.6
2,653,988	-		GFF2635	0.10	+0.5
2,653,988	-		GFF2635	0.10	+0.6
2,653,988	-		GFF2635	0.10	-2.2
2,653,988	-		GFF2635	0.10	-0.8
2,653,991	+		GFF2635	0.11	+0.6
2,653,991	+		GFF2635	0.11	-0.4
2,653,991	+		GFF2635	0.11	-2.4
2,653,994	-		GFF2635	0.11	-1.3
2,653,999	-		GFF2635	0.11	-0.2
2,653,999	-		GFF2635	0.11	-1.3
2,653,999	-		GFF2635	0.11	-0.1
2,654,037	+		GFF2635	0.13	-0.6
2,654,037	+		GFF2635	0.13	+0.1
2,654,037	+		GFF2635	0.13	-0.2
2,654,037	+		GFF2635	0.13	+0.6
2,654,039	+		GFF2635	0.14	-1.4
2,654,045	-		GFF2635	0.14	+0.6
2,654,047	-		GFF2635	0.14	-2.5
2,654,058	-		GFF2635	0.15	+0.7
2,654,068	-		GFF2635	0.15	+0.5
2,654,069	+		GFF2635	0.15	+0.1
2,654,073	-		GFF2635	0.16	+0.7
2,654,077	-		GFF2635	0.16	-2.5
2,654,111	+		GFF2635	0.18	-1.4
2,654,119	-		GFF2635	0.19	+1.1
2,654,121	+		GFF2635	0.19	-1.2
2,654,121	+		GFF2635	0.19	-0.9
2,654,121	+		GFF2635	0.19	-1.3
2,654,121	+		GFF2635	0.19	-1.0
2,654,121	-		GFF2635	0.19	-0.9
2,654,129	+		GFF2635	0.19	-0.4
2,654,129	-		GFF2635	0.19	-0.4
2,654,129	-		GFF2635	0.19	+0.1
2,654,134	+		GFF2635	0.20	-1.7
2,654,153	+		GFF2635	0.21	+0.3
2,654,166	-		GFF2635	0.22	+1.0
2,654,168	-		GFF2635	0.22	-0.9
2,654,170	-		GFF2635	0.22	+0.9
2,654,177	+		GFF2635	0.22	-0.6
2,654,177	+		GFF2635	0.22	-0.3
2,654,177	+		GFF2635	0.22	-1.0
2,654,185	-		GFF2635	0.23	+1.6
2,654,185	-		GFF2635	0.23	-1.0
2,654,185	-		GFF2635	0.23	+0.5
2,654,194	-		GFF2635	0.23	-1.1
2,654,200	-		GFF2635	0.24	-0.2
2,654,206	+		GFF2635	0.24	-1.3
2,654,215	-		GFF2635	0.25	-0.4
2,654,222	-		GFF2635	0.25	-0.7
2,654,245	+		GFF2635	0.26	-1.3
2,654,252	+		GFF2635	0.27	-0.2
2,654,257	-		GFF2635	0.27	+0.3
2,654,274	+		GFF2635	0.28	-2.2
2,654,282	+		GFF2635	0.29	+0.6
2,654,293	+		GFF2635	0.30	-0.5
2,654,293	+		GFF2635	0.30	-2.3
2,654,301	-		GFF2635	0.30	-1.0
2,654,303	+		GFF2635	0.30	+0.4
2,654,303	+		GFF2635	0.30	-1.5
2,654,311	-		GFF2635	0.31	-0.3
2,654,319	-		GFF2635	0.31	-1.0
2,654,322	+		GFF2635	0.31	-1.5
2,654,334	+		GFF2635	0.32	-1.4
2,654,334	+		GFF2635	0.32	-0.4
2,654,370	+		GFF2635	0.34	-1.1
2,654,370	+		GFF2635	0.34	-0.1
2,654,380	+		GFF2635	0.35	-1.2
2,654,388	+		GFF2635	0.35	-0.3
2,654,388	-		GFF2635	0.35	-1.0
2,654,388	-		GFF2635	0.35	-1.1
2,654,388	-		GFF2635	0.35	+0.8
2,654,390	+		GFF2635	0.36	-0.3
2,654,390	+		GFF2635	0.36	-0.4
2,654,390	+		GFF2635	0.36	+0.6
2,654,390	+		GFF2635	0.36	-0.8
2,654,390	+		GFF2635	0.36	-1.1
2,654,390	+		GFF2635	0.36	-0.5
2,654,398	-		GFF2635	0.36	-0.3
2,654,398	-		GFF2635	0.36	-1.4
2,654,398	-		GFF2635	0.36	-1.0
2,654,398	-		GFF2635	0.36	-1.2
2,654,398	-		GFF2635	0.36	-1.3
2,654,398	-		GFF2635	0.36	+0.7
2,654,398	-		GFF2635	0.36	+0.8
2,654,398	-		GFF2635	0.36	+1.4
2,654,403	+		GFF2635	0.36	-1.3
2,654,411	+		GFF2635	0.37	+0.4
2,654,411	+		GFF2635	0.37	-1.1
2,654,419	-		GFF2635	0.37	+0.3
2,654,421	+		GFF2635	0.38	+0.6
2,654,472	+		GFF2635	0.41	-0.3
2,654,472	+		GFF2635	0.41	-1.8
2,654,472	+		GFF2635	0.41	+0.1
2,654,478	+		GFF2635	0.41	-1.3
2,654,478	+		GFF2635	0.41	+0.7
2,654,480	-		GFF2635	0.41	+0.7
2,654,480	-		GFF2635	0.41	-1.1
2,654,504	+		GFF2635	0.43	+0.3
2,654,504	+		GFF2635	0.43	+0.4
2,654,504	+		GFF2635	0.43	+0.5
2,654,504	+		GFF2635	0.43	+0.7
2,654,545	+		GFF2635	0.45	-0.8
2,654,553	-		GFF2635	0.46	-2.0
2,654,562	+		GFF2635	0.46	+1.7
2,654,562	+		GFF2635	0.46	-1.7
2,654,562	+		GFF2635	0.46	+0.9
2,654,562	+		GFF2635	0.46	+0.4
2,654,562	+		GFF2635	0.46	-0.6
2,654,570	-		GFF2635	0.47	+0.2
2,654,573	-		GFF2635	0.47	+2.2
2,654,573	-		GFF2635	0.47	-0.3
2,654,597	+		GFF2635	0.49	+0.7
2,654,605	-		GFF2635	0.49	+0.8
2,654,605	-		GFF2635	0.49	-0.6
2,654,605	-		GFF2635	0.49	+1.2
2,654,605	-		GFF2635	0.49	-0.9
2,654,609	-		GFF2635	0.49	+0.8
2,654,619	-		GFF2635	0.50	-1.4
2,654,620	+		GFF2635	0.50	-1.0
2,654,621	-		GFF2635	0.50	-0.6
2,654,628	-		GFF2635	0.51	-0.4
2,654,628	-		GFF2635	0.51	-2.8
2,654,640	-		GFF2635	0.51	+0.9
2,654,659	-		GFF2635	0.52	-1.7
2,654,662	+		GFF2635	0.53	-1.4
2,654,667	+		GFF2635	0.53	+0.1
2,654,685	+		GFF2635	0.54	-1.4
2,654,685	+		GFF2635	0.54	+1.4
2,654,693	-		GFF2635	0.55	-0.4
2,654,695	+		GFF2635	0.55	+0.5
2,654,695	-		GFF2635	0.55	-0.6
2,654,695	-		GFF2635	0.55	-1.6
2,654,697	+		GFF2635	0.55	-0.1
2,654,697	+		GFF2635	0.55	-0.3
2,654,717	+		GFF2635	0.56	-0.6
2,654,730	+		GFF2635	0.57	-0.4
2,654,730	+		GFF2635	0.57	+0.5
2,654,738	-		GFF2635	0.57	-0.6
2,654,738	-		GFF2635	0.57	-0.8
2,654,738	-		GFF2635	0.57	+0.5
2,654,744	+		GFF2635	0.58	-0.2
2,654,744	+		GFF2635	0.58	-0.4
2,654,791	+		GFF2635	0.61	+0.6
2,654,852	+		GFF2635	0.65	-1.2
2,654,852	+		GFF2635	0.65	-0.0
2,654,923	+		GFF2635	0.69	-0.5
2,654,938	+		GFF2635	0.70	+0.2
2,654,946	-		GFF2635	0.70	+1.1
2,654,946	-		GFF2635	0.70	-1.2
2,654,979	+		GFF2635	0.73	+0.2
2,654,987	-		GFF2635	0.73	-1.7
2,654,989	+		GFF2635	0.73	-0.0
2,654,989	+		GFF2635	0.73	-0.2
2,655,010	+		GFF2635	0.75	-0.0
2,655,015	+		GFF2635	0.75	-0.8
2,655,017	+		GFF2635	0.75	+0.4
2,655,017	+		GFF2635	0.75	-0.5
2,655,017	+		GFF2635	0.75	-0.3
2,655,017	+		GFF2635	0.75	+0.7
2,655,018	+		GFF2635	0.75	-1.0
2,655,018	+		GFF2635	0.75	-1.8
2,655,018	+		GFF2635	0.75	-1.1
2,655,018	+		GFF2635	0.75	-1.1
2,655,018	+		GFF2635	0.75	-0.4
2,655,018	+		GFF2635	0.75	+0.5
2,655,018	+		GFF2635	0.75	-0.2
2,655,018	+		GFF2635	0.75	-0.1
2,655,018	+		GFF2635	0.75	-0.3
2,655,018	+		GFF2635	0.75	-0.4
2,655,018	+		GFF2635	0.75	+0.2
2,655,018	+		GFF2635	0.75	-0.4
2,655,018	+		GFF2635	0.75	-1.3
2,655,018	+		GFF2635	0.75	+1.2
2,655,025	+		GFF2635	0.75	+0.4
2,655,025	-		GFF2635	0.75	+0.7
2,655,025	-		GFF2635	0.75	-0.7
2,655,025	-		GFF2635	0.75	-0.6
2,655,025	-		GFF2635	0.75	-1.1
2,655,025	-		GFF2635	0.75	+0.3
2,655,025	-		GFF2635	0.75	-0.5
2,655,025	-		GFF2635	0.75	+0.0
2,655,025	-		GFF2635	0.75	+0.8
2,655,025	-		GFF2635	0.75	-0.8
2,655,026	-		GFF2635	0.76	-0.5
2,655,026	-		GFF2635	0.76	-0.6
2,655,026	-		GFF2635	0.76	+0.6
2,655,026	-		GFF2635	0.76	-0.5
2,655,026	-		GFF2635	0.76	-1.1
2,655,026	-		GFF2635	0.76	-0.4
2,655,026	-		GFF2635	0.76	-0.8
2,655,026	-		GFF2635	0.76	+0.7
2,655,026	-		GFF2635	0.76	-1.1
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