Strain Fitness in Sphingobium sp. HT1-2 around GFF1215

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,235,883	-		GFF1214	0.44	-1.1
1,235,914	-		GFF1214	0.46	-1.5
1,235,920	-		GFF1214	0.46	-0.3
1,235,920	-		GFF1214	0.46	+0.1
1,235,929	+		GFF1214	0.47	-0.4
1,235,929	+		GFF1214	0.47	-0.3
1,235,929	+		GFF1214	0.47	+1.8
1,235,937	-		GFF1214	0.47	+0.1
1,235,937	-		GFF1214	0.47	-1.2
1,235,937	-		GFF1214	0.47	+1.0
1,235,942	-		GFF1214	0.48	-2.0
1,235,950	-		GFF1214	0.48	-0.5
1,235,950	-		GFF1214	0.48	-0.3
1,235,950	-		GFF1214	0.48	-1.5
1,235,952	+		GFF1214	0.48	+1.3
1,236,027	+		GFF1214	0.53	-1.2
1,236,042	+		GFF1214	0.54	-0.6
1,236,045	-		GFF1214	0.54	-1.1
1,236,047	+		GFF1214	0.54	+0.7
1,236,051	+		GFF1214	0.54	-1.6
1,236,138	+		GFF1214	0.59	+0.3
1,236,145	+		GFF1214	0.60	+0.1
1,236,146	-		GFF1214	0.60	+0.8
1,236,146	-		GFF1214	0.60	-0.2
1,236,151	+		GFF1214	0.60	+0.6
1,236,153	-		GFF1214	0.60	+0.9
1,236,157	+		GFF1214	0.60	-0.7
1,236,158	+		GFF1214	0.60	+0.7
1,236,159	-		GFF1214	0.61	-0.9
1,236,165	-		GFF1214	0.61	-0.6
1,236,184	+		GFF1214	0.62	+0.2
1,236,185	+		GFF1214	0.62	-0.3
1,236,199	+		GFF1214	0.63	-1.0
1,236,220	-		GFF1214	0.64	-0.2
1,236,230	+		GFF1214	0.65	-1.7
1,236,230	-		GFF1214	0.65	-0.5
1,236,230	-		GFF1214	0.65	-1.5
1,236,238	-		GFF1214	0.65	-1.7
1,236,261	+		GFF1214	0.67	+0.2
1,236,269	-		GFF1214	0.67	-0.8
1,236,272	+		GFF1214	0.67	-0.5
1,236,279	+		GFF1214	0.68	+1.0
1,236,279	+		GFF1214	0.68	-0.1
1,236,280	-		GFF1214	0.68	-0.9
1,236,287	-		GFF1214	0.68	-0.3
1,236,303	+		GFF1214	0.69	+0.4
1,236,310	+		GFF1214	0.70	+0.2
1,236,310	-		GFF1214	0.70	-1.2
1,236,310	-		GFF1214	0.70	-0.3
1,236,315	+		GFF1214	0.70	-0.5
1,236,318	-		GFF1214	0.70	-0.4
1,236,321	+		GFF1214	0.70	-2.0
1,236,324	+		GFF1214	0.70	-1.4
1,236,356	-		GFF1214	0.72	-0.7
1,236,377	+		GFF1214	0.74	-0.5
1,236,377	+		GFF1214	0.74	-0.0
1,236,377	+		GFF1214	0.74	-1.0
1,236,381	+		GFF1214	0.74	-1.2
1,236,382	+		GFF1214	0.74	+0.8
1,236,383	+		GFF1214	0.74	+0.4
1,236,385	-		GFF1214	0.74	+1.0
1,236,389	-		GFF1214	0.74	-1.0
1,236,389	-		GFF1214	0.74	+0.1
1,236,436	+		GFF1214	0.77	-1.8
1,236,442	+		GFF1214	0.78	-0.9
1,236,444	-		GFF1214	0.78	-1.5
1,236,444	-		GFF1214	0.78	-1.0
1,236,472	+		GFF1214	0.79	-0.7
1,236,472	+		GFF1214	0.79	+0.8
1,236,472	+		GFF1214	0.79	+1.4
1,236,472	+		GFF1214	0.79	+0.2
1,236,472	+		GFF1214	0.79	+0.6
1,236,472	+		GFF1214	0.79	-0.2
1,236,472	+		GFF1214	0.79	-1.8
1,236,480	-		GFF1214	0.80	-0.9
1,236,480	-		GFF1214	0.80	-1.8
1,236,480	-		GFF1214	0.80	+0.9
1,236,480	-		GFF1214	0.80	-2.0
1,236,480	-		GFF1214	0.80	-1.0
1,236,480	-		GFF1214	0.80	-0.5
1,236,480	-		GFF1214	0.80	-1.0
1,236,480	-		GFF1214	0.80	+0.2
1,236,480	-		GFF1214	0.80	-0.6
1,236,480	-		GFF1214	0.80	+0.1
1,236,480	-		GFF1214	0.80	+0.3
1,236,480	-		GFF1214	0.80	-0.3
1,236,498	+		GFF1214	0.81	-1.0
1,236,530	+		GFF1214	0.83	-0.5
1,236,530	+		GFF1214	0.83	-1.9
1,236,530	+		GFF1214	0.83	-1.6
1,236,530	+		GFF1214	0.83	-1.7
1,236,530	+		GFF1214	0.83	-1.0
1,236,530	+		GFF1214	0.83	-0.4
1,236,538	-		GFF1214	0.83	-0.5
1,236,538	-		GFF1214	0.83	-0.5
1,236,538	-		GFF1214	0.83	-0.1
1,236,538	-		GFF1214	0.83	+0.6
1,236,558	+		GFF1214	0.84	-0.4
1,236,558	+		GFF1214	0.84	-0.2
1,236,558	+		GFF1214	0.84	-1.1
1,236,558	+		GFF1214	0.84	+0.3
1,236,563	+		GFF1214	0.85	-0.5
1,236,566	-		GFF1214	0.85	-0.9
1,236,566	-		GFF1214	0.85	-0.7
1,236,566	-		GFF1214	0.85	-0.9
1,236,566	-		GFF1214	0.85	+0.5
1,236,568	+		GFF1214	0.85	-1.2
1,236,568	+		GFF1214	0.85	-0.8
1,236,570	+		GFF1214	0.85	-1.1
1,236,570	+		GFF1214	0.85	+0.2
1,236,570	+		GFF1214	0.85	-0.2
1,236,570	+		GFF1214	0.85	-0.8
1,236,570	+		GFF1214	0.85	-0.0
1,236,570	+		GFF1214	0.85	-0.8
1,236,570	+		GFF1214	0.85	-1.8
1,236,570	+		GFF1214	0.85	-0.4
1,236,573	-		GFF1214	0.85	-1.5
1,236,576	-		GFF1214	0.86	-0.6
1,236,578	-		GFF1214	0.86	+0.9
1,236,578	-		GFF1214	0.86	-0.6
1,236,578	-		GFF1214	0.86	-1.9
1,236,578	-		GFF1214	0.86	-1.4
1,236,578	-		GFF1214	0.86	+0.3
1,236,578	-		GFF1214	0.86	+0.4
1,236,578	-		GFF1214	0.86	+0.6
1,236,578	-		GFF1214	0.86	-0.2
1,236,578	-		GFF1214	0.86	+0.4
1,236,578	-		GFF1214	0.86	-0.7
1,236,586	+		GFF1214	0.86	+0.3
1,236,596	+		GFF1214	0.87	-1.0
1,236,625	+		GFF1214	0.88	-1.4
1,236,626	+		GFF1214	0.89	-1.1
1,236,630	+		GFF1214	0.89	-0.6
1,236,630	+		GFF1214	0.89	-0.1
1,236,632	+		GFF1214	0.89	-0.1
1,236,635	+		GFF1214	0.89	-1.0
1,236,637	+		GFF1214	0.89	-0.5
1,236,640	-		GFF1214	0.89	-0.2
1,236,701	-				-2.2
1,236,701	-				-0.2
1,236,704	-				-1.0
1,236,706	+				-0.7
1,236,708	+				+1.0
1,236,714	-				+0.3
1,236,714	-				+1.2
1,236,716	-				+1.3
1,236,787	+				-1.5
1,236,787	+				+0.7
1,236,787	+				+0.3
1,236,787	+				-0.6
1,236,795	-				-0.6
1,236,795	-				-0.2
1,236,795	-				-0.8
1,236,824	+				-1.4
1,236,824	+				+0.1
1,236,825	-				-0.7
1,236,832	-				+0.6
1,236,832	-				-0.4
1,236,832	-				+0.0
1,236,832	-				-1.6
1,236,832	-				-1.6
1,236,832	-				+0.3
1,236,851	-				-1.3
1,236,892	+				-1.2
1,236,900	-				-1.0
1,236,900	-				-0.5
1,236,900	-				-1.0
1,236,920	-				-0.0
1,236,942	+		GFF1215	0.10	-0.7
1,236,959	+		GFF1215	0.12	-0.9
1,236,959	+		GFF1215	0.12	-0.3
1,236,959	+		GFF1215	0.12	-0.1
1,236,969	+		GFF1215	0.13	-2.0
1,236,977	-		GFF1215	0.14	-0.4
1,236,992	+		GFF1215	0.15	+0.6
1,236,992	+		GFF1215	0.15	-0.3
1,237,016	+		GFF1215	0.18	-0.1
1,237,017	+		GFF1215	0.18	+0.1
1,237,017	+		GFF1215	0.18	-1.0
1,237,025	-		GFF1215	0.19	-2.0
1,237,044	+		GFF1215	0.21	-0.0
1,237,044	+		GFF1215	0.21	-0.3
1,237,044	+		GFF1215	0.21	-1.0
1,237,044	+		GFF1215	0.21	-0.8
1,237,044	+		GFF1215	0.21	-0.7
1,237,044	+		GFF1215	0.21	-0.9
1,237,049	+		GFF1215	0.21	-0.6
1,237,052	-		GFF1215	0.21	-0.8
1,237,052	-		GFF1215	0.21	+1.1
1,237,052	-		GFF1215	0.21	-0.2
1,237,052	-		GFF1215	0.21	-0.9
1,237,062	-		GFF1215	0.22	-0.9
1,237,065	+		GFF1215	0.23	-0.6
1,237,085	-		GFF1215	0.25	-0.2
1,237,085	-		GFF1215	0.25	-0.2
1,237,119	+		GFF1215	0.28	-0.0
1,237,119	+		GFF1215	0.28	-0.4
1,237,119	+		GFF1215	0.28	-1.4
1,237,119	+		GFF1215	0.28	-0.7
1,237,127	-		GFF1215	0.29	+0.1
1,237,127	-		GFF1215	0.29	-0.4
1,237,127	-		GFF1215	0.29	-0.1
1,237,145	+		GFF1215	0.31	-0.8
1,237,145	+		GFF1215	0.31	+0.8
1,237,148	-		GFF1215	0.31	-0.1
1,237,153	-		GFF1215	0.31	+1.6
1,237,153	-		GFF1215	0.31	+0.2
1,237,173	+		GFF1215	0.33	-0.5
1,237,193	+		GFF1215	0.35	+0.9
1,237,203	+		GFF1215	0.36	-0.2
1,237,203	+		GFF1215	0.36	-0.7
1,237,208	+		GFF1215	0.37	-1.0
1,237,216	-		GFF1215	0.38	-1.5
1,237,216	-		GFF1215	0.38	+0.7
1,237,221	-		GFF1215	0.38	-1.0
1,237,244	+		GFF1215	0.40	+1.0
1,237,272	+		GFF1215	0.43	-0.3
1,237,317	+		GFF1215	0.48	-1.2
1,237,332	+		GFF1215	0.49	+1.3
1,237,406	+		GFF1215	0.56	+0.3
1,237,421	-		GFF1215	0.58	+0.2
1,237,440	+		GFF1215	0.60	-1.9
1,237,440	+		GFF1215	0.60	-0.1
1,237,465	+		GFF1215	0.62	-1.0
1,237,469	-		GFF1215	0.63	-0.9
1,237,472	+		GFF1215	0.63	-0.4
1,237,481	-		GFF1215	0.64	+1.5
1,237,518	+		GFF1215	0.67	-1.4
1,237,518	+		GFF1215	0.67	-0.2
1,237,526	-		GFF1215	0.68	+0.9
1,237,534	+		GFF1215	0.69	-0.0
1,237,548	+		GFF1215	0.70	-1.2
1,237,576	+		GFF1215	0.73	+0.8
1,237,587	+		GFF1215	0.74	-0.7
1,237,592	+		GFF1215	0.75	-0.4
1,237,592	+		GFF1215	0.75	-0.3
1,237,592	+		GFF1215	0.75	+0.3
1,237,592	+		GFF1215	0.75	-0.4
1,237,592	+		GFF1215	0.75	+0.1
1,237,595	-		GFF1215	0.75	-0.2
1,237,595	-		GFF1215	0.75	+0.2
1,237,595	-		GFF1215	0.75	-1.0
1,237,600	-		GFF1215	0.76	-1.7
1,237,600	-		GFF1215	0.76	-0.9
1,237,600	-		GFF1215	0.76	-1.6
1,237,600	-		GFF1215	0.76	-1.5
1,237,600	-		GFF1215	0.76	-0.7
1,237,600	-		GFF1215	0.76	-1.1
1,237,623	+		GFF1215	0.78	-0.2
1,237,631	-		GFF1215	0.79	-0.3
1,237,633	+		GFF1215	0.79	-0.5
1,237,635	+		GFF1215	0.79	+0.4
1,237,639	+		GFF1215	0.79	-0.2
1,237,645	+		GFF1215	0.80	-1.6
1,237,645	+		GFF1215	0.80	-0.2
1,237,645	+		GFF1215	0.80	-0.6
1,237,645	+		GFF1215	0.80	-2.7
1,237,645	+		GFF1215	0.80	-0.8
1,237,645	+		GFF1215	0.80	-0.2
1,237,645	+		GFF1215	0.80	-0.8
1,237,646	+		GFF1215	0.80	+1.2
1,237,647	+		GFF1215	0.80	-0.5
1,237,652	+		GFF1215	0.81	+0.7
1,237,652	+		GFF1215	0.81	-3.0
1,237,652	+		GFF1215	0.81	-1.2
1,237,652	+		GFF1215	0.81	-0.2
1,237,652	+		GFF1215	0.81	-1.8
1,237,653	-		GFF1215	0.81	+0.0
1,237,653	-		GFF1215	0.81	-0.4
1,237,653	-		GFF1215	0.81	-0.4
1,237,653	-		GFF1215	0.81	+0.9
1,237,653	-		GFF1215	0.81	+0.5
1,237,653	-		GFF1215	0.81	-0.2
1,237,660	-		GFF1215	0.82	+0.0
1,237,660	-		GFF1215	0.82	+0.6
1,237,660	-		GFF1215	0.82	-0.4
1,237,660	-		GFF1215	0.82	-0.0
1,237,661	-		GFF1215	0.82	-0.8
1,237,677	-		GFF1215	0.83	-1.4
1,237,687	-		GFF1215	0.84	+0.1
1,237,711	+		GFF1215	0.87	+0.2
1,237,723	-		GFF1215	0.88	-1.0
1,237,733	-		GFF1215	0.89	-0.2
1,237,758	+				-0.3
1,237,758	+				-0.2
1,237,758	+				+0.3
1,237,758	-				-1.8
1,237,766	-				+0.2
1,237,780	+				-0.1
1,237,780	+				-1.0
1,237,788	-				+0.1
1,237,815	-				+0.5
1,237,823	-				-0.9
1,237,843	-				-1.2
1,237,885	+		GFF1216	0.11	-1.8
1,237,885	+		GFF1216	0.11	-0.7
1,237,885	+		GFF1216	0.11	-0.6
1,237,885	+		GFF1216	0.11	+0.4
1,237,885	+		GFF1216	0.11	+0.2
1,237,890	+		GFF1216	0.12	-1.2
1,237,890	+		GFF1216	0.12	-0.5
1,237,893	-		GFF1216	0.12	-0.4
1,237,893	-		GFF1216	0.12	-1.4
1,237,893	-		GFF1216	0.12	+1.1
1,237,893	-		GFF1216	0.12	-0.7
1,237,893	-		GFF1216	0.12	+1.2
1,237,893	-		GFF1216	0.12	-0.4
1,237,893	-		GFF1216	0.12	+0.5
1,237,893	-		GFF1216	0.12	-1.5
1,237,893	-		GFF1216	0.12	+0.5
1,237,893	-		GFF1216	0.12	+0.2
1,237,893	-		GFF1216	0.12	-0.2
1,237,895	+		GFF1216	0.13	-1.8
1,237,896	-		GFF1216	0.13	-0.7
1,237,898	-		GFF1216	0.13	-2.0
1,237,898	-		GFF1216	0.13	+0.6
1,237,903	+		GFF1216	0.14	+0.5
1,237,903	-		GFF1216	0.14	-0.4
1,237,923	-		GFF1216	0.19	-1.2
1,237,928	-		GFF1216	0.20	-0.0
1,237,936	+		GFF1216	0.22	+1.4
1,237,944	-		GFF1216	0.23	+0.0
1,237,961	+		GFF1216	0.27	+0.1
1,237,961	+		GFF1216	0.27	-1.6
1,237,969	-		GFF1216	0.29	-1.7
1,237,986	+		GFF1216	0.32	+1.1
1,237,987	+		GFF1216	0.32	-1.8
1,237,994	-		GFF1216	0.34	+0.3
1,237,994	-		GFF1216	0.34	+0.5
1,237,994	-		GFF1216	0.34	-0.7
1,238,059	+		GFF1216	0.48	-0.5
1,238,059	+		GFF1216	0.48	-0.7
1,238,059	+		GFF1216	0.48	+0.9
1,238,064	+		GFF1216	0.49	-0.2
1,238,067	-		GFF1216	0.50	-0.6
1,238,067	-		GFF1216	0.50	-0.8
1,238,072	-		GFF1216	0.51	+1.8
1,238,083	+		GFF1216	0.53	+0.1
1,238,091	-		GFF1216	0.55	-0.7
1,238,091	-		GFF1216	0.55	-0.2
1,238,110	-		GFF1216	0.59	+0.8
1,238,128	+		GFF1216	0.63	-0.6
1,238,136	-		GFF1216	0.65	-0.8
1,238,146	-		GFF1216	0.67	-0.8
1,238,173	+		GFF1216	0.72	+0.6
1,238,181	-		GFF1216	0.74	-0.3
1,238,186	-		GFF1216	0.75	+0.9
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