Strain Fitness in Sphingobium sp. HT1-2 around GFF1845

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,868,505	-				-1.6
1,868,514	+				-0.1
1,868,514	+				-0.6
1,868,514	+				-0.0
1,868,514	+				-0.1
1,868,522	-				-1.2
1,868,524	+				+1.7
1,868,524	+				-0.3
1,868,524	+				-1.1
1,868,524	+				-1.0
1,868,532	-				-2.3
1,868,532	-				-0.6
1,868,532	-				-0.1
1,868,532	-				-2.6
1,868,532	-				-0.7
1,868,570	+				-0.5
1,868,570	+				+0.1
1,868,570	+				-1.8
1,868,570	+				-2.0
1,868,570	+				-1.2
1,868,570	+				-0.6
1,868,570	+				-0.6
1,868,578	-				-0.5
1,868,578	-				-0.3
1,868,578	-				-2.1
1,868,630	+		GFF1844	0.10	-1.0
1,868,641	+		GFF1844	0.11	-2.5
1,868,689	-		GFF1844	0.16	-0.5
1,868,694	-		GFF1844	0.17	+0.6
1,868,700	-		GFF1844	0.17	-1.3
1,868,708	+		GFF1844	0.18	+0.4
1,868,714	+		GFF1844	0.19	+2.3
1,868,714	+		GFF1844	0.19	+0.1
1,868,714	-		GFF1844	0.19	-0.3
1,868,716	+		GFF1844	0.19	-0.1
1,868,748	+		GFF1844	0.22	+0.1
1,868,750	-		GFF1844	0.22	-0.7
1,868,756	-		GFF1844	0.23	-0.7
1,868,757	+		GFF1844	0.23	-2.0
1,868,757	+		GFF1844	0.23	-0.9
1,868,757	+		GFF1844	0.23	+2.4
1,868,767	+		GFF1844	0.24	-1.9
1,868,767	+		GFF1844	0.24	+0.7
1,868,775	-		GFF1844	0.25	-0.5
1,868,775	-		GFF1844	0.25	+0.7
1,868,780	-		GFF1844	0.25	-0.9
1,868,790	-		GFF1844	0.26	-1.9
1,868,797	+		GFF1844	0.27	+0.4
1,868,797	+		GFF1844	0.27	-1.2
1,868,807	+		GFF1844	0.28	-1.3
1,868,828	+		GFF1844	0.30	-1.0
1,868,828	+		GFF1844	0.30	-0.7
1,868,833	+		GFF1844	0.30	-0.9
1,868,836	-		GFF1844	0.31	-0.3
1,868,841	-		GFF1844	0.31	-0.1
1,868,841	-		GFF1844	0.31	+0.9
1,868,841	-		GFF1844	0.31	-1.3
1,868,943	-		GFF1844	0.41	+0.8
1,868,943	-		GFF1844	0.41	+1.9
1,868,948	-		GFF1844	0.42	+0.0
1,868,963	+		GFF1844	0.43	-1.5
1,868,966	+		GFF1844	0.44	-0.6
1,868,968	+		GFF1844	0.44	-1.6
1,868,969	-		GFF1844	0.44	-0.0
1,868,974	-		GFF1844	0.45	-0.3
1,869,018	+		GFF1844	0.49	+0.4
1,869,026	-		GFF1844	0.50	-0.5
1,869,026	-		GFF1844	0.50	-1.8
1,869,026	-		GFF1844	0.50	-1.2
1,869,026	-		GFF1844	0.50	-1.8
1,869,036	+		GFF1844	0.51	-1.6
1,869,036	+		GFF1844	0.51	-0.9
1,869,036	+		GFF1844	0.51	-0.7
1,869,036	+		GFF1844	0.51	-0.4
1,869,036	+		GFF1844	0.51	-1.2
1,869,036	+		GFF1844	0.51	-1.5
1,869,044	-		GFF1844	0.51	+0.4
1,869,044	-		GFF1844	0.51	-0.6
1,869,044	-		GFF1844	0.51	-0.3
1,869,044	-		GFF1844	0.51	+0.6
1,869,044	-		GFF1844	0.51	+0.8
1,869,044	-		GFF1844	0.51	-2.5
1,869,044	-		GFF1844	0.51	-1.0
1,869,044	-		GFF1844	0.51	+0.9
1,869,044	-		GFF1844	0.51	-1.8
1,869,044	-		GFF1844	0.51	-0.3
1,869,044	-		GFF1844	0.51	+0.2
1,869,046	+		GFF1844	0.52	+0.4
1,869,046	-		GFF1844	0.52	-1.8
1,869,055	+		GFF1844	0.53	-0.9
1,869,062	+		GFF1844	0.53	+0.7
1,869,063	+		GFF1844	0.53	+0.8
1,869,063	-		GFF1844	0.53	-1.0
1,869,068	+		GFF1844	0.54	-2.1
1,869,068	+		GFF1844	0.54	-1.0
1,869,081	-		GFF1844	0.55	-1.6
1,869,081	-		GFF1844	0.55	-0.0
1,869,084	+		GFF1844	0.55	+0.7
1,869,090	-		GFF1844	0.56	-0.7
1,869,096	-		GFF1844	0.57	-0.8
1,869,098	+		GFF1844	0.57	-0.3
1,869,135	-		GFF1844	0.61	-0.5
1,869,146	+		GFF1844	0.62	-1.2
1,869,146	+		GFF1844	0.62	-0.7
1,869,146	+		GFF1844	0.62	-0.2
1,869,146	+		GFF1844	0.62	-1.5
1,869,146	+		GFF1844	0.62	+0.8
1,869,146	+		GFF1844	0.62	+0.8
1,869,146	+		GFF1844	0.62	-1.3
1,869,148	-		GFF1844	0.62	+0.7
1,869,154	-		GFF1844	0.62	-0.2
1,869,154	-		GFF1844	0.62	-0.5
1,869,154	-		GFF1844	0.62	+0.2
1,869,154	-		GFF1844	0.62	-1.9
1,869,154	-		GFF1844	0.62	-0.0
1,869,180	+		GFF1844	0.65	-1.6
1,869,182	-		GFF1844	0.65	-0.5
1,869,202	+		GFF1844	0.67	+0.9
1,869,205	-		GFF1844	0.68	-0.6
1,869,242	+		GFF1844	0.71	-0.6
1,869,250	-		GFF1844	0.72	+0.9
1,869,331	+		GFF1844	0.80	+0.4
1,869,336	+		GFF1844	0.81	-0.1
1,869,336	+		GFF1844	0.81	+0.2
1,869,339	-		GFF1844	0.81	-0.2
1,869,363	+		GFF1844	0.83	-0.6
1,869,382	+		GFF1844	0.85	-1.0
1,869,382	+		GFF1844	0.85	-1.5
1,869,382	+		GFF1844	0.85	-1.7
1,869,382	+		GFF1844	0.85	-1.5
1,869,382	+		GFF1844	0.85	+1.4
1,869,382	+		GFF1844	0.85	-0.1
1,869,384	-		GFF1844	0.85	-0.7
1,869,390	-		GFF1844	0.86	-1.2
1,869,390	-		GFF1844	0.86	-0.6
1,869,390	-		GFF1844	0.86	-1.5
1,869,390	-		GFF1844	0.86	+0.8
1,869,390	-		GFF1844	0.86	-0.5
1,869,393	+		GFF1844	0.86	-1.6
1,869,417	+		GFF1844	0.89	-1.9
1,869,428	+		GFF1844	0.90	-0.7
1,869,428	+		GFF1844	0.90	+0.8
1,869,428	+		GFF1844	0.90	-1.3
1,869,429	-				-0.7
1,869,429	-				-0.2
1,869,431	-				-0.3
1,869,436	-				-2.1
1,869,437	+				+0.1
1,869,444	+				-0.6
1,869,463	+				+1.5
1,869,471	-				+0.4
1,869,474	+				+2.0
1,869,482	-				+0.9
1,869,495	-				+0.4
1,869,507	+				-0.2
1,869,508	+				-1.5
1,869,521	-				+0.2
1,869,533	-				+0.4
1,869,540	+				-0.9
1,869,548	-				+0.7
1,869,548	-				-0.6
1,869,555	+		GFF1845	0.11	-0.2
1,869,555	+		GFF1845	0.11	+0.4
1,869,560	+		GFF1845	0.12	+0.9
1,869,568	+		GFF1845	0.13	+0.4
1,869,568	+		GFF1845	0.13	-0.2
1,869,568	+		GFF1845	0.13	+1.8
1,869,576	-		GFF1845	0.14	+0.3
1,869,576	-		GFF1845	0.14	-2.7
1,869,576	-		GFF1845	0.14	-0.3
1,869,576	-		GFF1845	0.14	-0.6
1,869,576	-		GFF1845	0.14	+0.4
1,869,576	-		GFF1845	0.14	-1.3
1,869,576	-		GFF1845	0.14	-1.2
1,869,576	-		GFF1845	0.14	-0.5
1,869,578	+		GFF1845	0.15	-1.0
1,869,586	-		GFF1845	0.16	-1.3
1,869,586	-		GFF1845	0.16	-0.6
1,869,593	-		GFF1845	0.17	-1.5
1,869,597	+		GFF1845	0.18	-0.8
1,869,597	+		GFF1845	0.18	-1.6
1,869,597	+		GFF1845	0.18	+1.0
1,869,605	-		GFF1845	0.19	-2.0
1,869,612	+		GFF1845	0.20	+1.2
1,869,627	-		GFF1845	0.23	-0.9
1,869,628	+		GFF1845	0.23	+0.5
1,869,637	-		GFF1845	0.25	+1.4
1,869,647	-		GFF1845	0.26	+0.3
1,869,651	+		GFF1845	0.27	+0.1
1,869,685	+		GFF1845	0.33	+0.6
1,869,695	+		GFF1845	0.34	-0.3
1,869,695	+		GFF1845	0.34	-1.5
1,869,695	+		GFF1845	0.34	-1.0
1,869,695	+		GFF1845	0.34	-0.6
1,869,695	+		GFF1845	0.34	-1.2
1,869,695	+		GFF1845	0.34	+0.2
1,869,703	-		GFF1845	0.36	-0.7
1,869,703	-		GFF1845	0.36	-0.2
1,869,703	-		GFF1845	0.36	+0.2
1,869,703	-		GFF1845	0.36	-0.5
1,869,703	-		GFF1845	0.36	-1.2
1,869,703	-		GFF1845	0.36	+0.2
1,869,703	-		GFF1845	0.36	-1.0
1,869,703	-		GFF1845	0.36	+1.0
1,869,703	-		GFF1845	0.36	-0.9
1,869,703	-		GFF1845	0.36	-0.3
1,869,703	-		GFF1845	0.36	+0.4
1,869,703	-		GFF1845	0.36	-0.3
1,869,703	-		GFF1845	0.36	-0.1
1,869,703	-		GFF1845	0.36	-0.1
1,869,703	-		GFF1845	0.36	-0.2
1,869,703	-		GFF1845	0.36	-2.0
1,869,703	-		GFF1845	0.36	-0.6
1,869,703	-		GFF1845	0.36	-0.2
1,869,705	-		GFF1845	0.36	-1.5
1,869,719	-		GFF1845	0.38	+0.8
1,869,719	-		GFF1845	0.38	-0.5
1,869,738	+		GFF1845	0.41	+0.7
1,869,746	-		GFF1845	0.43	-0.6
1,869,746	-		GFF1845	0.43	-1.6
1,869,750	+		GFF1845	0.43	+0.8
1,869,758	-		GFF1845	0.45	-0.1
1,869,758	-		GFF1845	0.45	-0.8
1,869,766	-		GFF1845	0.46	+0.2
1,869,776	-		GFF1845	0.48	+0.3
1,869,796	-		GFF1845	0.51	-0.2
1,869,832	-		GFF1845	0.57	+0.2
1,869,869	+		GFF1845	0.63	-0.1
1,869,880	+		GFF1845	0.65	-0.2
1,869,888	-		GFF1845	0.67	+0.1
1,869,889	+		GFF1845	0.67	+0.8
1,869,897	-		GFF1845	0.68	+0.5
1,869,921	-		GFF1845	0.72	+0.3
1,869,929	+		GFF1845	0.73	+0.3
1,869,936	+		GFF1845	0.74	-0.6
1,869,942	+		GFF1845	0.76	-0.9
1,869,944	-		GFF1845	0.76	+1.4
1,869,944	-		GFF1845	0.76	-1.1
1,869,944	-		GFF1845	0.76	-0.6
1,869,944	-		GFF1845	0.76	-0.2
1,869,981	+		GFF1845	0.82	-0.9
1,869,996	+		GFF1845	0.84	-2.5
1,870,001	+		GFF1845	0.85	+0.8
1,870,001	+		GFF1845	0.85	+1.1
1,870,009	-		GFF1845	0.87	-0.7
1,870,016	-		GFF1845	0.88	-1.3
1,870,030	+				-0.9
1,870,030	+				-0.8
1,870,038	-				-0.3
1,870,039	-				+0.4
1,870,040	+				+0.0
1,870,040	+				-0.1
1,870,040	+				+0.5
1,870,040	+				+1.4
1,870,040	+				-0.7
1,870,040	+				-1.8
1,870,040	+				+1.2
1,870,040	+				+0.4
1,870,040	+				-1.2
1,870,040	+				+0.1
1,870,040	+				+0.8
1,870,040	+				-1.6
1,870,040	+				-1.5
1,870,040	+				+0.6
1,870,040	+				+0.8
1,870,045	+				-0.4
1,870,048	-				+0.5
1,870,048	-				+0.5
1,870,048	-				+1.0
1,870,048	-				-0.7
1,870,048	-				+0.5
1,870,048	-				-1.0
1,870,048	-				-0.3
1,870,048	-				-0.9
1,870,048	-				-0.7
1,870,048	-				+0.7
1,870,048	-				-0.1
1,870,048	-				-0.1
1,870,049	+				+0.2
1,870,049	+				-1.2
1,870,050	+				-2.0
1,870,050	+				-1.0
1,870,050	+				-1.1
1,870,050	+				-2.2
1,870,050	+				+0.8
1,870,050	+				+0.8
1,870,050	+				-1.4
1,870,053	-				-0.6
1,870,055	+				-1.5
1,870,055	+				+1.6
1,870,055	+				+0.5
1,870,055	+				-0.3
1,870,055	+				+0.4
1,870,055	+				+0.4
1,870,055	+				-0.5
1,870,055	+				-0.4
1,870,055	+				+0.4
1,870,055	+				+2.4
1,870,055	+				+0.2
1,870,055	+				-0.2
1,870,055	+				-0.1
1,870,058	-				+0.7
1,870,058	-				-1.1
1,870,058	-				+0.4
1,870,063	-				-1.5
1,870,063	-				-0.2
1,870,063	-				-1.9
1,870,063	-				+0.1
1,870,063	-				+0.4
1,870,063	-				-1.4
1,870,063	-				-0.3
1,870,063	-				+0.3
1,870,063	-				-0.6
1,870,073	-				+0.2
1,870,073	-				-0.1
1,870,073	-				+0.4
1,870,076	+				+0.7
1,870,084	-				+0.6
1,870,094	+				-0.7
1,870,096	+				-0.5
1,870,096	+				-0.6
1,870,096	+				-0.6
1,870,096	+				-0.9
1,870,096	-				-1.2
1,870,101	+				+0.8
1,870,101	+				+0.9
1,870,104	-				-0.1
1,870,104	-				-0.2
1,870,104	-				-1.4
1,870,117	+				+0.9
1,870,123	-				-0.8
1,870,132	+				+0.2
1,870,140	-				-0.3
1,870,140	-				+0.6
1,870,143	+				-1.7
1,870,153	+				-0.1
1,870,153	+				+0.0
1,870,153	+				-1.3
1,870,153	+				-0.6
1,870,161	-				+0.2
1,870,161	-				-0.7
1,870,161	-				+0.7
1,870,161	-				-0.5
1,870,174	-				-0.6
1,870,180	-				+1.1
1,870,235	+				+0.7
1,870,243	-				-0.7
1,870,285	+				+0.1
1,870,401	+				-1.0
1,870,409	-				-0.9
1,870,409	-				+0.7
1,870,409	-				-0.2
1,870,409	-				-2.6
1,870,423	-				-1.3
1,870,436	-				-0.2
1,870,436	-				-0.5
1,870,436	-				-0.7
1,870,438	+				-0.6
1,870,461	+				-0.4
1,870,466	+				-0.8
1,870,488	+				-0.2
1,870,496	+				+0.7
1,870,526	-				-0.3
1,870,545	+				-0.9
1,870,550	+				-2.0
1,870,550	+				-0.2
1,870,550	-				-0.6
1,870,557	+				-0.9
1,870,566	-				-1.1
1,870,567	+				+2.0
1,870,575	-				-0.1
1,870,615	-		GFF1846	0.11	+0.5
1,870,615	-		GFF1846	0.11	+1.4
1,870,623	-		GFF1846	0.12	+0.7
1,870,632	-		GFF1846	0.12	+0.8
1,870,639	-		GFF1846	0.12	-1.0
1,870,652	+		GFF1846	0.13	+0.4
1,870,652	+		GFF1846	0.13	-1.5
1,870,652	+		GFF1846	0.13	-0.7
1,870,652	+		GFF1846	0.13	+0.3
1,870,660	-		GFF1846	0.13	+0.4
1,870,660	-		GFF1846	0.13	-0.2
1,870,667	+		GFF1846	0.13	-1.1
1,870,667	+		GFF1846	0.13	-1.5
1,870,667	+		GFF1846	0.13	-0.9
1,870,672	+		GFF1846	0.13	-1.0
1,870,672	+		GFF1846	0.13	-1.0
1,870,672	+		GFF1846	0.13	-1.5
1,870,672	+		GFF1846	0.13	+0.7
1,870,672	+		GFF1846	0.13	-0.6
1,870,672	+		GFF1846	0.13	-1.8
1,870,672	+		GFF1846	0.13	-1.0
1,870,672	+		GFF1846	0.13	-0.6
1,870,672	+		GFF1846	0.13	+0.8
1,870,675	-		GFF1846	0.14	-0.1
1,870,677	+		GFF1846	0.14	+0.5
1,870,680	-		GFF1846	0.14	-0.1
1,870,680	-		GFF1846	0.14	-0.9
1,870,680	-		GFF1846	0.14	-1.9
1,870,680	-		GFF1846	0.14	+0.9
1,870,680	-		GFF1846	0.14	-1.4
1,870,680	-		GFF1846	0.14	-1.2
1,870,680	-		GFF1846	0.14	-1.1
1,870,680	-		GFF1846	0.14	-1.1
1,870,680	-		GFF1846	0.14	-1.1
1,870,680	-		GFF1846	0.14	+1.4
1,870,680	-		GFF1846	0.14	+0.1
1,870,680	-		GFF1846	0.14	+0.4
1,870,680	-		GFF1846	0.14	-0.9
1,870,680	-		GFF1846	0.14	-1.5
1,870,680	-		GFF1846	0.14	-2.1
1,870,680	-		GFF1846	0.14	-0.1
1,870,680	-		GFF1846	0.14	+0.8
1,870,685	-		GFF1846	0.14	-0.2
1,870,685	-		GFF1846	0.14	-0.6
1,870,688	-		GFF1846	0.14	-0.6
1,870,690	+		GFF1846	0.14	+1.1
1,870,690	+		GFF1846	0.14	-0.1
1,870,690	-		GFF1846	0.14	-0.2
1,870,693	-		GFF1846	0.14	-0.5
1,870,698	-		GFF1846	0.14	-0.2
1,870,698	-		GFF1846	0.14	-1.2
1,870,698	-		GFF1846	0.14	-0.6
1,870,698	-		GFF1846	0.14	-0.5
1,870,756	+		GFF1846	0.16	-0.3
1,870,756	+		GFF1846	0.16	-0.1
1,870,756	+		GFF1846	0.16	+1.0
1,870,756	+		GFF1846	0.16	-1.3
1,870,759	-		GFF1846	0.16	-0.5
1,870,764	-		GFF1846	0.17	-0.2
1,870,764	-		GFF1846	0.17	+0.3
1,870,764	-		GFF1846	0.17	-2.0
1,870,764	-		GFF1846	0.17	-0.6
1,870,766	+		GFF1846	0.17	-1.1
1,870,766	+		GFF1846	0.17	-0.2
1,870,766	+		GFF1846	0.17	-0.6
1,870,772	-		GFF1846	0.17	+0.0
1,870,776	+		GFF1846	0.17	-1.8
1,870,784	-		GFF1846	0.17	-2.2
1,870,803	+		GFF1846	0.18	-0.2
1,870,808	+		GFF1846	0.18	-0.2
1,870,808	+		GFF1846	0.18	-0.1
1,870,808	+		GFF1846	0.18	-1.7
1,870,808	+		GFF1846	0.18	-0.9
1,870,808	+		GFF1846	0.18	-0.9
1,870,808	+		GFF1846	0.18	+0.6
1,870,808	+		GFF1846	0.18	-2.2
1,870,808	+		GFF1846	0.18	-2.6
1,870,816	-		GFF1846	0.19	-0.9
1,870,816	-		GFF1846	0.19	-1.8
1,870,816	-		GFF1846	0.19	-0.1
1,870,816	-		GFF1846	0.19	-0.7
1,870,816	-		GFF1846	0.19	-0.1
1,870,816	-		GFF1846	0.19	+0.1
1,870,816	-		GFF1846	0.19	+0.7
1,870,816	-		GFF1846	0.19	-1.7
1,870,816	-		GFF1846	0.19	-1.4
1,870,816	-		GFF1846	0.19	+1.9
1,870,821	-		GFF1846	0.19	-0.6
1,870,821	-		GFF1846	0.19	-0.1
1,870,836	+		GFF1846	0.19	-0.5
1,870,836	-		GFF1846	0.19	-0.9
1,870,845	-		GFF1846	0.20	-0.3
1,870,858	+		GFF1846	0.20	+0.5
1,870,859	+		GFF1846	0.20	+1.0
1,870,866	+		GFF1846	0.20	-0.7
1,870,866	+		GFF1846	0.20	-1.3
1,870,874	-		GFF1846	0.21	+0.7
1,870,874	-		GFF1846	0.21	-1.5
1,870,876	+		GFF1846	0.21	-0.6
1,870,899	+		GFF1846	0.21	+0.7
1,870,941	-		GFF1846	0.23	-1.3
1,870,946	-		GFF1846	0.23	+0.7
1,870,949	+		GFF1846	0.23	-1.8
1,870,960	+		GFF1846	0.24	-1.1
1,870,978	+		GFF1846	0.24	-0.3
1,870,978	+		GFF1846	0.24	-0.7
1,870,978	+		GFF1846	0.24	-1.4
1,870,978	+		GFF1846	0.24	-0.3
1,870,978	+		GFF1846	0.24	-0.2
1,871,012	+		GFF1846	0.25	-2.6
1,871,020	-		GFF1846	0.26	+0.6
1,871,020	-		GFF1846	0.26	-0.8
1,871,020	-		GFF1846	0.26	-1.3
1,871,022	+		GFF1846	0.26	+0.5
1,871,022	-		GFF1846	0.26	+0.4
1,871,030	-		GFF1846	0.26	-0.5
1,871,035	-		GFF1846	0.26	-0.5
1,871,037	+		GFF1846	0.26	-1.5
1,871,044	-		GFF1846	0.27	-0.6
1,871,045	-		GFF1846	0.27	-0.8
1,871,048	+		GFF1846	0.27	+0.7
1,871,078	-		GFF1846	0.28	+0.1